Protein–RNA interactions for Protein: Q9BYQ6

KRTAP4-11, Keratin-associated protein 4-11, humanhuman

Predictions only

Length 195 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP4-11Q9BYQ6 AC000123.3-201ENST00000624029 4975 ntBASIC1.93□□□□□ -2.1
KRTAP4-11Q9BYQ6 AC138409.1-201ENST00000505001 3598 ntBASIC1.93□□□□□ -2.1
KRTAP4-11Q9BYQ6 ZNF19-201ENST00000288177 3220 ntAPPRIS P1 TSL 1 (best) BASIC1.93□□□□□ -2.1
KRTAP4-11Q9BYQ6 SCMH1-205ENST00000372595 3231 ntTSL 1 (best) BASIC1.93□□□□□ -2.1
KRTAP4-11Q9BYQ6 TEP1-201ENST00000262715 10695 ntAPPRIS P1 TSL 1 (best) BASIC1.93□□□□□ -2.1
KRTAP4-11Q9BYQ6 OPCML-203ENST00000524381 6424 ntTSL 1 (best) BASIC1.93□□□□□ -2.1
KRTAP4-11Q9BYQ6 OR11G2-202ENST00000641682 3786 ntAPPRIS P1 BASIC1.93□□□□□ -2.1
KRTAP4-11Q9BYQ6 SLITRK3-202ENST00000475390 4555 ntAPPRIS P1 TSL 1 (best) BASIC1.93□□□□□ -2.1
KRTAP4-11Q9BYQ6 LINC01427-202ENST00000635258 4566 ntTSL 5 BASIC1.93□□□□□ -2.1
KRTAP4-11Q9BYQ6 CFAP57-201ENST00000372492 4244 ntAPPRIS P1 TSL 5 BASIC1.93□□□□□ -2.1
KRTAP4-11Q9BYQ6 MEF2C-217ENST00000510942 3446 ntTSL 5 BASIC1.93□□□□□ -2.1
KRTAP4-11Q9BYQ6 BBS12-203ENST00000542236 3431 ntAPPRIS P1 TSL 2 BASIC1.93□□□□□ -2.1
KRTAP4-11Q9BYQ6 NASP-224ENST00000537798 3097 ntAPPRIS ALT2 TSL 2 BASIC1.93□□□□□ -2.1
KRTAP4-11Q9BYQ6 NSD2-208ENST00000420906 5109 ntTSL 1 (best) BASIC1.93□□□□□ -2.1
KRTAP4-11Q9BYQ6 NEMP1-201ENST00000300128 5590 ntAPPRIS P1 TSL 1 (best) BASIC1.93□□□□□ -2.1
KRTAP4-11Q9BYQ6 BRIP1-202ENST00000577598 3969 ntAPPRIS ALT2 TSL 5 BASIC1.93□□□□□ -2.1
KRTAP4-11Q9BYQ6 ELP4-229ENST00000640961 8164 ntAPPRIS P2 TSL 1 (best) BASIC1.93□□□□□ -2.1
KRTAP4-11Q9BYQ6 RBFOX2-205ENST00000405409 6932 ntTSL 1 (best) BASIC1.93□□□□□ -2.1
KRTAP4-11Q9BYQ6 AC015813.3-201ENST00000584805 6113 ntTSL 1 (best) BASIC1.93□□□□□ -2.1
KRTAP4-11Q9BYQ6 ZNF317-201ENST00000247956 4073 ntAPPRIS P3 TSL 1 (best) BASIC1.93□□□□□ -2.1
KRTAP4-11Q9BYQ6 NUP214-208ENST00000483497 3275 ntTSL 2 BASIC1.93□□□□□ -2.1
KRTAP4-11Q9BYQ6 ATXN3-203ENST00000393287 6770 ntTSL 1 (best) BASIC1.93□□□□□ -2.1
KRTAP4-11Q9BYQ6 GON4L-217ENST00000615926 7771 ntAPPRIS ALT2 TSL 1 (best) BASIC1.93□□□□□ -2.1
