Protein–RNA interactions for Protein: A0A0D9SF12

CCDC163, Coiled-coil domain-containing 163, humanhuman

Predictions only

Length 145 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC163A0A0D9SF12 BTBD9-205ENST00000419706 2034 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
CCDC163A0A0D9SF12 FCER2-205ENST00000597921 1560 ntAPPRIS P2 TSL 1 (best) BASIC18.81■□□□□ 0.6
CCDC163A0A0D9SF12 ABCG4-204ENST00000615496 2459 ntAPPRIS P1 TSL 2 BASIC18.81■□□□□ 0.6
CCDC163A0A0D9SF12 EED-201ENST00000263360 2223 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CCDC163A0A0D9SF12 HEXIM2-201ENST00000307275 1528 ntAPPRIS P1 TSL 2 BASIC18.81■□□□□ 0.6
CCDC163A0A0D9SF12 TFCP2-205ENST00000549867 1727 ntTSL 5 BASIC18.81■□□□□ 0.6
CCDC163A0A0D9SF12 CD1E-211ENST00000368166 1271 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
CCDC163A0A0D9SF12 KRTAP5-6-201ENST00000382160 561 ntAPPRIS P1 BASIC18.81■□□□□ 0.6
CCDC163A0A0D9SF12 CRELD2-202ENST00000403427 1242 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
CCDC163A0A0D9SF12 SEC61G-203ENST00000415949 732 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
CCDC163A0A0D9SF12 TTTY14-203ENST00000447937 920 ntTSL 3 BASIC18.81■□□□□ 0.6
CCDC163A0A0D9SF12 AC079781.3-201ENST00000449110 356 ntBASIC18.81■□□□□ 0.6
CCDC163A0A0D9SF12 AL137026.1-202ENST00000452578 1089 ntTSL 2 BASIC18.81■□□□□ 0.6
CCDC163A0A0D9SF12 TOB2P1-201ENST00000469761 992 ntBASIC18.81■□□□□ 0.6
CCDC163A0A0D9SF12 C7orf49-209ENST00000483029 596 ntTSL 2 BASIC18.81■□□□□ 0.6
CCDC163A0A0D9SF12 AP002469.2-201ENST00000531724 424 ntBASIC18.81■□□□□ 0.6
CCDC163A0A0D9SF12 BMF-207ENST00000559701 630 ntTSL 3 BASIC18.81■□□□□ 0.6
CCDC163A0A0D9SF12 TNFAIP2-209ENST00000560869 4683 ntAPPRIS P1 TSL 5 BASIC18.81■□□□□ 0.6
CCDC163A0A0D9SF12 ANAPC11-217ENST00000579978 575 ntAPPRIS P1 TSL 2 BASIC18.81■□□□□ 0.6
CCDC163A0A0D9SF12 AC015961.2-201ENST00000589281 701 ntTSL 3 BASIC18.81■□□□□ 0.6
CCDC163A0A0D9SF12 CRYZL1-203ENST00000381540 1482 ntTSL 2 BASIC18.81■□□□□ 0.6
CCDC163A0A0D9SF12 ZSCAN1-201ENST00000282326 2054 ntAPPRIS P1 TSL 2 BASIC18.81■□□□□ 0.6
CCDC163A0A0D9SF12 SLC35F5-203ENST00000409342 2284 ntTSL 2 BASIC18.81■□□□□ 0.6
CCDC163A0A0D9SF12 TDRKH-206ENST00000440583 2296 ntTSL 5 BASIC18.81■□□□□ 0.6
CCDC163A0A0D9SF12 NCK2-205ENST00000451463 1795 ntTSL 2 BASIC18.81■□□□□ 0.6
CCDC163A0A0D9SF12 HOXA10-201ENST00000283921 2541 ntAPPRIS P2 TSL 1 (best) BASIC18.8■□□□□ 0.6
CCDC163A0A0D9SF12 TMEM206-205ENST00000535273 2119 ntTSL 2 BASIC18.8■□□□□ 0.6
CCDC163A0A0D9SF12 DUSP15-201ENST00000278979 1732 ntTSL 2 BASIC18.8■□□□□ 0.6
CCDC163A0A0D9SF12 LRRC75A-201ENST00000409083 2656 ntAPPRIS P3 TSL 2 BASIC18.8■□□□□ 0.6
CCDC163A0A0D9SF12 TNFRSF1A-213ENST00000540022 1527 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
CCDC163A0A0D9SF12 UPF1-207ENST00000599848 5311 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
CCDC163A0A0D9SF12 CCDC185-201ENST00000366875 2054 ntAPPRIS P1 BASIC18.8■□□□□ 0.6
CCDC163A0A0D9SF12 LPAR2-203ENST00000586703 1823 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CCDC163A0A0D9SF12 MOS-201ENST00000311923 1041 ntAPPRIS P1 BASIC18.8■□□□□ 0.6
