Protein–RNA interactions for Protein: Q5TA78

LCE4A, Late cornified envelope protein 4A, humanhuman

Predictions only

Length 99 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LCE4AQ5TA78 LIMA1-214ENST00000552783 3612 ntAPPRIS ALT2 TSL 1 (best) BASIC2.24□□□□□ -2.05
LCE4AQ5TA78 SPATA17-201ENST00000366933 5818 ntAPPRIS P1 TSL 1 (best) BASIC2.24□□□□□ -2.05
LCE4AQ5TA78 FBXO11-201ENST00000402508 3844 ntAPPRIS P1 TSL 1 (best) BASIC2.24□□□□□ -2.05
LCE4AQ5TA78 FBXW7-203ENST00000296555 3572 ntTSL 1 (best) BASIC2.24□□□□□ -2.05
LCE4AQ5TA78 ARHGAP11A-207ENST00000565905 3318 ntTSL 2 BASIC2.24□□□□□ -2.05
LCE4AQ5TA78 DDR2-201ENST00000367921 3096 ntAPPRIS P1 TSL 1 (best) BASIC2.24□□□□□ -2.05
LCE4AQ5TA78 LY86-AS1-202ENST00000435641 2819 ntTSL 2 BASIC2.24□□□□□ -2.05
LCE4AQ5TA78 LIG3-202ENST00000378526 8400 ntAPPRIS P4 TSL 1 (best) BASIC2.24□□□□□ -2.05
LCE4AQ5TA78 STON1-GTF2A1L-203ENST00000402114 3790 ntTSL 2 BASIC2.24□□□□□ -2.05
LCE4AQ5TA78 OR5A2-202ENST00000641361 6655 ntAPPRIS P1 BASIC2.24□□□□□ -2.05
LCE4AQ5TA78 ZNF300-201ENST00000274599 3268 ntAPPRIS P3 TSL 1 (best) BASIC2.24□□□□□ -2.05
LCE4AQ5TA78 LINC00652-201ENST00000412553 3299 ntTSL 1 (best) BASIC2.24□□□□□ -2.05
LCE4AQ5TA78 OR2J3-202ENST00000641151 3297 ntAPPRIS P1 BASIC2.24□□□□□ -2.05
LCE4AQ5TA78 TRPS1-212ENST00000640765 9514 ntTSL 2 BASIC2.24□□□□□ -2.05
LCE4AQ5TA78 NLGN4X-204ENST00000381095 5870 ntAPPRIS P2 TSL 1 (best) BASIC2.24□□□□□ -2.05
LCE4AQ5TA78 PTK2-201ENST00000340930 4414 ntTSL 2 BASIC2.24□□□□□ -2.05
LCE4AQ5TA78 BDNF-209ENST00000420794 4176 ntAPPRIS P1 TSL 1 (best) BASIC2.24□□□□□ -2.05
LCE4AQ5TA78 AC074141.1-201ENST00000588129 2995 ntBASIC2.24□□□□□ -2.05
LCE4AQ5TA78 MYLK4-201ENST00000274643 5806 ntAPPRIS P1 TSL 1 (best) BASIC2.24□□□□□ -2.05
LCE4AQ5TA78 CHD2-201ENST00000394196 9363 ntAPPRIS P1 TSL 5 BASIC2.24□□□□□ -2.05
LCE4AQ5TA78 MECOM-208ENST00000468789 3691 ntAPPRIS P3 TSL 2 BASIC2.24□□□□□ -2.05
LCE4AQ5TA78 DIS3-205ENST00000545453 3651 ntTSL 1 (best) BASIC2.24□□□□□ -2.05
LCE4AQ5TA78 LRRTM3-201ENST00000361320 4358 ntAPPRIS P1 TSL 1 (best) BASIC2.24□□□□□ -2.05