KRTAP4-11Q9BYQ6 ZEB2-244ENST00000638007 9140 ntTSL 5 BASIC1.93□□□□□ -2.1
KRTAP4-11Q9BYQ6 SALL4P2-201ENST00000423288 2910 ntBASIC1.93□□□□□ -2.1
KRTAP4-11Q9BYQ6 PLEKHA5-202ENST00000424268 4391 ntTSL 2 BASIC1.93□□□□□ -2.1
KRTAP4-11Q9BYQ6 PTCD3-201ENST00000254630 6734 ntAPPRIS P1 TSL 1 (best) BASIC1.93□□□□□ -2.1
KRTAP4-11Q9BYQ6 ZNF616-201ENST00000330123 2563 ntTSL 1 (best) BASIC1.93□□□□□ -2.1
KRTAP4-11Q9BYQ6 ZNF583-202ENST00000333201 4916 ntAPPRIS P1 TSL 2 BASIC1.93□□□□□ -2.1
KRTAP4-11Q9BYQ6 NOVA1-204ENST00000465357 3573 ntAPPRIS ALT1 TSL 3 BASIC1.93□□□□□ -2.1
KRTAP4-11Q9BYQ6 SELP-201ENST00000263686 3142 ntAPPRIS P2 TSL 1 (best) BASIC1.93□□□□□ -2.1
KRTAP4-11Q9BYQ6 LINC01963-201ENST00000562038 3148 ntBASIC1.93□□□□□ -2.1
KRTAP4-11Q9BYQ6 UNC5D-206ENST00000453357 7002 ntAPPRIS ALT2 TSL 1 (best) BASIC1.93□□□□□ -2.1
KRTAP4-11Q9BYQ6 RUFY3-201ENST00000226328 4233 ntTSL 1 (best) BASIC1.93□□□□□ -2.1
KRTAP4-11Q9BYQ6 NUTM2B-AS1-212ENST00000610681 4241 ntTSL 1 (best) BASIC1.93□□□□□ -2.1
KRTAP4-11Q9BYQ6 WDR72-208ENST00000614174 4224 ntTSL 2 BASIC1.93□□□□□ -2.1
KRTAP4-11Q9BYQ6 FAM205BP-203ENST00000455647 3752 ntTSL 1 (best) BASIC1.93□□□□□ -2.1
KRTAP4-11Q9BYQ6 TARS-201ENST00000265112 4314 ntAPPRIS P1 TSL 1 (best) BASIC1.93□□□□□ -2.1
KRTAP4-11Q9BYQ6 AC016705.2-202ENST00000559008 6878 ntTSL 3 BASIC1.93□□□□□ -2.1
KRTAP4-11Q9BYQ6 MAP7D3-204ENST00000370663 4446 ntAPPRIS ALT2 TSL 2 BASIC1.92□□□□□ -2.1
KRTAP4-11Q9BYQ6 GHR-209ENST00000612626 4524 ntAPPRIS P1 TSL 5 BASIC1.92□□□□□ -2.1
KRTAP4-11Q9BYQ6 RASA2-201ENST00000286364 5614 ntAPPRIS P2 TSL 1 (best) BASIC1.92□□□□□ -2.1
KRTAP4-11Q9BYQ6 FAM114A1-201ENST00000358869 4050 ntAPPRIS P1 TSL 1 (best) BASIC1.92□□□□□ -2.1
KRTAP4-11Q9BYQ6 SORBS1-210ENST00000371246 6931 ntAPPRIS ALT2 TSL 5 BASIC1.92□□□□□ -2.1
KRTAP4-11Q9BYQ6 NCKAP1-202ENST00000361354 20347 ntAPPRIS P1 TSL 1 (best) BASIC1.92□□□□□ -2.1
KRTAP4-11Q9BYQ6 CENPJ-205ENST00000545981 4299 ntTSL 2 BASIC1.92□□□□□ -2.1
KRTAP4-11Q9BYQ6 RXFP1-201ENST00000307765 3842 ntAPPRIS P1 TSL 1 (best) BASIC1.92□□□□□ -2.1
KRTAP4-11Q9BYQ6 PTPRD-204ENST00000397606 5038 ntTSL 1 (best) BASIC1.92□□□□□ -2.1
