RNA–Protein interactions for RNA: ENST00000494675.5

LRIF1-203, Transcript of ligand dependent nuclear receptor interacting factor 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene LRIF1, Length 1,912 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRIF1-203ENST00000494675 AEBP2Q6ZN18 517 aaPredicted RBP18.21■□□□□ 0.51
LRIF1-203ENST00000494675 CHIC1Q5VXU3 224 aa17.04■□□□□ 0.32
LRIF1-203ENST00000494675 POTEDQ86YR6 584 aa16.28■□□□□ 0.2
LRIF1-203ENST00000494675 SENP3Q9H4L4 574 aaPredicted RBP15.79■□□□□ 0.12
LRIF1-203ENST00000494675 PHF23Q9BUL5 403 aaPredicted RBP15.36■□□□□ 0.05
LRIF1-203ENST00000494675 FOXD1Q16676 465 aa14.84□□□□□ -0.03
LRIF1-203ENST00000494675 MSH5O43196 834 aa14.44□□□□□ -0.1
LRIF1-203ENST00000494675 PIAS4Q8N2W9 510 aaPredicted RBP13.52□□□□□ -0.24
LRIF1-203ENST00000494675 CACNB1Q02641 598 aaPredicted RBP13.14□□□□□ -0.31
LRIF1-203ENST00000494675 PPP6R1Q9UPN7 881 aa12.84□□□□□ -0.35
LRIF1-203ENST00000494675 ADRA2BP18089 450 aa12.72□□□□□ -0.37
LRIF1-203ENST00000494675 PLPPR3Q6T4P5 718 aa12.57□□□□□ -0.4
LRIF1-203ENST00000494675 POTEHQ6S545 545 aa12.49□□□□□ -0.41
LRIF1-203ENST00000494675 DMRT2Q9Y5R5 561 aa12.32□□□□□ -0.44
LRIF1-203ENST00000494675 RNF39Q9H2S5 420 aa12.18□□□□□ -0.46
LRIF1-203ENST00000494675 MAPK8IP2Q13387 824 aaPredicted RBP12.07□□□□□ -0.48
LRIF1-203ENST00000494675 C1QBPQ07021 282 aaKnown RBP11.94□□□□□ -0.5
LRIF1-203ENST00000494675 DCAF8L1A6NGE4 600 aa11.79□□□□□ -0.52
LRIF1-203ENST00000494675 SCAF1Q9H7N4 1312 aaKnown RBP11.71□□□□□ -0.54
LRIF1-203ENST00000494675 PLSCR2Q9NRY7 297 aa11.56□□□□□ -0.56
LRIF1-203ENST00000494675 HOXD11P31277 338 aaPredicted RBP11.37□□□□□ -0.59
LRIF1-203ENST00000494675 DNAJC5BQ9UF47 199 aa11.29□□□□□ -0.6
LRIF1-203ENST00000494675 SP7Q8TDD2 431 aaPredicted RBP11.11□□□□□ -0.63
LRIF1-203ENST00000494675 PPP4R3CPQ6ZMV5 832 aa10.96□□□□□ -0.65
LRIF1-203ENST00000494675 DSG3P32926 999 aa10.95□□□□□ -0.66
LRIF1-203ENST00000494675 RNF216Q9NWF9 866 aaPredicted RBP10.92□□□□□ -0.66
LRIF1-203ENST00000494675 CNKSR2Q8WXI2 1034 aa10.86□□□□□ -0.67
LRIF1-203ENST00000494675 GRWD1Q9BQ67 446 aaKnown RBP eCLIP10.78□□□□□ -0.683e-9■□□□□ 9.1
LRIF1-203ENST00000494675 CHRDL2Q6WN34 429 aa10.77□□□□□ -0.69
LRIF1-203ENST00000494675 CAPN15O75808 1086 aa10.67□□□□□ -0.7
