RNA–Protein interactions for RNA: ENST00000459154.1

RNU6-953P-201, Transcript of RNA, U6 small nuclear 953, pseudogene, humanhuman

BASIC

Gene RNU6-953P, Length 107 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-953P-201ENST00000459154 AEBP2Q6ZN18 517 aaPredicted RBP14.39□□□□□ -0.11
RNU6-953P-201ENST00000459154 CHIC1Q5VXU3 224 aa14.27□□□□□ -0.13
RNU6-953P-201ENST00000459154 PHF23Q9BUL5 403 aaPredicted RBP12.65□□□□□ -0.38
RNU6-953P-201ENST00000459154 SENP3Q9H4L4 574 aaPredicted RBP12.05□□□□□ -0.48
RNU6-953P-201ENST00000459154 PLPPR3Q6T4P5 718 aa11.66□□□□□ -0.54
RNU6-953P-201ENST00000459154 FOXD1Q16676 465 aa11.22□□□□□ -0.61
RNU6-953P-201ENST00000459154 PPP6R1Q9UPN7 881 aa11.06□□□□□ -0.64
RNU6-953P-201ENST00000459154 ADRA2BP18089 450 aa11.02□□□□□ -0.65
RNU6-953P-201ENST00000459154 PIAS4Q8N2W9 510 aaPredicted RBP10.57□□□□□ -0.72
RNU6-953P-201ENST00000459154 KCNA4P22459 653 aa10.46□□□□□ -0.73
RNU6-953P-201ENST00000459154 PPP4R3CPQ6ZMV5 832 aa10.34□□□□□ -0.75
RNU6-953P-201ENST00000459154 MSH5O43196 834 aa10.14□□□□□ -0.79
RNU6-953P-201ENST00000459154 NCBP3Q53F19 620 aaKnown RBP10.07□□□□□ -0.8
RNU6-953P-201ENST00000459154 NPM3O75607 178 aaKnown RBP10.03□□□□□ -0.8
RNU6-953P-201ENST00000459154 EHMT2Q96KQ7 1210 aa9.98□□□□□ -0.81
RNU6-953P-201ENST00000459154 CNKSR2Q8WXI2 1034 aa9.96□□□□□ -0.82
RNU6-953P-201ENST00000459154 SCAF1Q9H7N4 1312 aaKnown RBP9.96□□□□□ -0.82
RNU6-953P-201ENST00000459154 SLC4A1APQ9BWU0 796 aaKnown RBP9.95□□□□□ -0.82
RNU6-953P-201ENST00000459154 MAPK8IP2Q13387 824 aaPredicted RBP9.94□□□□□ -0.82
RNU6-953P-201ENST00000459154 CSRNP3Q8WYN3 585 aa9.82□□□□□ -0.84
RNU6-953P-201ENST00000459154 DNAJC5BQ9UF47 199 aa9.74□□□□□ -0.85
RNU6-953P-201ENST00000459154 RNF216Q9NWF9 866 aaPredicted RBP9.71□□□□□ -0.86
RNU6-953P-201ENST00000459154 DMRT2Q9Y5R5 561 aa9.71□□□□□ -0.86
RNU6-953P-201ENST00000459154 ZBTB22O15209 634 aa9.69□□□□□ -0.86
RNU6-953P-201ENST00000459154 HOXD11P31277 338 aaPredicted RBP9.64□□□□□ -0.87
RNU6-953P-201ENST00000459154 FOXD4L1Q9NU39 408 aa9.49□□□□□ -0.89
RNU6-953P-201ENST00000459154 SLC4A2P04920 1241 aa9.45□□□□□ -0.9
RNU6-953P-201ENST00000459154 MYCNP04198 464 aaPredicted RBP9.2□□□□□ -0.94
RNU6-953P-201ENST00000459154 DCAF8L1A6NGE4 600 aa9.15□□□□□ -0.94
RNU6-953P-201ENST00000459154 ATXN8OSP0DMR3 200 aa9.13□□□□□ -0.95
RNU6-953P-201ENST00000459154 GRWD1Q9BQ67 446 aaKnown RBP eCLIP9.08□□□□□ -0.96