KRTAP4-11Q9BYQ6 ANKFY1-201ENST00000341657 7418 ntAPPRIS ALT1 TSL 5 BASIC1.92□□□□□ -2.1
KRTAP4-11Q9BYQ6 NAV2-203ENST00000396085 11000 ntAPPRIS P4 TSL 5 BASIC1.92□□□□□ -2.1
KRTAP4-11Q9BYQ6 POF1B-201ENST00000262753 3941 ntAPPRIS P3 TSL 1 (best) BASIC1.92□□□□□ -2.1
KRTAP4-11Q9BYQ6 ZNF507-201ENST00000311921 7638 ntAPPRIS P1 TSL 1 (best) BASIC1.92□□□□□ -2.1
KRTAP4-11Q9BYQ6 OR56A3-205ENST00000641905 4595 ntAPPRIS P1 BASIC1.92□□□□□ -2.1
KRTAP4-11Q9BYQ6 MID1-204ENST00000380782 3352 ntTSL 1 (best) BASIC1.92□□□□□ -2.1
KRTAP4-11Q9BYQ6 LIPH-201ENST00000296252 4026 ntAPPRIS P1 TSL 1 (best) BASIC1.92□□□□□ -2.1
KRTAP4-11Q9BYQ6 ATG13-203ENST00000524625 4014 ntAPPRIS P1 TSL 1 (best) BASIC1.92□□□□□ -2.1
KRTAP4-11Q9BYQ6 Z94721.2-201ENST00000609590 5310 ntTSL 2 BASIC1.92□□□□□ -2.1
KRTAP4-11Q9BYQ6 RAB27B-201ENST00000262094 7281 ntAPPRIS P1 TSL 1 (best) BASIC1.92□□□□□ -2.1
KRTAP4-11Q9BYQ6 LIN28B-201ENST00000345080 5505 ntAPPRIS P1 TSL 1 (best) BASIC1.92□□□□□ -2.1
KRTAP4-11Q9BYQ6 PRKACB-217ENST00000610457 4206 ntTSL 2 BASIC1.92□□□□□ -2.1
KRTAP4-11Q9BYQ6 PRKACB-218ENST00000610703 4240 ntTSL 2 BASIC1.92□□□□□ -2.1
KRTAP4-11Q9BYQ6 ATG13-201ENST00000359513 4348 ntTSL 1 (best) BASIC1.92□□□□□ -2.1
KRTAP4-11Q9BYQ6 RN7SKP23-201ENST00000625159 4301 ntBASIC1.92□□□□□ -2.1
KRTAP4-11Q9BYQ6 R3HDM1-203ENST00000409606 3673 ntAPPRIS ALT1 TSL 2 BASIC1.92□□□□□ -2.1
KRTAP4-11Q9BYQ6 MECOM-208ENST00000468789 3691 ntAPPRIS P3 TSL 2 BASIC1.92□□□□□ -2.1
KRTAP4-11Q9BYQ6 HOOK3-201ENST00000307602 14398 ntAPPRIS P1 TSL 1 (best) BASIC1.92□□□□□ -2.1
KRTAP4-11Q9BYQ6 VANGL1-204ENST00000369510 8647 ntAPPRIS ALT1 TSL 1 (best) BASIC1.92□□□□□ -2.1
KRTAP4-11Q9BYQ6 SUN1-203ENST00000401592 3953 ntAPPRIS ALT2 TSL 1 (best) BASIC1.92□□□□□ -2.1
KRTAP4-11Q9BYQ6 NAT10-205ENST00000531159 3436 ntAPPRIS ALT2 TSL 2 BASIC1.92□□□□□ -2.1
KRTAP4-11Q9BYQ6 KIF21A-204ENST00000544797 5040 ntTSL 1 (best) BASIC1.92□□□□□ -2.1
KRTAP4-11Q9BYQ6 FAM107B-229ENST00000622567 3510 ntAPPRIS P1 TSL 2 BASIC1.92□□□□□ -2.1
KRTAP4-11Q9BYQ6 APOL3-203ENST00000397287 3626 ntTSL 1 (best) BASIC1.92□□□□□ -2.1
KRTAP4-11Q9BYQ6 LINC01814-202ENST00000454224 8839 ntTSL 1 (best) BASIC1.92□□□□□ -2.1
KRTAP4-11Q9BYQ6 DEFA6-201ENST00000297436 469 ntAPPRIS P1 TSL 1 (best) BASIC1.92□□□□□ -2.1
KRTAP4-11Q9BYQ6 SELENOWP1-201ENST00000322792 252 ntBASIC1.92□□□□□ -2.1
KRTAP4-11Q9BYQ6 S100A13-201ENST00000339556 514 ntAPPRIS P1 TSL 2 BASIC1.92□□□□□ -2.1
KRTAP4-11Q9BYQ6 Y_RNA.74-201ENST00000362911 99 ntBASIC1.92□□□□□ -2.1
KRTAP4-11Q9BYQ6 RNA5SP242-201ENST00000364171 118 ntBASIC1.92□□□□□ -2.1
KRTAP4-11Q9BYQ6 Y_RNA.282-201ENST00000364793 102 ntBASIC1.92□□□□□ -2.1
KRTAP4-11Q9BYQ6 MIR585-201ENST00000384887 94 ntBASIC1.92□□□□□ -2.1
KRTAP4-11Q9BYQ6 MIR153-1-201ENST00000384914 90 ntBASIC1.92□□□□□ -2.1
KRTAP4-11Q9BYQ6 MIR555-201ENST00000384987 96 ntBASIC1.92□□□□□ -2.1
KRTAP4-11Q9BYQ6 MIR188-201ENST00000385034 86 ntBASIC1.92□□□□□ -2.1
KRTAP4-11Q9BYQ6 MIR152-201ENST00000385212 87 ntBASIC1.92□□□□□ -2.1
KRTAP4-11Q9BYQ6 MIR579-201ENST00000385221 98 ntBASIC1.92□□□□□ -2.1
KRTAP4-11Q9BYQ6 MIR527-201ENST00000385244 85 ntBASIC1.92□□□□□ -2.1
KRTAP4-11Q9BYQ6 RNA5SP23-201ENST00000391006 105 ntBASIC1.92□□□□□ -2.1
KRTAP4-11Q9BYQ6 AL645939.3-201ENST00000435408 225 ntBASIC1.92□□□□□ -2.1
KRTAP4-11Q9BYQ6 AC097635.1-201ENST00000450678 155 ntBASIC1.92□□□□□ -2.1
KRTAP4-11Q9BYQ6 AL031183.1-201ENST00000457667 207 ntBASIC1.92□□□□□ -2.1
KRTAP4-11Q9BYQ6 snoU13.2-201ENST00000459201 104 ntBASIC1.92□□□□□ -2.1
KRTAP4-11Q9BYQ6 RN7SL390P-201ENST00000470634 284 ntBASIC1.92□□□□□ -2.1
KRTAP4-11Q9BYQ6 RNU6-287P-201ENST00000516230 98 ntBASIC1.92□□□□□ -2.1
KRTAP4-11Q9BYQ6 RNA5SP318-201ENST00000516352 92 ntBASIC1.92□□□□□ -2.1
KRTAP4-11Q9BYQ6 IGLC4-201ENST00000517690 248 ntBASIC1.92□□□□□ -2.1
KRTAP4-11Q9BYQ6 IGLV1-62-201ENST00000518003 441 ntBASIC1.92□□□□□ -2.1
KRTAP4-11Q9BYQ6 AC007207.2-201ENST00000543206 542 ntTSL 3 BASIC1.92□□□□□ -2.1
KRTAP4-11Q9BYQ6 GNG2-203ENST00000553432 577 ntTSL 4 BASIC1.92□□□□□ -2.1
KRTAP4-11Q9BYQ6 ZNF841-203ENST00000594295 3819 ntAPPRIS P1 TSL 3 BASIC1.92□□□□□ -2.1
KRTAP4-11Q9BYQ6 AC006262.3-201ENST00000597337 258 ntTSL 3 BASIC1.92□□□□□ -2.1
Retrieved 100 of 98,524 protein–RNA pairs in 161.1 ms