Protein–RNA interactions for Protein: Q9Y6Z2

LINC01558, Uncharacterized protein encoded by LINC01558, humanhuman

Predictions only

Length 57 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01558Q9Y6Z2 GSPT1-202ENST00000434724 7105 ntAPPRIS P4 TSL 1 (best) BASIC9.89□□□□□ -0.83
LINC01558Q9Y6Z2 MOB3C-202ENST00000319928 2822 ntAPPRIS P1 TSL 2 BASIC9.89□□□□□ -0.83
LINC01558Q9Y6Z2 PDGFA-203ENST00000402802 2305 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
LINC01558Q9Y6Z2 MCF2L2-201ENST00000328913 4980 ntAPPRIS P2 TSL 5 BASIC9.89□□□□□ -0.83
LINC01558Q9Y6Z2 CORO1B-201ENST00000341356 1881 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
LINC01558Q9Y6Z2 RHOC-202ENST00000339083 1418 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
LINC01558Q9Y6Z2 RHOBTB3-206ENST00000506817 1432 ntTSL 2 BASIC9.89□□□□□ -0.83
LINC01558Q9Y6Z2 STK35-201ENST00000381482 6685 ntAPPRIS P1 TSL 5 BASIC9.89□□□□□ -0.83
LINC01558Q9Y6Z2 PNO1-201ENST00000263657 2286 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
LINC01558Q9Y6Z2 RNASEH2B-201ENST00000336617 1629 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
LINC01558Q9Y6Z2 RGS7-203ENST00000366564 2295 ntAPPRIS ALT2 TSL 1 (best) BASIC9.89□□□□□ -0.83
LINC01558Q9Y6Z2 C1QTNF1-202ENST00000339142 3100 ntAPPRIS P1 TSL 5 BASIC9.89□□□□□ -0.83
LINC01558Q9Y6Z2 PTGER3-208ENST00000370932 1841 ntAPPRIS ALT2 TSL 5 BASIC9.89□□□□□ -0.83
LINC01558Q9Y6Z2 TINAGL1-211ENST00000537531 1841 ntAPPRIS ALT2 TSL 5 BASIC9.89□□□□□ -0.83
LINC01558Q9Y6Z2 AC007495.1-201ENST00000501259 2678 ntTSL 1 (best) BASIC9.89□□□□□ -0.83
LINC01558Q9Y6Z2 CTSB-228ENST00000533455 2009 ntAPPRIS P1 TSL 1 (best) BASIC9.89□□□□□ -0.83
LINC01558Q9Y6Z2 VOPP1-207ENST00000428648 2866 ntTSL 2 BASIC9.89□□□□□ -0.83
LINC01558Q9Y6Z2 ROBO1-209ENST00000495273 5600 ntAPPRIS P3 TSL 1 (best) BASIC9.88□□□□□ -0.83
LINC01558Q9Y6Z2 NRP1-204ENST00000374822 2213 ntTSL 1 (best) BASIC9.88□□□□□ -0.83
LINC01558Q9Y6Z2 LMNB1-202ENST00000395354 1572 ntTSL 1 (best) BASIC9.88□□□□□ -0.83
LINC01558Q9Y6Z2 ZAR1L-202ENST00000533490 1564 ntAPPRIS P1 TSL 5 BASIC9.88□□□□□ -0.83
LINC01558Q9Y6Z2 HDAC10-222ENST00000626012 2607 ntTSL 5 BASIC9.88□□□□□ -0.83
LINC01558Q9Y6Z2 XPO1-201ENST00000401558 4915 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
LINC01558Q9Y6Z2 BACE1-211ENST00000528053 4083 ntTSL 5 BASIC9.88□□□□□ -0.83
LINC01558Q9Y6Z2 RASSF1-201ENST00000327761 1757 ntTSL 1 (best) BASIC9.88□□□□□ -0.83
LINC01558Q9Y6Z2 SUSD4-204ENST00000366878 3025 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
LINC01558Q9Y6Z2 TMEM191A-208ENST00000450925 1961 ntTSL 2 BASIC9.88□□□□□ -0.83
LINC01558Q9Y6Z2 SLC35A3-222ENST00000640715 1989 ntTSL 5 BASIC9.88□□□□□ -0.83
LINC01558Q9Y6Z2 SH3GL1-206ENST00000598564 2194 ntTSL 2 BASIC9.88□□□□□ -0.83
LINC01558Q9Y6Z2 ANTXR1-201ENST00000303714 5859 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
LINC01558Q9Y6Z2 KIRREL2-205ENST00000592409 2563 ntAPPRIS ALT2 TSL 1 (best) BASIC9.88□□□□□ -0.83
LINC01558Q9Y6Z2 AC023824.1-201ENST00000562945 2975 ntBASIC9.88□□□□□ -0.83
