Protein–RNA interactions for Protein: A0A5B7

TCRBV4S1A1T, T-cell receptor beta variable 29-1 (Fragment), humanhuman

Predictions only

Length 111 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TCRBV4S1A1TA0A5B7 TRIM7-205ENST00000422067 1954 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
TCRBV4S1A1TA0A5B7 AC013268.5-201ENST00000454928 1959 ntTSL 2 BASIC15.29■□□□□ 0.04
TCRBV4S1A1TA0A5B7 PLCG1-202ENST00000373271 7395 ntAPPRIS ALT1 TSL 1 (best) BASIC15.29■□□□□ 0.04
TCRBV4S1A1TA0A5B7 LINC01356-201ENST00000401018 1819 ntTSL 2 BASIC15.29■□□□□ 0.04
TCRBV4S1A1TA0A5B7 BMP8B-201ENST00000372827 4822 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
TCRBV4S1A1TA0A5B7 TFP1-202ENST00000475455 1573 ntBASIC15.29■□□□□ 0.04
TCRBV4S1A1TA0A5B7 UBE2Q2-204ENST00000561851 1582 ntTSL 2 BASIC15.29■□□□□ 0.04
TCRBV4S1A1TA0A5B7 NOL3-204ENST00000564053 1592 ntAPPRIS ALT2 TSL 2 BASIC15.29■□□□□ 0.04
TCRBV4S1A1TA0A5B7 ACBD4-207ENST00000586346 1579 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
TCRBV4S1A1TA0A5B7 NTMT1-209ENST00000611055 1562 ntAPPRIS P1 TSL 3 BASIC15.29■□□□□ 0.04
TCRBV4S1A1TA0A5B7 KANK4-204ENST00000371153 4665 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
TCRBV4S1A1TA0A5B7 PHF2-202ENST00000375376 3045 ntTSL 5 BASIC15.29■□□□□ 0.04
TCRBV4S1A1TA0A5B7 KXD1-202ENST00000539106 1496 ntAPPRIS P1 TSL 3 BASIC15.29■□□□□ 0.04
TCRBV4S1A1TA0A5B7 TPSB2-203ENST00000612142 1352 ntAPPRIS P5 TSL 1 (best) BASIC15.29■□□□□ 0.04
TCRBV4S1A1TA0A5B7 UNC93B2-201ENST00000285383 730 ntBASIC15.29■□□□□ 0.04
TCRBV4S1A1TA0A5B7 CLDND2-201ENST00000291715 974 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
TCRBV4S1A1TA0A5B7 PMF1-BGLAP-202ENST00000368276 852 ntTSL 3 BASIC15.29■□□□□ 0.04
TCRBV4S1A1TA0A5B7 C1orf50-201ENST00000372525 996 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
TCRBV4S1A1TA0A5B7 Z98884.1-201ENST00000451646 830 ntTSL 3 BASIC15.29■□□□□ 0.04
TCRBV4S1A1TA0A5B7 ZNF599-203ENST00000588760 948 ntTSL 2 BASIC15.29■□□□□ 0.04
TCRBV4S1A1TA0A5B7 AC003005.1-201ENST00000601674 582 ntAPPRIS P5 TSL 2 BASIC15.29■□□□□ 0.04
TCRBV4S1A1TA0A5B7 PGAP1-204ENST00000409475 2443 ntTSL 2 BASIC15.29■□□□□ 0.04
TCRBV4S1A1TA0A5B7 FBXL20-202ENST00000394294 2309 ntTSL 1 (best) BASIC15.29■□□□□ 0.04
TCRBV4S1A1TA0A5B7 GALNT2-201ENST00000366672 4454 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
TCRBV4S1A1TA0A5B7 ACD-202ENST00000393919 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC15.29■□□□□ 0.04
TCRBV4S1A1TA0A5B7 SYTL1-210ENST00000616558 1878 ntAPPRIS P1 TSL 1 (best) BASIC15.29■□□□□ 0.04
TCRBV4S1A1TA0A5B7 AC069544.2-201ENST00000640019 2528 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
TCRBV4S1A1TA0A5B7 GALNT16-204ENST00000553669 1629 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
TCRBV4S1A1TA0A5B7 RAX2-201ENST00000555633 2414 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
TCRBV4S1A1TA0A5B7 ST3GAL3-206ENST00000351035 2377 ntTSL 5 BASIC15.28■□□□□ 0.04
TCRBV4S1A1TA0A5B7 SETD7-202ENST00000404104 1590 ntTSL 2 BASIC15.28■□□□□ 0.04
TCRBV4S1A1TA0A5B7 CCNO-201ENST00000282572 1433 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
TCRBV4S1A1TA0A5B7 ACSS3-201ENST00000261206 2666 ntAPPRIS ALT1 TSL 1 (best) BASIC15.28■□□□□ 0.04
TCRBV4S1A1TA0A5B7 TSHZ3-201ENST00000240587 5176 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
TCRBV4S1A1TA0A5B7 TMEM223-201ENST00000307366 1288 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
TCRBV4S1A1TA0A5B7 VSIG2-202ENST00000403470 1191 ntTSL 2 BASIC15.28■□□□□ 0.04
TCRBV4S1A1TA0A5B7 KRT18P21-201ENST00000515767 1272 ntBASIC15.28■□□□□ 0.04
TCRBV4S1A1TA0A5B7 AZIN1-AS1-215ENST00000522939 644 ntTSL 2 BASIC15.28■□□□□ 0.04
TCRBV4S1A1TA0A5B7 KDM2B-217ENST00000543852 1188 ntTSL 5 BASIC15.28■□□□□ 0.04
TCRBV4S1A1TA0A5B7 TESC-AS1-201ENST00000547006 1053 ntTSL 2 BASIC15.28■□□□□ 0.04
TCRBV4S1A1TA0A5B7 AQP4-AS1-204ENST00000582605 525 ntTSL 4 BASIC15.28■□□□□ 0.04
TCRBV4S1A1TA0A5B7 AC016737.2-201ENST00000609273 358 ntTSL 3 BASIC15.28■□□□□ 0.04
TCRBV4S1A1TA0A5B7 PLCXD1-202ENST00000381663 1863 ntAPPRIS P2 TSL 5 BASIC15.28■□□□□ 0.04
TCRBV4S1A1TA0A5B7 GDF7-201ENST00000272224 9749 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
TCRBV4S1A1TA0A5B7 TEAD2-202ENST00000377214 2440 ntAPPRIS ALT1 TSL 2 BASIC15.28■□□□□ 0.04
TCRBV4S1A1TA0A5B7 WBP2-213ENST00000590221 1745 ntAPPRIS ALT1 TSL 3 BASIC15.28■□□□□ 0.04
TCRBV4S1A1TA0A5B7 KCNMA1-278ENST00000640141 5705 ntAPPRIS ALT2 TSL 5 BASIC15.28■□□□□ 0.04
TCRBV4S1A1TA0A5B7 MELTF-202ENST00000296351 1650 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
TCRBV4S1A1TA0A5B7 UBE2K-203ENST00000445950 2175 ntTSL 1 (best) BASIC15.28■□□□□ 0.04
TCRBV4S1A1TA0A5B7 CCDC34-201ENST00000317945 2109 ntAPPRIS P3 TSL 1 (best) BASIC15.28■□□□□ 0.04
TCRBV4S1A1TA0A5B7 ATPAF2-206ENST00000474627 1564 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
TCRBV4S1A1TA0A5B7 SKP2-208ENST00000546211 1589 ntTSL 5 BASIC15.28■□□□□ 0.04
TCRBV4S1A1TA0A5B7 HOXB9-201ENST00000311177 2581 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
TCRBV4S1A1TA0A5B7 DHRSX-201ENST00000334651 2571 ntAPPRIS P1 TSL 1 (best) BASIC15.28■□□□□ 0.04
TCRBV4S1A1TA0A5B7 AR-209ENST00000613054 3532 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
TCRBV4S1A1TA0A5B7 HEMK1-206ENST00000455834 1499 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.04
TCRBV4S1A1TA0A5B7 LINC02361-201ENST00000538731 1484 ntTSL 2 BASIC15.27■□□□□ 0.04
TCRBV4S1A1TA0A5B7 PITPNC1-201ENST00000299954 6359 ntAPPRIS ALT2 TSL 5 BASIC15.27■□□□□ 0.04
TCRBV4S1A1TA0A5B7 ADNP2-201ENST00000262198 5393 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
TCRBV4S1A1TA0A5B7 IQGAP2-201ENST00000274364 5844 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
TCRBV4S1A1TA0A5B7 GJB6-204ENST00000400066 1927 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
TCRBV4S1A1TA0A5B7 FAM217A-208ENST00000639338 1929 ntTSL 5 BASIC15.27■□□□□ 0.04
TCRBV4S1A1TA0A5B7 ERCC2-203ENST00000391944 2334 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
TCRBV4S1A1TA0A5B7 FAM3A-203ENST00000369641 1359 ntTSL 5 BASIC15.27■□□□□ 0.04
TCRBV4S1A1TA0A5B7 GGPS1-206ENST00000488594 1396 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
TCRBV4S1A1TA0A5B7 HCCS-201ENST00000321143 2277 ntAPPRIS P1 TSL 2 BASIC15.27■□□□□ 0.04
