RNA–Protein interactions for RNA: ENST00000408569.2

U3.39-201, humanhuman

BASIC

Gene U3, Length 239 nt, Biotype snoRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U3.39-201ENST00000408569 AEBP2Q6ZN18 517 aaPredicted RBP17.41■□□□□ 0.38
U3.39-201ENST00000408569 CHIC1Q5VXU3 224 aa16.33■□□□□ 0.2
U3.39-201ENST00000408569 SENP3Q9H4L4 574 aaPredicted RBP14.97□□□□□ -0.01
U3.39-201ENST00000408569 PHF23Q9BUL5 403 aaPredicted RBP14.71□□□□□ -0.05
U3.39-201ENST00000408569 FOXD1Q16676 465 aa13.99□□□□□ -0.17
U3.39-201ENST00000408569 POTEDQ86YR6 584 aa13.68□□□□□ -0.22
U3.39-201ENST00000408569 MSH5O43196 834 aa13.28□□□□□ -0.28
U3.39-201ENST00000408569 PIAS4Q8N2W9 510 aaPredicted RBP13.01□□□□□ -0.33
U3.39-201ENST00000408569 PLPPR3Q6T4P5 718 aa12.73□□□□□ -0.37
U3.39-201ENST00000408569 PPP6R1Q9UPN7 881 aa12.73□□□□□ -0.37
U3.39-201ENST00000408569 ADRA2BP18089 450 aa12.7□□□□□ -0.38
U3.39-201ENST00000408569 MAPK8IP2Q13387 824 aaPredicted RBP11.8□□□□□ -0.52
U3.39-201ENST00000408569 DMRT2Q9Y5R5 561 aa11.77□□□□□ -0.53
U3.39-201ENST00000408569 CACNB1Q02641 598 aaPredicted RBP11.71□□□□□ -0.53
U3.39-201ENST00000408569 SCAF1Q9H7N4 1312 aaKnown RBP11.67□□□□□ -0.54
U3.39-201ENST00000408569 DCAF8L1A6NGE4 600 aa11.45□□□□□ -0.58
U3.39-201ENST00000408569 RNF39Q9H2S5 420 aa11.26□□□□□ -0.61
U3.39-201ENST00000408569 HOXD11P31277 338 aaPredicted RBP11.16□□□□□ -0.62
U3.39-201ENST00000408569 C1QBPQ07021 282 aaKnown RBP11.1□□□□□ -0.63
U3.39-201ENST00000408569 PPP4R3CPQ6ZMV5 832 aa11.09□□□□□ -0.63
U3.39-201ENST00000408569 CNKSR2Q8WXI2 1034 aa10.98□□□□□ -0.65
U3.39-201ENST00000408569 RNF216Q9NWF9 866 aaPredicted RBP10.98□□□□□ -0.65
U3.39-201ENST00000408569 DNAJC5BQ9UF47 199 aa10.82□□□□□ -0.68
U3.39-201ENST00000408569 GRWD1Q9BQ67 446 aaKnown RBP eCLIP10.74□□□□□ -0.69
U3.39-201ENST00000408569 POTEHQ6S545 545 aa10.66□□□□□ -0.7
U3.39-201ENST00000408569 NCBP3Q53F19 620 aaKnown RBP10.58□□□□□ -0.72
U3.39-201ENST00000408569 CAPN15O75808 1086 aa10.45□□□□□ -0.74
U3.39-201ENST00000408569 DSG3P32926 999 aa10.4□□□□□ -0.74
U3.39-201ENST00000408569 U3KPZ7 1027 aaPredicted RBP10.39□□□□□ -0.75
U3.39-201ENST00000408569 SPINK5Q9NQ38 1064 aaPredicted RBP10.38□□□□□ -0.75
U3.39-201ENST00000408569 NPM3O75607 178 aaKnown RBP10.37□□□□□ -0.75