LCE4AQ5TA78 SORBS2-230ENST00000448662 4356 ntTSL 2 BASIC2.24□□□□□ -2.05
LCE4AQ5TA78 RABEP1-201ENST00000341923 2490 ntTSL 1 (best) BASIC2.24□□□□□ -2.05
LCE4AQ5TA78 PDLIM5-222ENST00000615540 6219 ntTSL 1 (best) BASIC2.24□□□□□ -2.05
LCE4AQ5TA78 HERC3-201ENST00000264345 4764 ntAPPRIS P1 TSL 1 (best) BASIC2.24□□□□□ -2.05
LCE4AQ5TA78 DST-207ENST00000421834 18030 ntAPPRIS ALT2 TSL 5 BASIC2.24□□□□□ -2.05
LCE4AQ5TA78 RNY1P13-201ENST00000365030 105 ntBASIC2.24□□□□□ -2.05
LCE4AQ5TA78 SNORA68-201ENST00000384437 133 ntBASIC2.24□□□□□ -2.05
LCE4AQ5TA78 MRPS21P5-201ENST00000417885 231 ntBASIC2.24□□□□□ -2.05
LCE4AQ5TA78 LINC01638-201ENST00000418271 552 ntTSL 3 BASIC2.24□□□□□ -2.05
LCE4AQ5TA78 AL357552.1-201ENST00000445254 415 ntBASIC2.24□□□□□ -2.05
LCE4AQ5TA78 snoU13.16-201ENST00000459350 104 ntBASIC2.24□□□□□ -2.05
LCE4AQ5TA78 RN7SL297P-201ENST00000483161 293 ntBASIC2.24□□□□□ -2.05
LCE4AQ5TA78 AP006245.2-201ENST00000522004 300 ntBASIC2.24□□□□□ -2.05
LCE4AQ5TA78 IGHV3-75-201ENST00000523951 358 ntBASIC2.24□□□□□ -2.05
LCE4AQ5TA78 AC244502.3-201ENST00000555460 457 ntTSL 3 BASIC2.24□□□□□ -2.05
LCE4AQ5TA78 AC090181.1-201ENST00000560446 264 ntTSL 3 BASIC2.24□□□□□ -2.05
LCE4AQ5TA78 AC023813.1-201ENST00000565055 306 ntTSL 5 BASIC2.24□□□□□ -2.05
LCE4AQ5TA78 AC009962.1-201ENST00000567327 3813 ntBASIC2.24□□□□□ -2.05
LCE4AQ5TA78 RN7SL475P-201ENST00000583379 298 ntBASIC2.24□□□□□ -2.05
LCE4AQ5TA78 AL136084.2-212ENST00000589976 654 ntTSL 5 BASIC2.24□□□□□ -2.05
LCE4AQ5TA78 MIR8055-201ENST00000610739 97 ntBASIC2.24□□□□□ -2.05
LCE4AQ5TA78 SPRY4-IT1_2.1-201ENST00000612613 121 ntBASIC2.24□□□□□ -2.05
LCE4AQ5TA78 AC004241.2-201ENST00000614562 444 ntBASIC2.24□□□□□ -2.05
LCE4AQ5TA78 SNX18P1Y-201ENST00000616231 511 ntBASIC2.24□□□□□ -2.05
LCE4AQ5TA78 AC243994.1-201ENST00000618627 109 ntBASIC2.24□□□□□ -2.05
LCE4AQ5TA78 AC024884.1-201ENST00000620583 399 ntBASIC2.24□□□□□ -2.05
LCE4AQ5TA78 Metazoa_SRP.130-201ENST00000622625 267 ntBASIC2.24□□□□□ -2.05
LCE4AQ5TA78 CR392039.5-201ENST00000623201 510 ntBASIC2.24□□□□□ -2.05
LCE4AQ5TA78 WDR11-201ENST00000263461 4732 ntAPPRIS P1 TSL 1 (best) BASIC2.24□□□□□ -2.05
