RNA–Protein interactions for RNA: ENST00000516145.1

RNU6-496P-201, Transcript of RNA, U6 small nuclear 496, pseudogene, humanhuman

BASIC

Gene RNU6-496P, Length 99 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-496P-201ENST00000516145 AEBP2Q6ZN18 517 aaPredicted RBP16.18■□□□□ 0.18
RNU6-496P-201ENST00000516145 CHIC1Q5VXU3 224 aa15.36■□□□□ 0.05
RNU6-496P-201ENST00000516145 SENP3Q9H4L4 574 aaPredicted RBP13.81□□□□□ -0.2
RNU6-496P-201ENST00000516145 PHF23Q9BUL5 403 aaPredicted RBP13.63□□□□□ -0.23
RNU6-496P-201ENST00000516145 FOXD1Q16676 465 aa12.87□□□□□ -0.35
RNU6-496P-201ENST00000516145 PLPPR3Q6T4P5 718 aa12.29□□□□□ -0.44
RNU6-496P-201ENST00000516145 PIAS4Q8N2W9 510 aaPredicted RBP12.06□□□□□ -0.48
RNU6-496P-201ENST00000516145 MSH5O43196 834 aa12.04□□□□□ -0.48
RNU6-496P-201ENST00000516145 PPP6R1Q9UPN7 881 aa12.04□□□□□ -0.48
RNU6-496P-201ENST00000516145 ADRA2BP18089 450 aa12.03□□□□□ -0.48
RNU6-496P-201ENST00000516145 POTEDQ86YR6 584 aa11.75□□□□□ -0.53
RNU6-496P-201ENST00000516145 MAPK8IP2Q13387 824 aaPredicted RBP11.04□□□□□ -0.64
RNU6-496P-201ENST00000516145 SCAF1Q9H7N4 1312 aaKnown RBP10.99□□□□□ -0.65
RNU6-496P-201ENST00000516145 DMRT2Q9Y5R5 561 aa10.94□□□□□ -0.66
RNU6-496P-201ENST00000516145 PPP4R3CPQ6ZMV5 832 aa10.78□□□□□ -0.68
RNU6-496P-201ENST00000516145 DCAF8L1A6NGE4 600 aa10.57□□□□□ -0.72
RNU6-496P-201ENST00000516145 CNKSR2Q8WXI2 1034 aa10.57□□□□□ -0.72
RNU6-496P-201ENST00000516145 HOXD11P31277 338 aaPredicted RBP10.52□□□□□ -0.73
RNU6-496P-201ENST00000516145 RNF216Q9NWF9 866 aaPredicted RBP10.45□□□□□ -0.74
RNU6-496P-201ENST00000516145 NCBP3Q53F19 620 aaKnown RBP10.37□□□□□ -0.75
RNU6-496P-201ENST00000516145 CACNB1Q02641 598 aaPredicted RBP10.36□□□□□ -0.75
RNU6-496P-201ENST00000516145 RNF39Q9H2S5 420 aa10.27□□□□□ -0.77
RNU6-496P-201ENST00000516145 NPM3O75607 178 aaKnown RBP10.22□□□□□ -0.77
RNU6-496P-201ENST00000516145 DNAJC5BQ9UF47 199 aa10.12□□□□□ -0.79
RNU6-496P-201ENST00000516145 C1QBPQ07021 282 aaKnown RBP10.11□□□□□ -0.79
RNU6-496P-201ENST00000516145 GRWD1Q9BQ67 446 aaKnown RBP eCLIP10.09□□□□□ -0.79
RNU6-496P-201ENST00000516145 KCNA4P22459 653 aa10.04□□□□□ -0.8
RNU6-496P-201ENST00000516145 U3KPZ7 1027 aaPredicted RBP9.84□□□□□ -0.83
RNU6-496P-201ENST00000516145 SLC4A2P04920 1241 aa9.74□□□□□ -0.85
RNU6-496P-201ENST00000516145 CAPN15O75808 1086 aa9.72□□□□□ -0.85
RNU6-496P-201ENST00000516145 SPINK5Q9NQ38 1064 aaPredicted RBP9.72□□□□□ -0.85