U3.39-201ENST00000408569 TRHP20396 242 aaPredicted RBP10.18□□□□□ -0.78
U3.39-201ENST00000408569 ABCB7O75027 752 aa10.16□□□□□ -0.78
U3.39-201ENST00000408569 APLP2Q06481 763 aa10.11□□□□□ -0.79
U3.39-201ENST00000408569 ZNF219Q9P2Y4 722 aaPredicted RBP10.1□□□□□ -0.79
U3.39-201ENST00000408569 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP9.99□□□□□ -0.81
U3.39-201ENST00000408569 SLC4A2P04920 1241 aa9.99□□□□□ -0.81
U3.39-201ENST00000408569 HNRNPUL2Q1KMD3 747 aaKnown RBP9.99□□□□□ -0.81
U3.39-201ENST00000408569 RBM42Q9BTD8 480 aaKnown RBP9.99□□□□□ -0.81
U3.39-201ENST00000408569 CHRDL2Q6WN34 429 aa9.93□□□□□ -0.82
U3.39-201ENST00000408569 SAMD1Q6SPF0 538 aaPredicted RBP9.9□□□□□ -0.82
U3.39-201ENST00000408569 KCNA4P22459 653 aa9.8□□□□□ -0.84
U3.39-201ENST00000408569 SP7Q8TDD2 431 aaPredicted RBP9.79□□□□□ -0.84
U3.39-201ENST00000408569 POLA2Q14181 598 aa9.78□□□□□ -0.84
U3.39-201ENST00000408569 AKT1S1Q96B36 256 aa9.64□□□□□ -0.87
U3.39-201ENST00000408569 MYCNP04198 464 aaPredicted RBP9.61□□□□□ -0.87
U3.39-201ENST00000408569 HAX1O00165 279 aa9.6□□□□□ -0.87
U3.39-201ENST00000408569 PIP4P2Q8N4L2 257 aa9.58□□□□□ -0.88
U3.39-201ENST00000408569 REM2Q8IYK8 340 aaPredicted RBP9.55□□□□□ -0.88
U3.39-201ENST00000408569 ZBTB12Q9Y330 459 aaPredicted RBP9.54□□□□□ -0.88
U3.39-201ENST00000408569 PITPNM1O00562 1244 aa9.46□□□□□ -0.9
U3.39-201ENST00000408569 OSCARQ8IYS5 282 aa9.46□□□□□ -0.9
U3.39-201ENST00000408569 FXR2P51116 673 aaKnown RBP eCLIP9.43□□□□□ -0.9
U3.39-201ENST00000408569 ATF5Q9Y2D1 282 aaPredicted RBP9.41□□□□□ -0.9
U3.39-201ENST00000408569 EVX2Q03828 476 aa9.36□□□□□ -0.91
U3.39-201ENST00000408569 FOXD4L1Q9NU39 408 aa9.28□□□□□ -0.92
U3.39-201ENST00000408569 PRKAR2AP13861 404 aaKnown RBP9.24□□□□□ -0.93
U3.39-201ENST00000408569 CLEC11AQ9Y240 323 aa9.21□□□□□ -0.94
U3.39-201ENST00000408569 SLC4A1APQ9BWU0 796 aaKnown RBP9.2□□□□□ -0.94
U3.39-201ENST00000408569 LHX8Q68G74 356 aa9.19□□□□□ -0.94
U3.39-201ENST00000408569 SPDYE2BA6NHP3 402 aa9.18□□□□□ -0.94
U3.39-201ENST00000408569 SPDYE6P0CI01 402 aa9.18□□□□□ -0.94
U3.39-201ENST00000408569 SPDYE2Q495Y8 402 aa9.18□□□□□ -0.94
U3.39-201ENST00000408569 GABBR2O75899 941 aa9.16□□□□□ -0.94
U3.39-201ENST00000408569 C19orf67A6NJJ6 358 aa9.15□□□□□ -0.94
U3.39-201ENST00000408569 SPDYE1Q8NFV5 336 aaPredicted RBP9.15□□□□□ -0.94