RNU6-953P-201ENST00000459154 U3KPZ7 1027 aaPredicted RBP9.06□□□□□ -0.96
RNU6-953P-201ENST00000459154 ATF5Q9Y2D1 282 aaPredicted RBP9.03□□□□□ -0.96
RNU6-953P-201ENST00000459154 SAMD1Q6SPF0 538 aaPredicted RBP8.94□□□□□ -0.98
RNU6-953P-201ENST00000459154 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP8.92□□□□□ -0.98
RNU6-953P-201ENST00000459154 HNRNPUL2Q1KMD3 747 aaKnown RBP8.92□□□□□ -0.98
RNU6-953P-201ENST00000459154 POTEDQ86YR6 584 aa8.8□□□□□ -1
RNU6-953P-201ENST00000459154 FKBP8Q14318 412 aa8.79□□□□□ -1
RNU6-953P-201ENST00000459154 RNF39Q9H2S5 420 aa8.78□□□□□ -1
RNU6-953P-201ENST00000459154 ZNF219Q9P2Y4 722 aaPredicted RBP8.78□□□□□ -1
RNU6-953P-201ENST00000459154 APLP2Q06481 763 aa8.73□□□□□ -1.01
RNU6-953P-201ENST00000459154 SPINK5Q9NQ38 1064 aaPredicted RBP8.72□□□□□ -1.01
RNU6-953P-201ENST00000459154 MKRN4PQ13434 485 aaPredicted RBP8.66□□□□□ -1.02
RNU6-953P-201ENST00000459154 C1QBPQ07021 282 aaKnown RBP8.65□□□□□ -1.02
RNU6-953P-201ENST00000459154 TRHP20396 242 aaPredicted RBP8.62□□□□□ -1.03
RNU6-953P-201ENST00000459154 CAPN15O75808 1086 aa8.58□□□□□ -1.04
RNU6-953P-201ENST00000459154 POLA2Q14181 598 aa8.58□□□□□ -1.04
RNU6-953P-201ENST00000459154 RTN4Q9NQC3 1192 aaKnown RBP8.55□□□□□ -1.04
RNU6-953P-201ENST00000459154 SPDYE4A6NLX3 237 aa8.51□□□□□ -1.05
RNU6-953P-201ENST00000459154 PROM2Q8N271 834 aa8.51□□□□□ -1.05
RNU6-953P-201ENST00000459154 ABCB7O75027 752 aa8.49□□□□□ -1.05
RNU6-953P-201ENST00000459154 FBLN2P98095 1184 aa8.48□□□□□ -1.05
RNU6-953P-201ENST00000459154 AMER1Q5JTC6 1135 aaPredicted RBP8.48□□□□□ -1.05
RNU6-953P-201ENST00000459154 DSG3P32926 999 aa8.45□□□□□ -1.06
RNU6-953P-201ENST00000459154 ZBTB12Q9Y330 459 aaPredicted RBP8.4□□□□□ -1.06
RNU6-953P-201ENST00000459154 FBXO3Q9UK99 471 aa8.34□□□□□ -1.07
RNU6-953P-201ENST00000459154 VASPP50552 380 aaPredicted RBP8.29□□□□□ -1.08
RNU6-953P-201ENST00000459154 OSCARQ8IYS5 282 aa8.29□□□□□ -1.08
RNU6-953P-201ENST00000459154 CACNB1Q02641 598 aaPredicted RBP8.27□□□□□ -1.09
RNU6-953P-201ENST00000459154 SSUH2Q9Y2M2 353 aa8.27□□□□□ -1.09
RNU6-953P-201ENST00000459154 SPDYE2BA6NHP3 402 aa8.24□□□□□ -1.09
RNU6-953P-201ENST00000459154 SPDYE6P0CI01 402 aa8.24□□□□□ -1.09
RNU6-953P-201ENST00000459154 SPDYE2Q495Y8 402 aa8.24□□□□□ -1.09
RNU6-953P-201ENST00000459154 IFNLR1Q8IU57 520 aaPredicted RBP8.24□□□□□ -1.09
RNU6-953P-201ENST00000459154 ZNF692Q9BU19 519 aaPredicted RBP8.24□□□□□ -1.09
RNU6-953P-201ENST00000459154 PABPN1Q86U42 306 aaKnown RBP eCLIP8.16□□□□□ -1.1
