RNA–Protein interactions for RNA: ENST00000262354.4

D21S2088E-201, humanhuman

TSL 1 (best) BASIC

Gene D21S2088E, Length 1,725 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
D21S2088E-201ENST00000262354 AEBP2Q6ZN18 517 aaPredicted RBP17.01■□□□□ 0.31
D21S2088E-201ENST00000262354 CHIC1Q5VXU3 224 aa15.98■□□□□ 0.15
D21S2088E-201ENST00000262354 POTEDQ86YR6 584 aa15□□□□□ -0.01
D21S2088E-201ENST00000262354 SENP3Q9H4L4 574 aaPredicted RBP14.75□□□□□ -0.05
D21S2088E-201ENST00000262354 PHF23Q9BUL5 403 aaPredicted RBP14.4□□□□□ -0.1
D21S2088E-201ENST00000262354 FOXD1Q16676 465 aa13.82□□□□□ -0.2
D21S2088E-201ENST00000262354 MSH5O43196 834 aa13.38□□□□□ -0.27
D21S2088E-201ENST00000262354 PIAS4Q8N2W9 510 aaPredicted RBP12.71□□□□□ -0.38
D21S2088E-201ENST00000262354 PPP6R1Q9UPN7 881 aa12.14□□□□□ -0.47
D21S2088E-201ENST00000262354 CACNB1Q02641 598 aaPredicted RBP12.11□□□□□ -0.47
D21S2088E-201ENST00000262354 ADRA2BP18089 450 aa12.07□□□□□ -0.48
D21S2088E-201ENST00000262354 PLPPR3Q6T4P5 718 aa11.98□□□□□ -0.49
D21S2088E-201ENST00000262354 DMRT2Q9Y5R5 561 aa11.52□□□□□ -0.57
D21S2088E-201ENST00000262354 MAPK8IP2Q13387 824 aaPredicted RBP11.38□□□□□ -0.59
D21S2088E-201ENST00000262354 POTEHQ6S545 545 aa11.36□□□□□ -0.59
D21S2088E-201ENST00000262354 RNF39Q9H2S5 420 aa11.28□□□□□ -0.6
D21S2088E-201ENST00000262354 DCAF8L1A6NGE4 600 aa11.16□□□□□ -0.62
D21S2088E-201ENST00000262354 SCAF1Q9H7N4 1312 aaKnown RBP11.13□□□□□ -0.63
D21S2088E-201ENST00000262354 C1QBPQ07021 282 aaKnown RBP11.09□□□□□ -0.63
D21S2088E-201ENST00000262354 HOXD11P31277 338 aaPredicted RBP10.69□□□□□ -0.7
D21S2088E-201ENST00000262354 DNAJC5BQ9UF47 199 aa10.54□□□□□ -0.72
D21S2088E-201ENST00000262354 PPP4R3CPQ6ZMV5 832 aa10.53□□□□□ -0.72
D21S2088E-201ENST00000262354 RNF216Q9NWF9 866 aaPredicted RBP10.36□□□□□ -0.75
D21S2088E-201ENST00000262354 KCNA4P22459 653 aa10.33□□□□□ -0.76
D21S2088E-201ENST00000262354 CNKSR2Q8WXI2 1034 aa10.27□□□□□ -0.77
D21S2088E-201ENST00000262354 PLSCR2Q9NRY7 297 aa10.27□□□□□ -0.77
D21S2088E-201ENST00000262354 NCBP3Q53F19 620 aaKnown RBP10.26□□□□□ -0.77
D21S2088E-201ENST00000262354 GRWD1Q9BQ67 446 aaKnown RBP eCLIP10.25□□□□□ -0.77
D21S2088E-201ENST00000262354 DSG3P32926 999 aa10.23□□□□□ -0.77
D21S2088E-201ENST00000262354 SP7Q8TDD2 431 aaPredicted RBP10.18□□□□□ -0.78
D21S2088E-201ENST00000262354 NPM3O75607 178 aaKnown RBP10.1□□□□□ -0.79