LCE4AQ5TA78 DICER1-212ENST00000541352 5621 ntTSL 1 (best) BASIC2.24□□□□□ -2.05
LCE4AQ5TA78 DPY19L2P1-203ENST00000458672 3347 ntTSL 1 (best) BASIC2.24□□□□□ -2.05
LCE4AQ5TA78 SLC35A3-207ENST00000533028 14759 ntAPPRIS P1 TSL 1 (best) BASIC2.24□□□□□ -2.05
LCE4AQ5TA78 ORC1-201ENST00000371566 3080 ntAPPRIS P1 TSL 1 (best) BASIC2.24□□□□□ -2.05
LCE4AQ5TA78 PLAGL1-202ENST00000360537 4430 ntAPPRIS P1 TSL 5 BASIC2.24□□□□□ -2.05
LCE4AQ5TA78 KIAA1328-201ENST00000280020 4853 ntAPPRIS P1 TSL 1 (best) BASIC2.24□□□□□ -2.05
LCE4AQ5TA78 KIAA0753-201ENST00000361413 4859 ntAPPRIS P2 TSL 1 (best) BASIC2.24□□□□□ -2.05
LCE4AQ5TA78 MED23-202ENST00000368053 2811 ntTSL 1 (best) BASIC2.24□□□□□ -2.05
LCE4AQ5TA78 PLS3-202ENST00000355899 3280 ntAPPRIS P1 TSL 1 (best) BASIC2.24□□□□□ -2.05
LCE4AQ5TA78 PRDM11-206ENST00000622142 10730 ntAPPRIS ALT2 TSL 5 BASIC2.24□□□□□ -2.05
LCE4AQ5TA78 C1orf141-208ENST00000621590 4179 ntAPPRIS ALT2 TSL 5 BASIC2.24□□□□□ -2.05
LCE4AQ5TA78 MFSD6-201ENST00000281416 4608 ntAPPRIS P1 TSL 1 (best) BASIC2.24□□□□□ -2.05
LCE4AQ5TA78 SMARCA1-203ENST00000371123 3948 ntAPPRIS ALT2 TSL 1 (best) BASIC2.24□□□□□ -2.05
LCE4AQ5TA78 TPP2-202ENST00000376065 3931 ntAPPRIS P1 TSL 1 (best) BASIC2.24□□□□□ -2.05
LCE4AQ5TA78 FAM111B-201ENST00000343597 3488 ntAPPRIS P1 TSL 1 (best) BASIC2.24□□□□□ -2.05
LCE4AQ5TA78 ASB5-201ENST00000296525 3031 ntAPPRIS P1 TSL 1 (best) BASIC2.24□□□□□ -2.05
LCE4AQ5TA78 PROM1-206ENST00000505450 4349 ntAPPRIS ALT2 TSL 1 (best) BASIC2.24□□□□□ -2.05
LCE4AQ5TA78 ODF2-201ENST00000351030 3899 ntAPPRIS ALT1 TSL 2 BASIC2.24□□□□□ -2.05
LCE4AQ5TA78 HYDIN-201ENST00000288168 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC2.24□□□□□ -2.05
LCE4AQ5TA78 ADGRF5-202ENST00000283296 5810 ntAPPRIS P1 TSL 1 (best) BASIC2.24□□□□□ -2.05
LCE4AQ5TA78 JAKMIP2-201ENST00000265272 6001 ntAPPRIS P3 TSL 1 (best) BASIC2.24□□□□□ -2.05
LCE4AQ5TA78 AC068490.1-202ENST00000637384 3185 ntTSL 5 BASIC2.24□□□□□ -2.05
LCE4AQ5TA78 DDX46-201ENST00000354283 3821 ntAPPRIS P1 TSL 1 (best) BASIC2.24□□□□□ -2.05
LCE4AQ5TA78 PARD3B-213ENST00000614500 7538 ntTSL 5 BASIC2.24□□□□□ -2.05
LCE4AQ5TA78 PLEKHA5-215ENST00000539256 3357 ntTSL 2 BASIC2.24□□□□□ -2.05
LCE4AQ5TA78 MYLK-206ENST00000418370 7282 ntTSL 1 (best) BASIC2.24□□□□□ -2.05
LCE4AQ5TA78 HELQ-201ENST00000295488 3579 ntAPPRIS P1 TSL 1 (best) BASIC2.24□□□□□ -2.05
LCE4AQ5TA78 ATF6-201ENST00000367942 7496 ntAPPRIS P1 TSL 1 (best) BASIC2.24□□□□□ -2.05
LCE4AQ5TA78 HPS4-201ENST00000336873 3786 ntAPPRIS P1 TSL 5 BASIC2.24□□□□□ -2.05
LCE4AQ5TA78 ZNF780B-201ENST00000221355 3538 ntTSL 2 BASIC2.24□□□□□ -2.05
LCE4AQ5TA78 PLP1-221ENST00000619236 2896 ntTSL 1 (best) BASIC2.24□□□□□ -2.05
LCE4AQ5TA78 PTK2B-205ENST00000420218 3941 ntTSL 5 BASIC2.23□□□□□ -2.05
LCE4AQ5TA78 CHRM3-201ENST00000255380 8780 ntAPPRIS P1 TSL 1 (best) BASIC2.23□□□□□ -2.05
LCE4AQ5TA78 LTBP1-201ENST00000402934 4948 ntAPPRIS ALT2 TSL 5 BASIC2.23□□□□□ -2.05
LCE4AQ5TA78 ZNF185-202ENST00000318529 3878 ntAPPRIS ALT2 TSL 2 BASIC2.23□□□□□ -2.05
LCE4AQ5TA78 ABCA6-201ENST00000284425 5300 ntAPPRIS P1 TSL 1 (best) BASIC2.23□□□□□ -2.05
LCE4AQ5TA78 TEX10-204ENST00000535814 3006 ntTSL 2 BASIC2.23□□□□□ -2.05
LCE4AQ5TA78 CD46-203ENST00000354848 3233 ntAPPRIS ALT2 TSL 1 (best) BASIC2.23□□□□□ -2.05
LCE4AQ5TA78 ADGRF2-202ENST00000398742 4895 ntAPPRIS P1 TSL 5 BASIC2.23□□□□□ -2.05
LCE4AQ5TA78 GALK2-201ENST00000327171 5299 ntTSL 1 (best) BASIC2.23□□□□□ -2.05
LCE4AQ5TA78 GUCY2C-201ENST00000261170 3844 ntAPPRIS P1 TSL 1 (best) BASIC2.23□□□□□ -2.05
LCE4AQ5TA78 CCR6-201ENST00000341935 4018 ntAPPRIS P1 TSL 1 (best) BASIC2.23□□□□□ -2.05
LCE4AQ5TA78 PLEKHA5-201ENST00000299275 4238 ntAPPRIS P3 TSL 1 (best) BASIC2.23□□□□□ -2.05
LCE4AQ5TA78 ZNF544-216ENST00000600044 2784 ntAPPRIS ALT2 TSL 4 BASIC2.23□□□□□ -2.05
LCE4AQ5TA78 RASGRP3-202ENST00000403687 4807 ntAPPRIS P3 TSL 1 (best) BASIC2.23□□□□□ -2.05
LCE4AQ5TA78 TMPRSS4-AS1-204ENST00000636151 3397 ntAPPRIS P1 TSL 5 BASIC2.23□□□□□ -2.05
LCE4AQ5TA78 PHYHIPL-201ENST00000373878 3569 ntTSL 1 (best) BASIC2.23□□□□□ -2.05
LCE4AQ5TA78 PHYHIPL-202ENST00000373880 3578 ntAPPRIS P1 TSL 1 (best) BASIC2.23□□□□□ -2.05
Retrieved 100 of 98,524 protein–RNA pairs in 121.9 ms