CCDC163A0A0D9SF12 TPM1-203ENST00000317516 738 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
CCDC163A0A0D9SF12 CAPG-203ENST00000409670 1183 ntAPPRIS P1 TSL 5 BASIC18.8■□□□□ 0.6
CCDC163A0A0D9SF12 AC093459.1-201ENST00000444567 481 ntTSL 3 BASIC18.8■□□□□ 0.6
CCDC163A0A0D9SF12 AC104819.1-201ENST00000504587 486 ntBASIC18.8■□□□□ 0.6
CCDC163A0A0D9SF12 FOSL1P1-201ENST00000511041 816 ntBASIC18.8■□□□□ 0.6
CCDC163A0A0D9SF12 VEGFA-222ENST00000520948 1199 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
CCDC163A0A0D9SF12 TPM1-218ENST00000559281 851 ntTSL 5 BASIC18.8■□□□□ 0.6
CCDC163A0A0D9SF12 RNF126P1-202ENST00000569893 925 ntBASIC18.8■□□□□ 0.6
CCDC163A0A0D9SF12 SLC25A6P4-201ENST00000586535 553 ntBASIC18.8■□□□□ 0.6
CCDC163A0A0D9SF12 LITAF-220ENST00000620789 692 ntTSL 5 BASIC18.8■□□□□ 0.6
CCDC163A0A0D9SF12 LAT-204ENST00000395461 1448 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
CCDC163A0A0D9SF12 KREMEN2-206ENST00000575885 1798 ntTSL 2 BASIC18.8■□□□□ 0.6
CCDC163A0A0D9SF12 TRMT2A-204ENST00000439169 2473 ntTSL 5 BASIC18.8■□□□□ 0.6
CCDC163A0A0D9SF12 ARHGEF7-202ENST00000317133 4361 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
CCDC163A0A0D9SF12 OPN3-201ENST00000366554 2620 ntAPPRIS P1 TSL 1 (best) BASIC18.8■□□□□ 0.6
CCDC163A0A0D9SF12 SKP2-208ENST00000546211 1589 ntTSL 5 BASIC18.8■□□□□ 0.6
CCDC163A0A0D9SF12 AC005906.2-207ENST00000639005 1580 ntTSL 5 BASIC18.8■□□□□ 0.6
CCDC163A0A0D9SF12 MAG-201ENST00000361922 2426 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
CCDC163A0A0D9SF12 LTK-202ENST00000355166 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
CCDC163A0A0D9SF12 AGPAT2-201ENST00000371694 1391 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
CCDC163A0A0D9SF12 B3GALNT2-201ENST00000313984 1874 ntTSL 1 (best) BASIC18.8■□□□□ 0.6
CCDC163A0A0D9SF12 CYP2D7-201ENST00000358097 1655 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
CCDC163A0A0D9SF12 FAM182B-201ENST00000376403 1681 ntAPPRIS P5 TSL 1 (best) BASIC18.79■□□□□ 0.6
CCDC163A0A0D9SF12 GLT8D1-206ENST00000478968 1826 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CCDC163A0A0D9SF12 TRIM36-202ENST00000379617 1322 ntTSL 2 BASIC18.79■□□□□ 0.6
CCDC163A0A0D9SF12 ZFC3H1-211ENST00000552037 1484 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
CCDC163A0A0D9SF12 GJA4-201ENST00000342280 1622 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CCDC163A0A0D9SF12 NEU4-205ENST00000407683 2273 ntAPPRIS P1 TSL 2 BASIC18.79■□□□□ 0.6
CCDC163A0A0D9SF12 AC148477.3-202ENST00000376617 1766 ntTSL 2 BASIC18.79■□□□□ 0.6
CCDC163A0A0D9SF12 MAGED2-203ENST00000375053 2066 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
CCDC163A0A0D9SF12 POU4F3-201ENST00000230732 1182 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CCDC163A0A0D9SF12 CCDC134-201ENST00000255784 1270 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CCDC163A0A0D9SF12 CD1E-203ENST00000368156 861 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