D21S2088E-201ENST00000262354 CAPN15O75808 1086 aa10.1□□□□□ -0.79
D21S2088E-201ENST00000262354 SPINK5Q9NQ38 1064 aaPredicted RBP10.01□□□□□ -0.81
D21S2088E-201ENST00000262354 EHMT2Q96KQ7 1210 aa10□□□□□ -0.81
D21S2088E-201ENST00000262354 CHRDL2Q6WN34 429 aa9.99□□□□□ -0.81
D21S2088E-201ENST00000262354 SLC4A1APQ9BWU0 796 aaKnown RBP9.89□□□□□ -0.83
D21S2088E-201ENST00000262354 RBM42Q9BTD8 480 aaKnown RBP9.85□□□□□ -0.83
D21S2088E-201ENST00000262354 U3KPZ7 1027 aaPredicted RBP9.85□□□□□ -0.83
D21S2088E-201ENST00000262354 ABCB7O75027 752 aa9.75□□□□□ -0.85
D21S2088E-201ENST00000262354 CSRNP3Q8WYN3 585 aa9.75□□□□□ -0.85
D21S2088E-201ENST00000262354 TRHP20396 242 aaPredicted RBP9.7□□□□□ -0.86
D21S2088E-201ENST00000262354 HAX1O00165 279 aa9.68□□□□□ -0.86
D21S2088E-201ENST00000262354 ZNF219Q9P2Y4 722 aaPredicted RBP9.64□□□□□ -0.87
D21S2088E-201ENST00000262354 APLP2Q06481 763 aa9.58□□□□□ -0.88
D21S2088E-201ENST00000262354 SLC4A2P04920 1241 aa9.56□□□□□ -0.88
D21S2088E-201ENST00000262354 LHX8Q68G74 356 aa9.55□□□□□ -0.88
D21S2088E-201ENST00000262354 ZBTB22O15209 634 aa9.53□□□□□ -0.88
D21S2088E-201ENST00000262354 PIP4P2Q8N4L2 257 aa9.53□□□□□ -0.88
D21S2088E-201ENST00000262354 FOXD4L1Q9NU39 408 aa9.45□□□□□ -0.9
D21S2088E-201ENST00000262354 EVX2Q03828 476 aa9.39□□□□□ -0.91
D21S2088E-201ENST00000262354 AKT1S1Q96B36 256 aa9.39□□□□□ -0.91
D21S2088E-201ENST00000262354 MYCNP04198 464 aaPredicted RBP9.35□□□□□ -0.91
D21S2088E-201ENST00000262354 FXR2P51116 673 aaKnown RBP eCLIP9.31□□□□□ -0.92
D21S2088E-201ENST00000262354 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP9.3□□□□□ -0.92
D21S2088E-201ENST00000262354 HNRNPUL2Q1KMD3 747 aaKnown RBP9.3□□□□□ -0.92
D21S2088E-201ENST00000262354 REM2Q8IYK8 340 aaPredicted RBP9.28□□□□□ -0.92
D21S2088E-201ENST00000262354 SAMD1Q6SPF0 538 aaPredicted RBP9.25□□□□□ -0.93
D21S2088E-201ENST00000262354 GABBR2O75899 941 aa9.18□□□□□ -0.94
D21S2088E-201ENST00000262354 ATXN8OSP0DMR3 200 aa9.18□□□□□ -0.94
D21S2088E-201ENST00000262354 POLA2Q14181 598 aa9.18□□□□□ -0.94
D21S2088E-201ENST00000262354 PITPNM1O00562 1244 aa9.17□□□□□ -0.94
D21S2088E-201ENST00000262354 ATF5Q9Y2D1 282 aaPredicted RBP9.08□□□□□ -0.96
D21S2088E-201ENST00000262354 C19orf67A6NJJ6 358 aa9.05□□□□□ -0.96
D21S2088E-201ENST00000262354 POTEMA6NI47 508 aa9.04□□□□□ -0.96
D21S2088E-201ENST00000262354 PCDH10Q9P2E7 1040 aa9□□□□□ -0.97
D21S2088E-201ENST00000262354 POTEGQ6S5H5 508 aa8.98□□□□□ -0.97