U3.39-201ENST00000408569 FBLN2P98095 1184 aa9.14□□□□□ -0.95
U3.39-201ENST00000408569 ZNF692Q9BU19 519 aaPredicted RBP9.05□□□□□ -0.96
U3.39-201ENST00000408569 PLSCR2Q9NRY7 297 aa9.05□□□□□ -0.96
U3.39-201ENST00000408569 CHADLQ6NUI6 762 aa9.04□□□□□ -0.96
U3.39-201ENST00000408569 ATXN8OSP0DMR3 200 aa9.01□□□□□ -0.97
U3.39-201ENST00000408569 PRR29P0C7W0 189 aa8.98□□□□□ -0.97
U3.39-201ENST00000408569 SSUH2Q9Y2M2 353 aa8.97□□□□□ -0.97
U3.39-201ENST00000408569 ZBTB22O15209 634 aa8.96□□□□□ -0.98
U3.39-201ENST00000408569 MKRN4PQ13434 485 aaPredicted RBP8.94□□□□□ -0.98
U3.39-201ENST00000408569 CD44P16070 742 aaKnown RBP8.92□□□□□ -0.98
U3.39-201ENST00000408569 POTEIP0CG38 1075 aa8.91□□□□□ -0.98
U3.39-201ENST00000408569 PABPN1Q86U42 306 aaKnown RBP eCLIP8.89□□□□□ -0.99
U3.39-201ENST00000408569 DCBLD2Q96PD2 775 aa8.88□□□□□ -0.99
U3.39-201ENST00000408569 FARP1Q9Y4F1 1045 aaPredicted RBP8.85□□□□□ -0.99
U3.39-201ENST00000408569 CLCN6P51797 869 aa8.84□□□□□ -0.99
U3.39-201ENST00000408569 ZRANB1Q9UGI0 708 aa8.74□□□□□ -1.01
U3.39-201ENST00000408569 ZNF579Q8NAF0 562 aaKnown RBP8.71□□□□□ -1.02
U3.39-201ENST00000408569 OTUD5Q96G74 571 aa8.69□□□□□ -1.02
U3.39-201ENST00000408569 POTEMA6NI47 508 aa8.68□□□□□ -1.02
U3.39-201ENST00000408569 GALR2O43603 387 aaPredicted RBP8.66□□□□□ -1.02
U3.39-201ENST00000408569 POTEGQ6S5H5 508 aa8.65□□□□□ -1.02
U3.39-201ENST00000408569 POTEB2H3BUK9 544 aa8.62□□□□□ -1.03
U3.39-201ENST00000408569 PAK3O75914 559 aaPredicted RBP8.6□□□□□ -1.03
U3.39-201ENST00000408569 CREBZFQ9NS37 354 aa8.58□□□□□ -1.04
U3.39-201ENST00000408569 PHF12Q96QT6 1004 aa8.56□□□□□ -1.04
U3.39-201ENST00000408569 STAG3Q9UJ98 1225 aa8.55□□□□□ -1.04
U3.39-201ENST00000408569 PCDH10Q9P2E7 1040 aa8.54□□□□□ -1.04
U3.39-201ENST00000408569 PELP1Q8IZL8 1130 aaKnown RBP8.52□□□□□ -1.05
U3.39-201ENST00000408569 METRNQ9UJH8 293 aa8.49□□□□□ -1.05
U3.39-201ENST00000408569 NPM1P06748 294 aaKnown RBP eCLIP8.48□□□□□ -1.05
U3.39-201ENST00000408569 MAMSTRQ6ZN01 415 aa8.47□□□□□ -1.05
U3.39-201ENST00000408569 SLC39A7Q92504 469 aa8.46□□□□□ -1.06
U3.39-201ENST00000408569 FAM163AQ96GL9 167 aaPredicted RBP8.46□□□□□ -1.06
U3.39-201ENST00000408569 C7P10643 843 aa8.45□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms