Protein–RNA interactions for Protein: O60858

TRIM13, E3 ubiquitin-protein ligase TRIM13, humanhuman

Predictions only

Length 407 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM13O60858 RNU6-1154P-201ENST00000391001 104 ntBASIC3.95□□□□□ -1.78
TRIM13O60858 RNU6-817P-201ENST00000391083 104 ntBASIC3.95□□□□□ -1.78
TRIM13O60858 MS4A4E-201ENST00000398984 479 ntTSL 5 BASIC3.95□□□□□ -1.78
TRIM13O60858 U3.39-201ENST00000408569 239 ntBASIC3.95□□□□□ -1.78
TRIM13O60858 Y_RNA.602-201ENST00000410535 92 ntBASIC3.95□□□□□ -1.78
TRIM13O60858 AL354726.1-201ENST00000411981 402 ntTSL 2 BASIC3.95□□□□□ -1.78
TRIM13O60858 CYCSP33-201ENST00000414485 327 ntBASIC3.95□□□□□ -1.78
TRIM13O60858 BMS1P22-201ENST00000414726 313 ntBASIC3.95□□□□□ -1.78
TRIM13O60858 SSXP9-201ENST00000417503 292 ntBASIC3.95□□□□□ -1.78
TRIM13O60858 MS4A4E-203ENST00000425663 350 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
TRIM13O60858 COX6B1P7-201ENST00000430845 235 ntBASIC3.95□□□□□ -1.78
TRIM13O60858 AC007389.2-201ENST00000434630 306 ntBASIC3.95□□□□□ -1.78
TRIM13O60858 AL031659.1-201ENST00000447075 539 ntBASIC3.95□□□□□ -1.78
TRIM13O60858 AC087477.1-201ENST00000465747 340 ntBASIC3.95□□□□□ -1.78
TRIM13O60858 MIR1302-2HG-201ENST00000469289 535 ntTSL 5 BASIC3.95□□□□□ -1.78
TRIM13O60858 RN7SL481P-201ENST00000477764 299 ntBASIC3.95□□□□□ -1.78
TRIM13O60858 RN7SL826P-201ENST00000479724 288 ntBASIC3.95□□□□□ -1.78
TRIM13O60858 LINC02017-201ENST00000496829 474 ntTSL 3 BASIC3.95□□□□□ -1.78
TRIM13O60858 RNU6-496P-201ENST00000516145 99 ntBASIC3.95□□□□□ -1.78
TRIM13O60858 AC007458.1-201ENST00000542812 373 ntBASIC3.95□□□□□ -1.78
TRIM13O60858 LINC02386-202ENST00000551287 564 ntTSL 4 BASIC3.95□□□□□ -1.78
TRIM13O60858 AC087463.1-201ENST00000568541 556 ntTSL 2 BASIC3.95□□□□□ -1.78
TRIM13O60858 MIR15A-201ENST00000607334 83 ntBASIC3.95□□□□□ -1.78
TRIM13O60858 AC104465.1-201ENST00000611365 139 ntBASIC3.95□□□□□ -1.78
TRIM13O60858 AC034102.8-201ENST00000615146 484 ntBASIC3.95□□□□□ -1.78
TRIM13O60858 NCBP1-205ENST00000629069 249 ntTSL 5 BASIC3.95□□□□□ -1.78
TRIM13O60858 FGD4-213ENST00000546442 3503 ntTSL 5 BASIC3.95□□□□□ -1.78
TRIM13O60858 N4BP2L2-202ENST00000357505 2917 ntTSL 2 BASIC3.95□□□□□ -1.78
TRIM13O60858 CCDC102B-201ENST00000360242 2711 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
TRIM13O60858 AC016687.3-202ENST00000505018 2404 ntTSL 1 (best) BASIC3.95□□□□□ -1.78
TRIM13O60858 DENND2C-203ENST00000393277 4730 ntTSL 5 BASIC3.95□□□□□ -1.78
TRIM13O60858 OSBPL8-202ENST00000393249 7047 ntAPPRIS ALT1 TSL 1 (best) BASIC3.95□□□□□ -1.78