D21S2088E-201ENST00000262354 PRKAR2AP13861 404 aaKnown RBP8.96□□□□□ -0.98
D21S2088E-201ENST00000262354 ZBTB12Q9Y330 459 aaPredicted RBP8.95□□□□□ -0.98
D21S2088E-201ENST00000262354 POTEIP0CG38 1075 aa8.93□□□□□ -0.98
D21S2088E-201ENST00000262354 OSCARQ8IYS5 282 aa8.91□□□□□ -0.98
D21S2088E-201ENST00000262354 OTUD5Q96G74 571 aa8.81□□□□□ -1
D21S2088E-201ENST00000262354 FKBP8Q14318 412 aa8.77□□□□□ -1
D21S2088E-201ENST00000262354 DCBLD2Q96PD2 775 aa8.77□□□□□ -1
D21S2088E-201ENST00000262354 CLCN6P51797 869 aa8.74□□□□□ -1.01
D21S2088E-201ENST00000262354 CLEC11AQ9Y240 323 aa8.73□□□□□ -1.01
D21S2088E-201ENST00000262354 MKRN4PQ13434 485 aaPredicted RBP8.7□□□□□ -1.02
D21S2088E-201ENST00000262354 FBLN2P98095 1184 aa8.68□□□□□ -1.02
D21S2088E-201ENST00000262354 SPDYE1Q8NFV5 336 aaPredicted RBP8.68□□□□□ -1.02
D21S2088E-201ENST00000262354 CHADLQ6NUI6 762 aa8.63□□□□□ -1.03
D21S2088E-201ENST00000262354 CD44P16070 742 aaKnown RBP8.62□□□□□ -1.03
D21S2088E-201ENST00000262354 POTEB2H3BUK9 544 aa8.61□□□□□ -1.03
D21S2088E-201ENST00000262354 AMER1Q5JTC6 1135 aaPredicted RBP8.61□□□□□ -1.03
D21S2088E-201ENST00000262354 RTN4Q9NQC3 1192 aaKnown RBP8.6□□□□□ -1.03
D21S2088E-201ENST00000262354 SPDYE2BA6NHP3 402 aa8.57□□□□□ -1.04
D21S2088E-201ENST00000262354 SPDYE6P0CI01 402 aa8.57□□□□□ -1.04
D21S2088E-201ENST00000262354 SPDYE2Q495Y8 402 aa8.57□□□□□ -1.04
D21S2088E-201ENST00000262354 FAM163AQ96GL9 167 aaPredicted RBP8.53□□□□□ -1.04
D21S2088E-201ENST00000262354 LCE2DQ5TA82 110 aaPredicted RBP8.49□□□□□ -1.05
D21S2088E-201ENST00000262354 SSUH2Q9Y2M2 353 aa8.49□□□□□ -1.05
D21S2088E-201ENST00000262354 SPDYE4A6NLX3 237 aa8.46□□□□□ -1.05
D21S2088E-201ENST00000262354 PRR29P0C7W0 189 aa8.45□□□□□ -1.06
D21S2088E-201ENST00000262354 ZNF692Q9BU19 519 aaPredicted RBP8.45□□□□□ -1.06
D21S2088E-201ENST00000262354 CDAN1Q8IWY9 1227 aa8.44□□□□□ -1.06
D21S2088E-201ENST00000262354 MAMSTRQ6ZN01 415 aa8.43□□□□□ -1.06
D21S2088E-201ENST00000262354 PROM2Q8N271 834 aa8.42□□□□□ -1.06
D21S2088E-201ENST00000262354 ZNF579Q8NAF0 562 aaKnown RBP8.42□□□□□ -1.06
D21S2088E-201ENST00000262354 FARP1Q9Y4F1 1045 aaPredicted RBP8.4□□□□□ -1.06
D21S2088E-201ENST00000262354 GALR2O43603 387 aaPredicted RBP8.37□□□□□ -1.07
D21S2088E-201ENST00000262354 FBXO3Q9UK99 471 aa8.37□□□□□ -1.07
D21S2088E-201ENST00000262354 ZRANB1Q9UGI0 708 aa8.36□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 69 ms