LINC01558Q9Y6Z2 CD1E-205ENST00000368160 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC9.88□□□□□ -0.83
LINC01558Q9Y6Z2 IKZF1-209ENST00000438033 1748 ntTSL 2 BASIC9.88□□□□□ -0.83
LINC01558Q9Y6Z2 EARS2-206ENST00000563232 1709 ntTSL 1 (best) BASIC9.88□□□□□ -0.83
LINC01558Q9Y6Z2 POLR1D-220ENST00000637071 1943 ntTSL 5 BASIC9.88□□□□□ -0.83
LINC01558Q9Y6Z2 PCDH19-202ENST00000373034 9756 ntAPPRIS ALT2 TSL 1 (best) BASIC9.88□□□□□ -0.83
LINC01558Q9Y6Z2 KDM3A-201ENST00000312912 4886 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
LINC01558Q9Y6Z2 CACNB3-201ENST00000301050 2696 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
LINC01558Q9Y6Z2 DIABLO-204ENST00000413918 1859 ntTSL 2 BASIC9.88□□□□□ -0.83
LINC01558Q9Y6Z2 RBFOX1-204ENST00000422070 1684 ntTSL 2 BASIC9.88□□□□□ -0.83
LINC01558Q9Y6Z2 GNG10-201ENST00000374293 1491 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
LINC01558Q9Y6Z2 NAPA-210ENST00000595227 1460 ntTSL 3 BASIC9.88□□□□□ -0.83
LINC01558Q9Y6Z2 TXN-202ENST00000374517 869 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
LINC01558Q9Y6Z2 GSKIP-207ENST00000556095 3834 ntAPPRIS P1 TSL 2 BASIC9.88□□□□□ -0.83
LINC01558Q9Y6Z2 ZNF425-201ENST00000378061 3220 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
LINC01558Q9Y6Z2 KCNA5-201ENST00000252321 2800 ntAPPRIS P1 BASIC9.88□□□□□ -0.83
LINC01558Q9Y6Z2 FGFR4-202ENST00000393637 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC9.88□□□□□ -0.83
LINC01558Q9Y6Z2 MARVELD3-202ENST00000299952 2214 ntAPPRIS ALT2 TSL 2 BASIC9.88□□□□□ -0.83
LINC01558Q9Y6Z2 NDRG2-242ENST00000555158 2216 ntAPPRIS ALT1 TSL 1 (best) BASIC9.88□□□□□ -0.83
LINC01558Q9Y6Z2 EIF2AK4-201ENST00000263791 5499 ntAPPRIS P1 TSL 2 BASIC9.88□□□□□ -0.83
LINC01558Q9Y6Z2 CARNS1-205ENST00000531040 2968 ntTSL 5 BASIC9.88□□□□□ -0.83
LINC01558Q9Y6Z2 AGK-211ENST00000629555 2765 ntTSL 5 BASIC9.88□□□□□ -0.83
LINC01558Q9Y6Z2 AC068587.6-202ENST00000641839 5619 ntBASIC9.88□□□□□ -0.83
LINC01558Q9Y6Z2 QRICH1-202ENST00000395443 3549 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
LINC01558Q9Y6Z2 PPP1R7-201ENST00000234038 2386 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
LINC01558Q9Y6Z2 C1orf35-201ENST00000272139 1427 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
LINC01558Q9Y6Z2 WDTC1-202ENST00000361771 4275 ntAPPRIS P3 TSL 1 (best) BASIC9.88□□□□□ -0.83
LINC01558Q9Y6Z2 LRRFIP2-209ENST00000440230 1989 ntTSL 5 BASIC9.88□□□□□ -0.83
LINC01558Q9Y6Z2 CDK8-201ENST00000381527 3055 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
LINC01558Q9Y6Z2 TTC8-202ENST00000345383 2329 ntTSL 5 BASIC9.88□□□□□ -0.83
LINC01558Q9Y6Z2 AC009237.14-201ENST00000609975 1594 ntBASIC9.88□□□□□ -0.83
LINC01558Q9Y6Z2 CXorf38-201ENST00000327877 2118 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
LINC01558Q9Y6Z2 LCK-202ENST00000336890 2117 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
LINC01558Q9Y6Z2 BECN1-201ENST00000361523 2112 ntAPPRIS P1 TSL 1 (best) BASIC9.88□□□□□ -0.83
LINC01558Q9Y6Z2 ACTN4-202ENST00000390009 2102 ntTSL 1 (best) BASIC9.88□□□□□ -0.83
LINC01558Q9Y6Z2 SLC34A1-204ENST00000512593 1912 ntTSL 2 BASIC9.88□□□□□ -0.83
LINC01558Q9Y6Z2 GALNT16-202ENST00000448469 2270 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
LINC01558Q9Y6Z2 AKR7A3-201ENST00000361640 1710 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
LINC01558Q9Y6Z2 FERMT2-204ENST00000399304 2082 ntTSL 1 (best) BASIC9.87□□□□□ -0.83
LINC01558Q9Y6Z2 SHISA6-202ENST00000409168 7262 ntAPPRIS ALT2 TSL 1 (best) BASIC9.87□□□□□ -0.83
LINC01558Q9Y6Z2 TLE2-202ENST00000426948 2406 ntTSL 5 BASIC9.87□□□□□ -0.83
LINC01558Q9Y6Z2 RGS12-203ENST00000344733 5469 ntAPPRIS P4 TSL 1 (best) BASIC9.87□□□□□ -0.83
LINC01558Q9Y6Z2 FAM69C-201ENST00000343998 3671 ntAPPRIS P1 TSL 5 BASIC9.87□□□□□ -0.83
LINC01558Q9Y6Z2 ATRNL1-201ENST00000355044 8479 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
LINC01558Q9Y6Z2 PRRX1-202ENST00000367760 2217 ntTSL 1 (best) BASIC9.87□□□□□ -0.83
LINC01558Q9Y6Z2 PTK6-202ENST00000542869 2931 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
LINC01558Q9Y6Z2 RNF2-201ENST00000367509 1677 ntTSL 2 BASIC9.87□□□□□ -0.83
LINC01558Q9Y6Z2 LRRC3B-201ENST00000396641 1696 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
LINC01558Q9Y6Z2 FGF4-201ENST00000168712 3233 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
LINC01558Q9Y6Z2 HSPA1B-201ENST00000375650 2521 ntAPPRIS P1 BASIC9.87□□□□□ -0.83
LINC01558Q9Y6Z2 SLA2-202ENST00000360672 2171 ntTSL 5 BASIC9.87□□□□□ -0.83
LINC01558Q9Y6Z2 PACSIN3-201ENST00000298838 1843 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
LINC01558Q9Y6Z2 NEURL3-204ENST00000451794 1461 ntAPPRIS P1 TSL 5 BASIC9.87□□□□□ -0.83
LINC01558Q9Y6Z2 IKBKG-211ENST00000615874 1460 ntTSL 5 BASIC9.87□□□□□ -0.83
LINC01558Q9Y6Z2 IKBKG-215ENST00000619941 1463 ntTSL 5 BASIC9.87□□□□□ -0.83
LINC01558Q9Y6Z2 C5orf30-201ENST00000319933 3049 ntAPPRIS P1 TSL 1 (best) BASIC9.87□□□□□ -0.83
LINC01558Q9Y6Z2 TRIM46-203ENST00000368383 2666 ntTSL 5 BASIC9.87□□□□□ -0.83
LINC01558Q9Y6Z2 NAA50-201ENST00000240922 6135 ntAPPRIS P3 TSL 1 (best) BASIC9.87□□□□□ -0.83
LINC01558Q9Y6Z2 NAP1L4-222ENST00000620138 2479 ntTSL 2 BASIC9.87□□□□□ -0.83
LINC01558Q9Y6Z2 IZUMO4-202ENST00000395301 1021 ntAPPRIS ALT2 TSL 1 (best) BASIC9.87□□□□□ -0.83
LINC01558Q9Y6Z2 UBFD1-208ENST00000567264 642 ntAPPRIS ALT2 TSL 5 BASIC9.87□□□□□ -0.83
LINC01558Q9Y6Z2 NRG1-221ENST00000614767 762 ntTSL 5 BASIC9.87□□□□□ -0.83
LINC01558Q9Y6Z2 CHML-204ENST00000638121 920 ntTSL 2 BASIC9.87□□□□□ -0.83
LINC01558Q9Y6Z2 FAM228A-201ENST00000295150 1774 ntAPPRIS P2 TSL 1 (best) BASIC9.87□□□□□ -0.83
LINC01558Q9Y6Z2 ITGB2-AS1-202ENST00000441379 2282 ntTSL 1 (best) BASIC9.87□□□□□ -0.83
LINC01558Q9Y6Z2 KDM6B-202ENST00000448097 5422 ntAPPRIS ALT2 TSL 5 BASIC9.87□□□□□ -0.83
LINC01558Q9Y6Z2 AC074117.1-201ENST00000447070 3060 ntTSL 2 BASIC9.87□□□□□ -0.83
LINC01558Q9Y6Z2 RBM14-RBM4-201ENST00000412278 1566 ntAPPRIS P1 TSL 2 BASIC9.87□□□□□ -0.83
LINC01558Q9Y6Z2 ELP5-214ENST00000574993 2209 ntTSL 1 (best) BASIC9.87□□□□□ -0.83
Retrieved 100 of 98,524 protein–RNA pairs in 27.6 ms