RNU6-953P-201ENST00000459154 SLC24A1O60721 1099 aa8.13□□□□□ -1.11
RNU6-953P-201ENST00000459154 STAG3Q9UJ98 1225 aa8.12□□□□□ -1.11
RNU6-953P-201ENST00000459154 PKD2Q13563 968 aa8.09□□□□□ -1.11
RNU6-953P-201ENST00000459154 SPOCK2Q92563 424 aa8.03□□□□□ -1.12
RNU6-953P-201ENST00000459154 MIER1Q8N108 512 aa8□□□□□ -1.13
RNU6-953P-201ENST00000459154 KLHL34Q8N239 644 aa8□□□□□ -1.13
RNU6-953P-201ENST00000459154 PLCD3Q8N3E9 789 aa8□□□□□ -1.13
RNU6-953P-201ENST00000459154 AKT1S1Q96B36 256 aa7.97□□□□□ -1.13
RNU6-953P-201ENST00000459154 RBM42Q9BTD8 480 aaKnown RBP7.95□□□□□ -1.14
RNU6-953P-201ENST00000459154 REM2Q8IYK8 340 aaPredicted RBP7.91□□□□□ -1.14
RNU6-953P-201ENST00000459154 SPDYE1Q8NFV5 336 aaPredicted RBP7.91□□□□□ -1.14
RNU6-953P-201ENST00000459154 ECM2O94769 699 aaPredicted RBP7.9□□□□□ -1.14
RNU6-953P-201ENST00000459154 RGL2O15211 777 aa7.88□□□□□ -1.15
RNU6-953P-201ENST00000459154 PLCB2Q00722 1185 aa7.88□□□□□ -1.15
RNU6-953P-201ENST00000459154 CREBZFQ9NS37 354 aa7.88□□□□□ -1.15
RNU6-953P-201ENST00000459154 NPM1P06748 294 aaKnown RBP eCLIP7.87□□□□□ -1.15
RNU6-953P-201ENST00000459154 MNX1P50219 401 aaPredicted RBP7.87□□□□□ -1.15
RNU6-953P-201ENST00000459154 ZBTB47Q9UFB7 747 aaPredicted RBP7.87□□□□□ -1.15
RNU6-953P-201ENST00000459154 NUBP1P53384 320 aa7.86□□□□□ -1.15
RNU6-953P-201ENST00000459154 PLEKHG5O94827 1062 aa7.84□□□□□ -1.15
RNU6-953P-201ENST00000459154 DCAF8L2P0C7V8 631 aa7.84□□□□□ -1.15
RNU6-953P-201ENST00000459154 CLEC11AQ9Y240 323 aa7.84□□□□□ -1.15
RNU6-953P-201ENST00000459154 PITPNM1O00562 1244 aa7.83□□□□□ -1.16
RNU6-953P-201ENST00000459154 PRR29P0C7W0 189 aa7.82□□□□□ -1.16
RNU6-953P-201ENST00000459154 CIZ1Q9ULV3 898 aaPredicted RBP7.82□□□□□ -1.16
RNU6-953P-201ENST00000459154 RNF25Q96BH1 459 aaPredicted RBP7.78□□□□□ -1.16
RNU6-953P-201ENST00000459154 TRIM41Q8WV44 630 aa7.77□□□□□ -1.17
RNU6-953P-201ENST00000459154 BBXQ8WY36 941 aaPredicted RBP7.77□□□□□ -1.17
RNU6-953P-201ENST00000459154 GSE1Q14687 1217 aa7.75□□□□□ -1.17
RNU6-953P-201ENST00000459154 RASEFQ8IZ41 740 aa7.75□□□□□ -1.17
RNU6-953P-201ENST00000459154 HAP1P54257 671 aaPredicted RBP7.71□□□□□ -1.18
RNU6-953P-201ENST00000459154 DCAF8Q5TAQ9 597 aa7.71□□□□□ -1.18
RNU6-953P-201ENST00000459154 CHGAP10645 457 aaKnown RBP7.69□□□□□ -1.18
RNU6-953P-201ENST00000459154 CHRM1P11229 460 aaPredicted RBP7.69□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 7.5 ms