TRIM13O60858 ADGRG2-205ENST00000357991 4661 ntAPPRIS P3 TSL 1 (best) BASIC3.95□□□□□ -1.78
TRIM13O60858 KCNJ16-201ENST00000283936 4062 ntAPPRIS P1 TSL 1 (best) BASIC3.95□□□□□ -1.78
TRIM13O60858 RAP1GDS1-205ENST00000408927 3681 ntAPPRIS P3 TSL 2 BASIC3.94□□□□□ -1.78
TRIM13O60858 PPIP5K2-217ENST00000627916 6010 ntAPPRIS ALT2 TSL 5 BASIC3.94□□□□□ -1.78
TRIM13O60858 UBE2D3-233ENST00000618836 3472 ntAPPRIS ALT1 TSL 5 BASIC3.94□□□□□ -1.78
TRIM13O60858 GCSAML-203ENST00000366491 4130 ntAPPRIS ALT2 TSL 2 BASIC3.94□□□□□ -1.78
TRIM13O60858 ARHGAP28-202ENST00000314319 5415 ntAPPRIS P2 TSL 5 BASIC3.94□□□□□ -1.78
TRIM13O60858 TNP2-201ENST00000312693 626 ntAPPRIS P1 TSL 1 (best) BASIC3.94□□□□□ -1.78
TRIM13O60858 Y_RNA.44-201ENST00000362676 108 ntBASIC3.94□□□□□ -1.78
TRIM13O60858 RNU6-288P-201ENST00000363690 104 ntBASIC3.94□□□□□ -1.78
TRIM13O60858 RN7SKP103-201ENST00000363848 320 ntBASIC3.94□□□□□ -1.78
TRIM13O60858 Y_RNA.233-201ENST00000364407 101 ntBASIC3.94□□□□□ -1.78
TRIM13O60858 RNY3P4-201ENST00000384428 101 ntBASIC3.94□□□□□ -1.78
TRIM13O60858 MIR124-3-201ENST00000384866 87 ntBASIC3.94□□□□□ -1.78
TRIM13O60858 RNU6-882P-201ENST00000391025 103 ntBASIC3.94□□□□□ -1.78
TRIM13O60858 SNORA53-201ENST00000391141 249 ntBASIC3.94□□□□□ -1.78
TRIM13O60858 HMGN2P8-201ENST00000391458 268 ntBASIC3.94□□□□□ -1.78
TRIM13O60858 RPL21P75-201ENST00000396599 483 ntBASIC3.94□□□□□ -1.78
TRIM13O60858 RPL21P28-201ENST00000401418 483 ntBASIC3.94□□□□□ -1.78
TRIM13O60858 HSPE1P8-201ENST00000406997 288 ntBASIC3.94□□□□□ -1.78
TRIM13O60858 AL590139.1-201ENST00000416267 400 ntBASIC3.94□□□□□ -1.78
TRIM13O60858 AC119751.6-201ENST00000416712 186 ntBASIC3.94□□□□□ -1.78
TRIM13O60858 LINC02331-201ENST00000418927 602 ntTSL 5 BASIC3.94□□□□□ -1.78
TRIM13O60858 AC093151.3-203ENST00000422305 514 ntTSL 3 BASIC3.94□□□□□ -1.78
TRIM13O60858 AL590556.1-201ENST00000423231 483 ntBASIC3.94□□□□□ -1.78
TRIM13O60858 PPP1R11P2-201ENST00000423543 382 ntBASIC3.94□□□□□ -1.78
TRIM13O60858 RNU6-953P-201ENST00000459154 107 ntBASIC3.94□□□□□ -1.78
TRIM13O60858 RPL21P11-201ENST00000461458 483 ntBASIC3.94□□□□□ -1.78
TRIM13O60858 RPL21P39-201ENST00000463605 483 ntBASIC3.94□□□□□ -1.78
TRIM13O60858 AC132942.1-201ENST00000486753 483 ntBASIC3.94□□□□□ -1.78
TRIM13O60858 UBE2Q2P9-201ENST00000490086 202 ntBASIC3.94□□□□□ -1.78
TRIM13O60858 AC093591.1-201ENST00000491435 481 ntBASIC3.94□□□□□ -1.78
TRIM13O60858 RPL21P16-201ENST00000495531 483 ntBASIC3.94□□□□□ -1.78
TRIM13O60858 SNORD116-28-201ENST00000516123 91 ntBASIC3.94□□□□□ -1.78
TRIM13O60858 RNU6-390P-201ENST00000516259 103 ntBASIC3.94□□□□□ -1.78
TRIM13O60858 SNORA31.18-201ENST00000517043 134 ntBASIC3.94□□□□□ -1.78
TRIM13O60858 AC109479.2-201ENST00000517842 174 ntBASIC3.94□□□□□ -1.78
TRIM13O60858 MRPS18CP4-201ENST00000535821 231 ntBASIC3.94□□□□□ -1.78
TRIM13O60858 G2E3-AS1-202ENST00000550118 609 ntTSL 5 BASIC3.94□□□□□ -1.78
TRIM13O60858 AL355095.1-201ENST00000554451 539 ntTSL 2 BASIC3.94□□□□□ -1.78
TRIM13O60858 AC022706.1-202ENST00000585387 540 ntTSL 3 BASIC3.94□□□□□ -1.78
TRIM13O60858 AC006077.1-201ENST00000604746 343 ntBASIC3.94□□□□□ -1.78
TRIM13O60858 Y_RNA.772-201ENST00000606692 102 ntBASIC3.94□□□□□ -1.78
TRIM13O60858 uc_338.32-201ENST00000615087 172 ntBASIC3.94□□□□□ -1.78
TRIM13O60858 MIR7151-201ENST00000617477 60 ntBASIC3.94□□□□□ -1.78
TRIM13O60858 MIR7703-201ENST00000620784 77 ntBASIC3.94□□□□□ -1.78
TRIM13O60858 PTPN22-202ENST00000420377 2726 ntAPPRIS ALT2 TSL 1 (best) BASIC3.94□□□□□ -1.78
TRIM13O60858 D21S2088E-201ENST00000262354 1725 ntTSL 1 (best) BASIC3.94□□□□□ -1.78
TRIM13O60858 SYNE2-202ENST00000344113 21777 ntAPPRIS ALT2 TSL 1 (best) BASIC3.94□□□□□ -1.78
TRIM13O60858 GYPA-202ENST00000360771 2659 ntAPPRIS P3 TSL 1 (best) BASIC3.94□□□□□ -1.78
TRIM13O60858 LRIF1-203ENST00000494675 1912 ntAPPRIS ALT2 TSL 2 BASIC3.93□□□□□ -1.78
TRIM13O60858 OR6A2-202ENST00000641196 4295 ntAPPRIS P1 BASIC3.93□□□□□ -1.78
TRIM13O60858 RTN4-209ENST00000405240 4061 ntTSL 1 (best) BASIC3.93□□□□□ -1.78
TRIM13O60858 EMSY-210ENST00000529032 6848 ntAPPRIS P3 TSL 1 (best) BASIC3.93□□□□□ -1.78
TRIM13O60858 Y_RNA.292-201ENST00000364904 97 ntBASIC3.93□□□□□ -1.78
TRIM13O60858 SNORA22C-201ENST00000384614 134 ntBASIC3.93□□□□□ -1.78
TRIM13O60858 AL079342.1-201ENST00000401460 267 ntBASIC3.93□□□□□ -1.78
TRIM13O60858 RPL7AP73-201ENST00000413490 353 ntBASIC3.93□□□□□ -1.78
TRIM13O60858 NCKAP5-IT1-201ENST00000416437 554 ntTSL 4 BASIC3.93□□□□□ -1.78
TRIM13O60858 INTS6-AS1-201ENST00000434512 466 ntTSL 3 BASIC3.93□□□□□ -1.78
TRIM13O60858 KCNJ6-AS1-201ENST00000435001 357 ntTSL 5 BASIC3.93□□□□□ -1.78
TRIM13O60858 HMGB1P37-201ENST00000439613 609 ntBASIC3.93□□□□□ -1.78
TRIM13O60858 ATP2B2-IT1-201ENST00000440152 472 ntTSL 3 BASIC3.93□□□□□ -1.78
TRIM13O60858 RN7SL93P-201ENST00000463035 293 ntBASIC3.93□□□□□ -1.78
TRIM13O60858 AC092059.1-201ENST00000485347 429 ntTSL 3 BASIC3.93□□□□□ -1.78
TRIM13O60858 SNORA31.3-201ENST00000516029 96 ntBASIC3.93□□□□□ -1.78
TRIM13O60858 AC069133.1-201ENST00000522857 566 ntTSL 4 BASIC3.93□□□□□ -1.78
TRIM13O60858 OOSP2-203ENST00000532905 496 ntAPPRIS ALT2 TSL 3 BASIC3.93□□□□□ -1.78
Retrieved 100 of 98,524 protein–RNA pairs in 110.1 ms