CCDC163A0A0D9SF12 AC073111.4-202ENST00000486297 585 ntTSL 4 BASIC18.79■□□□□ 0.6
CCDC163A0A0D9SF12 AC020909.1-201ENST00000599632 1265 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
CCDC163A0A0D9SF12 ISG15-203ENST00000624697 788 ntAPPRIS ALT2 TSL 3 BASIC18.79■□□□□ 0.6
CCDC163A0A0D9SF12 IRF3-202ENST00000377135 1442 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
CCDC163A0A0D9SF12 MRPL2-202ENST00000388752 1588 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CCDC163A0A0D9SF12 PCCB-216ENST00000483687 1727 ntTSL 3 BASIC18.79■□□□□ 0.6
CCDC163A0A0D9SF12 EARS2-206ENST00000563232 1709 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
CCDC163A0A0D9SF12 DTX4-201ENST00000227451 5642 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CCDC163A0A0D9SF12 NRG3-201ENST00000372141 2158 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
CCDC163A0A0D9SF12 SNAP91-211ENST00000520213 2168 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
CCDC163A0A0D9SF12 STK25-234ENST00000535007 2459 ntTSL 2 BASIC18.79■□□□□ 0.6
CCDC163A0A0D9SF12 ACBD4-201ENST00000321854 1806 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CCDC163A0A0D9SF12 PDLIM2-204ENST00000397760 1847 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CCDC163A0A0D9SF12 SLC46A3-202ENST00000380814 2121 ntAPPRIS ALT1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CCDC163A0A0D9SF12 POLR2F-205ENST00000442738 2106 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CCDC163A0A0D9SF12 IRX4-201ENST00000231357 2221 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CCDC163A0A0D9SF12 NCLN-205ENST00000590671 2070 ntTSL 2 BASIC18.78■□□□□ 0.6
CCDC163A0A0D9SF12 CACNB2-203ENST00000352115 1911 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
CCDC163A0A0D9SF12 GAS2L1P1-201ENST00000420145 1480 ntBASIC18.78■□□□□ 0.6
CCDC163A0A0D9SF12 RPL7-202ENST00000396465 1308 ntTSL 3 BASIC18.78■□□□□ 0.6
CCDC163A0A0D9SF12 KCNJ12-202ENST00000583088 5425 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CCDC163A0A0D9SF12 CDC42EP2-201ENST00000279249 2023 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CCDC163A0A0D9SF12 MAFG-202ENST00000392366 1743 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CCDC163A0A0D9SF12 PHPT1-202ENST00000371661 985 ntTSL 5 BASIC18.78■□□□□ 0.6
CCDC163A0A0D9SF12 KCNAB2-205ENST00000378092 1202 ntAPPRIS ALT1 TSL 5 BASIC18.78■□□□□ 0.6
CCDC163A0A0D9SF12 PRSS42-201ENST00000429665 882 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CCDC163A0A0D9SF12 LINC01237-203ENST00000430555 843 ntTSL 4 BASIC18.78■□□□□ 0.6
CCDC163A0A0D9SF12 AP001625.2-201ENST00000442605 575 ntTSL 2 BASIC18.78■□□□□ 0.6
CCDC163A0A0D9SF12 AL611929.1-201ENST00000457340 449 ntTSL 3 BASIC18.78■□□□□ 0.6
CCDC163A0A0D9SF12 MFGE8-203ENST00000542878 1172 ntTSL 2 BASIC18.78■□□□□ 0.6
CCDC163A0A0D9SF12 C14orf144-201ENST00000553757 537 ntTSL 4 BASIC18.78■□□□□ 0.6
CCDC163A0A0D9SF12 BRICD5-203ENST00000566018 555 ntTSL 2 BASIC18.78■□□□□ 0.6
CCDC163A0A0D9SF12 TK1-205ENST00000590862 642 ntTSL 3 BASIC18.78■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 27.9 ms