TCRBV4S1A1TA0A5B7 SENP6-201ENST00000327284 2700 ntTSL 2 BASIC15.27■□□□□ 0.04
TCRBV4S1A1TA0A5B7 CD55-201ENST00000314754 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC15.27■□□□□ 0.04
TCRBV4S1A1TA0A5B7 SSC5D-201ENST00000389623 4845 ntAPPRIS P3 TSL 1 (best) BASIC15.27■□□□□ 0.04
TCRBV4S1A1TA0A5B7 SMTN-204ENST00000404574 1735 ntTSL 2 BASIC15.27■□□□□ 0.04
TCRBV4S1A1TA0A5B7 MPC2-201ENST00000271373 798 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.04
TCRBV4S1A1TA0A5B7 FAM210CP-201ENST00000445714 574 ntBASIC15.27■□□□□ 0.04
TCRBV4S1A1TA0A5B7 CHCHD10-202ENST00000484558 1171 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
TCRBV4S1A1TA0A5B7 AC093752.1-201ENST00000511950 605 ntTSL 4 BASIC15.27■□□□□ 0.04
TCRBV4S1A1TA0A5B7 MIXL1-202ENST00000542034 839 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
TCRBV4S1A1TA0A5B7 REXO1L10P-201ENST00000615707 1290 ntBASIC15.27■□□□□ 0.04
TCRBV4S1A1TA0A5B7 SLC6A6-208ENST00000621751 1252 ntTSL 1 (best) BASIC15.27■□□□□ 0.04
TCRBV4S1A1TA0A5B7 POLR1D-203ENST00000399697 2036 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
TCRBV4S1A1TA0A5B7 GGT2-201ENST00000401924 2366 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.03
TCRBV4S1A1TA0A5B7 IL4I1-201ENST00000341114 2349 ntAPPRIS P4 TSL 1 (best) BASIC15.27■□□□□ 0.03
TCRBV4S1A1TA0A5B7 CYP2E1-205ENST00000463117 1912 ntAPPRIS P1 TSL 5 BASIC15.27■□□□□ 0.03
TCRBV4S1A1TA0A5B7 QSOX2-201ENST00000358701 4530 ntAPPRIS P1 TSL 2 BASIC15.27■□□□□ 0.03
TCRBV4S1A1TA0A5B7 MRPL23-AS1-201ENST00000419080 1876 ntTSL 3 BASIC15.27■□□□□ 0.03
TCRBV4S1A1TA0A5B7 RHOT1-202ENST00000354266 2919 ntTSL 1 (best) BASIC15.27■□□□□ 0.03
TCRBV4S1A1TA0A5B7 PRDM8-202ENST00000415738 3124 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
TCRBV4S1A1TA0A5B7 GTF3A-201ENST00000381140 1383 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
TCRBV4S1A1TA0A5B7 RNF146-203ENST00000368314 2369 ntAPPRIS ALT1 TSL 2 BASIC15.26■□□□□ 0.03
TCRBV4S1A1TA0A5B7 AATK-203ENST00000417379 5081 ntAPPRIS ALT2 TSL 1 (best) BASIC15.26■□□□□ 0.03
TCRBV4S1A1TA0A5B7 RPP25-201ENST00000322177 3049 ntAPPRIS P1 BASIC15.26■□□□□ 0.03
TCRBV4S1A1TA0A5B7 FAM189B-204ENST00000368368 2609 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
TCRBV4S1A1TA0A5B7 CORO1A-216ENST00000570045 1622 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
TCRBV4S1A1TA0A5B7 METTL21A-201ENST00000272839 1210 ntTSL 5 BASIC15.26■□□□□ 0.03
TCRBV4S1A1TA0A5B7 HCRT-201ENST00000293330 577 ntAPPRIS P1 TSL 1 (best) BASIC15.26■□□□□ 0.03
TCRBV4S1A1TA0A5B7 CAPN10-203ENST00000352879 862 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
TCRBV4S1A1TA0A5B7 DAB1-202ENST00000371230 1150 ntTSL 5 BASIC15.26■□□□□ 0.03
TCRBV4S1A1TA0A5B7 CCT7-202ENST00000398422 1234 ntTSL 2 BASIC15.26■□□□□ 0.03
TCRBV4S1A1TA0A5B7 ACP1-205ENST00000407983 703 ntTSL 1 (best) BASIC15.26■□□□□ 0.03
TCRBV4S1A1TA0A5B7 NCF1B-202ENST00000432102 930 ntTSL 2 BASIC15.26■□□□□ 0.03
TCRBV4S1A1TA0A5B7 RBM17P1-201ENST00000453646 1190 ntBASIC15.26■□□□□ 0.03
TCRBV4S1A1TA0A5B7 LINC01184-202ENST00000501173 949 ntTSL 5 BASIC15.26■□□□□ 0.03
Retrieved 100 of 98,524 protein–RNA pairs in 30.4 ms