RNU6-496P-201ENST00000516145 DSG3P32926 999 aa9.62□□□□□ -0.87
RNU6-496P-201ENST00000516145 TRHP20396 242 aaPredicted RBP9.58□□□□□ -0.88
RNU6-496P-201ENST00000516145 APLP2Q06481 763 aa9.58□□□□□ -0.88
RNU6-496P-201ENST00000516145 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP9.56□□□□□ -0.88
RNU6-496P-201ENST00000516145 HNRNPUL2Q1KMD3 747 aaKnown RBP9.56□□□□□ -0.88
RNU6-496P-201ENST00000516145 SAMD1Q6SPF0 538 aaPredicted RBP9.52□□□□□ -0.89
RNU6-496P-201ENST00000516145 ABCB7O75027 752 aa9.51□□□□□ -0.89
RNU6-496P-201ENST00000516145 ZNF219Q9P2Y4 722 aaPredicted RBP9.51□□□□□ -0.89
RNU6-496P-201ENST00000516145 SLC4A1APQ9BWU0 796 aaKnown RBP9.49□□□□□ -0.89
RNU6-496P-201ENST00000516145 MYCNP04198 464 aaPredicted RBP9.45□□□□□ -0.9
RNU6-496P-201ENST00000516145 FOXD4L1Q9NU39 408 aa9.35□□□□□ -0.91
RNU6-496P-201ENST00000516145 POLA2Q14181 598 aa9.3□□□□□ -0.92
RNU6-496P-201ENST00000516145 ATF5Q9Y2D1 282 aaPredicted RBP9.25□□□□□ -0.93
RNU6-496P-201ENST00000516145 ZBTB22O15209 634 aa9.23□□□□□ -0.93
RNU6-496P-201ENST00000516145 POTEHQ6S545 545 aa9.21□□□□□ -0.94
RNU6-496P-201ENST00000516145 RBM42Q9BTD8 480 aaKnown RBP9.19□□□□□ -0.94
RNU6-496P-201ENST00000516145 ZBTB12Q9Y330 459 aaPredicted RBP9.09□□□□□ -0.95
RNU6-496P-201ENST00000516145 ATXN8OSP0DMR3 200 aa9.05□□□□□ -0.96
RNU6-496P-201ENST00000516145 OSCARQ8IYS5 282 aa9□□□□□ -0.97
RNU6-496P-201ENST00000516145 CHRDL2Q6WN34 429 aa8.99□□□□□ -0.97
RNU6-496P-201ENST00000516145 AKT1S1Q96B36 256 aa8.97□□□□□ -0.97
RNU6-496P-201ENST00000516145 REM2Q8IYK8 340 aaPredicted RBP8.9□□□□□ -0.98
RNU6-496P-201ENST00000516145 FBLN2P98095 1184 aa8.89□□□□□ -0.99
RNU6-496P-201ENST00000516145 PITPNM1O00562 1244 aa8.81□□□□□ -1
RNU6-496P-201ENST00000516145 SPDYE2BA6NHP3 402 aa8.8□□□□□ -1
RNU6-496P-201ENST00000516145 SPDYE6P0CI01 402 aa8.8□□□□□ -1
RNU6-496P-201ENST00000516145 MKRN4PQ13434 485 aaPredicted RBP8.8□□□□□ -1
RNU6-496P-201ENST00000516145 SPDYE2Q495Y8 402 aa8.8□□□□□ -1
RNU6-496P-201ENST00000516145 CSRNP3Q8WYN3 585 aa8.79□□□□□ -1
RNU6-496P-201ENST00000516145 PIP4P2Q8N4L2 257 aa8.78□□□□□ -1
RNU6-496P-201ENST00000516145 EHMT2Q96KQ7 1210 aa8.74□□□□□ -1.01
RNU6-496P-201ENST00000516145 ZNF692Q9BU19 519 aaPredicted RBP8.73□□□□□ -1.01
RNU6-496P-201ENST00000516145 FXR2P51116 673 aaKnown RBP eCLIP8.7□□□□□ -1.02
RNU6-496P-201ENST00000516145 CLEC11AQ9Y240 323 aa8.68□□□□□ -1.02
RNU6-496P-201ENST00000516145 SSUH2Q9Y2M2 353 aa8.68□□□□□ -1.02
RNU6-496P-201ENST00000516145 SPDYE1Q8NFV5 336 aaPredicted RBP8.67□□□□□ -1.02
RNU6-496P-201ENST00000516145 HAX1O00165 279 aa8.65□□□□□ -1.02
RNU6-496P-201ENST00000516145 SP7Q8TDD2 431 aaPredicted RBP8.64□□□□□ -1.03
RNU6-496P-201ENST00000516145 PABPN1Q86U42 306 aaKnown RBP eCLIP8.6□□□□□ -1.03
RNU6-496P-201ENST00000516145 PRKAR2AP13861 404 aaKnown RBP8.59□□□□□ -1.03
RNU6-496P-201ENST00000516145 PRR29P0C7W0 189 aa8.52□□□□□ -1.05
RNU6-496P-201ENST00000516145 EVX2Q03828 476 aa8.51□□□□□ -1.05
RNU6-496P-201ENST00000516145 CHADLQ6NUI6 762 aa8.51□□□□□ -1.05
RNU6-496P-201ENST00000516145 C19orf67A6NJJ6 358 aa8.43□□□□□ -1.06
RNU6-496P-201ENST00000516145 SPDYE4A6NLX3 237 aa8.41□□□□□ -1.06
RNU6-496P-201ENST00000516145 FARP1Q9Y4F1 1045 aaPredicted RBP8.36□□□□□ -1.07
RNU6-496P-201ENST00000516145 STAG3Q9UJ98 1225 aa8.34□□□□□ -1.07
RNU6-496P-201ENST00000516145 GABBR2O75899 941 aa8.32□□□□□ -1.08
RNU6-496P-201ENST00000516145 CD44P16070 742 aaKnown RBP8.32□□□□□ -1.08
RNU6-496P-201ENST00000516145 CREBZFQ9NS37 354 aa8.29□□□□□ -1.08
RNU6-496P-201ENST00000516145 ZRANB1Q9UGI0 708 aa8.21□□□□□ -1.1
RNU6-496P-201ENST00000516145 NPM1P06748 294 aaKnown RBP eCLIP8.16□□□□□ -1.1
RNU6-496P-201ENST00000516145 CLCN6P51797 869 aa8.16□□□□□ -1.1
RNU6-496P-201ENST00000516145 ZNF579Q8NAF0 562 aaKnown RBP8.16□□□□□ -1.1
RNU6-496P-201ENST00000516145 PAK3O75914 559 aaPredicted RBP8.15□□□□□ -1.1
RNU6-496P-201ENST00000516145 PROM2Q8N271 834 aa8.15□□□□□ -1.1
RNU6-496P-201ENST00000516145 POTEIP0CG38 1075 aa8.13□□□□□ -1.11
RNU6-496P-201ENST00000516145 MNX1P50219 401 aaPredicted RBP8.13□□□□□ -1.11
RNU6-496P-201ENST00000516145 DCBLD2Q96PD2 775 aa8.12□□□□□ -1.11
RNU6-496P-201ENST00000516145 LHX8Q68G74 356 aa8.11□□□□□ -1.11
RNU6-496P-201ENST00000516145 PHF12Q96QT6 1004 aa8.1□□□□□ -1.11
RNU6-496P-201ENST00000516145 GALR2O43603 387 aaPredicted RBP8.09□□□□□ -1.11
RNU6-496P-201ENST00000516145 MIER1Q8N108 512 aa8.05□□□□□ -1.12
RNU6-496P-201ENST00000516145 PLEKHG5O94827 1062 aa8.03□□□□□ -1.12
RNU6-496P-201ENST00000516145 TSPYL2Q9H2G4 693 aaPredicted RBP8.03□□□□□ -1.12
RNU6-496P-201ENST00000516145 FKBP8Q14318 412 aa8.01□□□□□ -1.13
RNU6-496P-201ENST00000516145 PLCD3Q8N3E9 789 aa7.99□□□□□ -1.13
RNU6-496P-201ENST00000516145 MS4A3Q96HJ5 214 aa7.98□□□□□ -1.13
RNU6-496P-201ENST00000516145 RASEFQ8IZ41 740 aa7.94□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 11 ms