LRIF1-203ENST00000494675 SPINK5Q9NQ38 1064 aaPredicted RBP10.62□□□□□ -0.71
LRIF1-203ENST00000494675 RBM42Q9BTD8 480 aaKnown RBP10.52□□□□□ -0.73
LRIF1-203ENST00000494675 NCBP3Q53F19 620 aaKnown RBP10.46□□□□□ -0.74
LRIF1-203ENST00000494675 U3KPZ7 1027 aaPredicted RBP10.42□□□□□ -0.74
LRIF1-203ENST00000494675 LHX8Q68G74 356 aa10.39□□□□□ -0.75
LRIF1-203ENST00000494675 HAX1O00165 279 aa10.37□□□□□ -0.75
LRIF1-203ENST00000494675 ABCB7O75027 752 aa10.29□□□□□ -0.76
LRIF1-203ENST00000494675 NPM3O75607 178 aaKnown RBP10.25□□□□□ -0.77
LRIF1-203ENST00000494675 PIP4P2Q8N4L2 257 aa10.23□□□□□ -0.77
LRIF1-203ENST00000494675 TRHP20396 242 aaPredicted RBP10.17□□□□□ -0.78
LRIF1-203ENST00000494675 ZNF219Q9P2Y4 722 aaPredicted RBP10.17□□□□□ -0.78
LRIF1-203ENST00000494675 EVX2Q03828 476 aa10.14□□□□□ -0.79
LRIF1-203ENST00000494675 APLP2Q06481 763 aa10.05□□□□□ -0.8
LRIF1-203ENST00000494675 AKT1S1Q96B36 256 aa9.99□□□□□ -0.81
LRIF1-203ENST00000494675 FXR2P51116 673 aaKnown RBP eCLIP9.98□□□□□ -0.812e-6■■■□□ 15.9
LRIF1-203ENST00000494675 KCNA4P22459 653 aa9.92□□□□□ -0.82
LRIF1-203ENST00000494675 SLC4A2P04920 1241 aa9.88□□□□□ -0.83
LRIF1-203ENST00000494675 GABBR2O75899 941 aa9.88□□□□□ -0.83
LRIF1-203ENST00000494675 REM2Q8IYK8 340 aaPredicted RBP9.88□□□□□ -0.83
LRIF1-203ENST00000494675 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP9.85□□□□□ -0.83
LRIF1-203ENST00000494675 HNRNPUL2Q1KMD3 747 aaKnown RBP9.85□□□□□ -0.83
LRIF1-203ENST00000494675 POTEMA6NI47 508 aa9.84□□□□□ -0.83
LRIF1-203ENST00000494675 PCDH10Q9P2E7 1040 aa9.83□□□□□ -0.84
LRIF1-203ENST00000494675 PITPNM1O00562 1244 aa9.78□□□□□ -0.84
LRIF1-203ENST00000494675 POTEGQ6S5H5 508 aa9.76□□□□□ -0.85
LRIF1-203ENST00000494675 SAMD1Q6SPF0 538 aaPredicted RBP9.76□□□□□ -0.85
LRIF1-203ENST00000494675 C19orf67A6NJJ6 358 aa9.72□□□□□ -0.85
LRIF1-203ENST00000494675 POTEIP0CG38 1075 aa9.65□□□□□ -0.86
LRIF1-203ENST00000494675 POLA2Q14181 598 aa9.61□□□□□ -0.87
LRIF1-203ENST00000494675 OTUD5Q96G74 571 aa9.53□□□□□ -0.88
LRIF1-203ENST00000494675 MYCNP04198 464 aaPredicted RBP9.52□□□□□ -0.89
LRIF1-203ENST00000494675 PRKAR2AP13861 404 aaKnown RBP9.5□□□□□ -0.89
LRIF1-203ENST00000494675 SLC4A1APQ9BWU0 796 aaKnown RBP9.44□□□□□ -0.9
LRIF1-203ENST00000494675 ZBTB12Q9Y330 459 aaPredicted RBP9.41□□□□□ -0.9
LRIF1-203ENST00000494675 OSCARQ8IYS5 282 aa9.36□□□□□ -0.91
LRIF1-203ENST00000494675 CLCN6P51797 869 aa9.35□□□□□ -0.91
LRIF1-203ENST00000494675 DCBLD2Q96PD2 775 aa9.32□□□□□ -0.92
LRIF1-203ENST00000494675 FOXD4L1Q9NU39 408 aa9.31□□□□□ -0.92
LRIF1-203ENST00000494675 ATF5Q9Y2D1 282 aaPredicted RBP9.29□□□□□ -0.92
LRIF1-203ENST00000494675 POTEB2H3BUK9 544 aa9.27□□□□□ -0.93
LRIF1-203ENST00000494675 LCE2DQ5TA82 110 aaPredicted RBP9.25□□□□□ -0.93
LRIF1-203ENST00000494675 SPDYE1Q8NFV5 336 aaPredicted RBP9.13□□□□□ -0.95
LRIF1-203ENST00000494675 CD44P16070 742 aaKnown RBP9.13□□□□□ -0.95
LRIF1-203ENST00000494675 FAM163AQ96GL9 167 aaPredicted RBP9.12□□□□□ -0.95
LRIF1-203ENST00000494675 CLEC11AQ9Y240 323 aa9.11□□□□□ -0.95
LRIF1-203ENST00000494675 CDAN1Q8IWY9 1227 aa9.11□□□□□ -0.95
LRIF1-203ENST00000494675 CHADLQ6NUI6 762 aa9.08□□□□□ -0.96
LRIF1-203ENST00000494675 SPDYE2BA6NHP3 402 aa9.07□□□□□ -0.96
LRIF1-203ENST00000494675 SPDYE6P0CI01 402 aa9.07□□□□□ -0.96
LRIF1-203ENST00000494675 SPDYE2Q495Y8 402 aa9.07□□□□□ -0.96
LRIF1-203ENST00000494675 ZBTB22O15209 634 aa9.06□□□□□ -0.96
LRIF1-203ENST00000494675 ATXN8OSP0DMR3 200 aa9.05□□□□□ -0.96
LRIF1-203ENST00000494675 MMRN1Q13201 1228 aa9.05□□□□□ -0.96
LRIF1-203ENST00000494675 FBLN2P98095 1184 aa9.01□□□□□ -0.97
LRIF1-203ENST00000494675 MAMSTRQ6ZN01 415 aa9.01□□□□□ -0.97
LRIF1-203ENST00000494675 ZNF579Q8NAF0 562 aaKnown RBP8.97□□□□□ -0.97
LRIF1-203ENST00000494675 POTEJP0CG39 1038 aa8.94□□□□□ -0.98
LRIF1-203ENST00000494675 SPNS2Q8IVW8 549 aa8.93□□□□□ -0.98
LRIF1-203ENST00000494675 ZNF692Q9BU19 519 aaPredicted RBP8.91□□□□□ -0.98
LRIF1-203ENST00000494675 GALR2O43603 387 aaPredicted RBP8.89□□□□□ -0.99
LRIF1-203ENST00000494675 SSUH2Q9Y2M2 353 aa8.88□□□□□ -0.99
LRIF1-203ENST00000494675 FARP1Q9Y4F1 1045 aaPredicted RBP8.86□□□□□ -0.99
LRIF1-203ENST00000494675 PELP1Q8IZL8 1130 aaKnown RBP8.85□□□□□ -0.99
LRIF1-203ENST00000494675 MKRN4PQ13434 485 aaPredicted RBP8.84□□□□□ -0.99
LRIF1-203ENST00000494675 SCUBE2Q9NQ36 999 aa8.84□□□□□ -0.99
LRIF1-203ENST00000494675 EHMT2Q96KQ7 1210 aa8.82□□□□□ -1
LRIF1-203ENST00000494675 PRR29P0C7W0 189 aa8.82□□□□□ -1
LRIF1-203ENST00000494675 METRNQ9UJH8 293 aa8.81□□□□□ -1
LRIF1-203ENST00000494675 CSRNP3Q8WYN3 585 aa8.8□□□□□ -1
LRIF1-203ENST00000494675 ZRANB1Q9UGI0 708 aa8.79□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms