Protein–RNA interactions for Protein: Q9Y5B0

CTDP1, RNA polymerase II subunit A C-terminal domain phosphatase, humanhuman

Predicted RBP Predictions only

Length 961 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTDP1Q9Y5B0 ADGRA3-204ENST00000502482 2870 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
CTDP1Q9Y5B0 MPG-201ENST00000219431 1193 ntAPPRIS P4 TSL 3 BASIC21.99■■□□□ 1.11
CTDP1Q9Y5B0 UPK3B-201ENST00000257632 1296 ntAPPRIS P5 TSL 2 BASIC21.99■■□□□ 1.11
CTDP1Q9Y5B0 AL359747.1-201ENST00000442370 536 ntTSL 2 BASIC21.99■■□□□ 1.11
CTDP1Q9Y5B0 RBPMS-AS1-202ENST00000519753 1031 ntTSL 5 BASIC21.99■■□□□ 1.11
CTDP1Q9Y5B0 AP006621.4-201ENST00000527021 532 ntTSL 5 BASIC21.99■■□□□ 1.11
CTDP1Q9Y5B0 AC022154.1-201ENST00000600303 766 ntTSL 3 BASIC21.99■■□□□ 1.11
CTDP1Q9Y5B0 AC091076.1-201ENST00000610741 619 ntBASIC21.99■■□□□ 1.11
CTDP1Q9Y5B0 AC243829.1-201ENST00000615128 1059 ntTSL 2 BASIC21.99■■□□□ 1.11
CTDP1Q9Y5B0 APPL2-201ENST00000258530 3239 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
CTDP1Q9Y5B0 CLDN5-201ENST00000403084 2357 ntBASIC21.99■■□□□ 1.11
CTDP1Q9Y5B0 PER3-203ENST00000377541 1524 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
CTDP1Q9Y5B0 PLBD1-201ENST00000240617 2426 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
CTDP1Q9Y5B0 NDUFB9-206ENST00000522532 1319 ntTSL 2 BASIC21.99■■□□□ 1.11
CTDP1Q9Y5B0 COPS7A-222ENST00000626119 1768 ntTSL 3 BASIC21.99■■□□□ 1.11
CTDP1Q9Y5B0 DNAAF3-207ENST00000527223 2228 ntAPPRIS ALT2 TSL 2 BASIC21.99■■□□□ 1.11
CTDP1Q9Y5B0 LPAR1-201ENST00000358883 2687 ntAPPRIS P2 TSL 2 BASIC21.99■■□□□ 1.11
CTDP1Q9Y5B0 GPR42-201ENST00000454971 1804 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
CTDP1Q9Y5B0 B3GALNT2-201ENST00000313984 1874 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
CTDP1Q9Y5B0 TMC5-203ENST00000396229 4917 ntAPPRIS ALT2 TSL 5 BASIC21.98■■□□□ 1.11
CTDP1Q9Y5B0 OPN3-201ENST00000366554 2620 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
CTDP1Q9Y5B0 ACBD4-215ENST00000592162 1684 ntTSL 5 BASIC21.98■■□□□ 1.11
CTDP1Q9Y5B0 ZNF707-201ENST00000358656 2183 ntAPPRIS P1 TSL 2 BASIC21.98■■□□□ 1.11
CTDP1Q9Y5B0 APBB3-203ENST00000357560 2218 ntAPPRIS P3 TSL 5 BASIC21.98■■□□□ 1.11
CTDP1Q9Y5B0 SAYSD1-201ENST00000229903 2020 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
CTDP1Q9Y5B0 SDHAP1-207ENST00000440850 2000 ntBASIC21.98■■□□□ 1.11
CTDP1Q9Y5B0 ZFC3H1-206ENST00000548100 1771 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
CTDP1Q9Y5B0 CACNA1A-247ENST00000637769 8648 ntAPPRIS ALT2 TSL 1 (best) BASIC21.98■■□□□ 1.11
CTDP1Q9Y5B0 PTMS-201ENST00000309083 1139 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
CTDP1Q9Y5B0 TMEM240-201ENST00000378733 718 ntAPPRIS P1 TSL 2 BASIC21.98■■□□□ 1.11
CTDP1Q9Y5B0 DDRGK1-202ENST00000380201 1128 ntTSL 2 BASIC21.98■■□□□ 1.11
CTDP1Q9Y5B0 MALL-203ENST00000427178 1070 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
CTDP1Q9Y5B0 AC004540.1-201ENST00000439120 891 ntTSL 2 BASIC21.98■■□□□ 1.11
CTDP1Q9Y5B0 TSPY23P-201ENST00000440136 739 ntBASIC21.98■■□□□ 1.11
CTDP1Q9Y5B0 AL359075.1-203ENST00000462729 1002 ntBASIC21.98■■□□□ 1.11
CTDP1Q9Y5B0 SSSCA1-206ENST00000531405 879 ntTSL 2 BASIC21.98■■□□□ 1.11
CTDP1Q9Y5B0 C17orf62-221ENST00000581196 668 ntTSL 4 BASIC21.98■■□□□ 1.11
CTDP1Q9Y5B0 TNFRSF19-202ENST00000382258 1625 ntAPPRIS P4 TSL 1 (best) BASIC21.98■■□□□ 1.11
CTDP1Q9Y5B0 NFE2L1-204ENST00000536222 2172 ntTSL 2 BASIC21.98■■□□□ 1.11
CTDP1Q9Y5B0 TAF15-215ENST00000605844 2191 ntAPPRIS P3 TSL 1 (best) BASIC21.98■■□□□ 1.11
CTDP1Q9Y5B0 CHST11-201ENST00000303694 5709 ntAPPRIS P3 TSL 1 (best) BASIC21.98■■□□□ 1.11
CTDP1Q9Y5B0 CRYBB2P1-202ENST00000382734 1364 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
CTDP1Q9Y5B0 FAM3C-201ENST00000359943 2508 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
CTDP1Q9Y5B0 LSR-214ENST00000621372 2274 ntAPPRIS P4 TSL 1 (best) BASIC21.97■■□□□ 1.11
CTDP1Q9Y5B0 LINC01547-202ENST00000397841 2303 ntTSL 2 BASIC21.97■■□□□ 1.11
CTDP1Q9Y5B0 LYNX1-204ENST00000614491 4708 ntAPPRIS P1 TSL 2 BASIC21.97■■□□□ 1.11
CTDP1Q9Y5B0 KREMEN2-206ENST00000575885 1798 ntTSL 2 BASIC21.97■■□□□ 1.11
CTDP1Q9Y5B0 GABRA2-214ENST00000515082 2366 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
CTDP1Q9Y5B0 RNF144A-201ENST00000320892 5743 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
CTDP1Q9Y5B0 SYTL1-210ENST00000616558 1878 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
CTDP1Q9Y5B0 DAG1-220ENST00000539901 5665 ntAPPRIS P1 TSL 5 BASIC21.97■■□□□ 1.11
CTDP1Q9Y5B0 CDK5R2-201ENST00000302625 2508 ntAPPRIS P1 BASIC21.97■■□□□ 1.11
CTDP1Q9Y5B0 ABCD1-202ENST00000370129 1016 ntTSL 2 BASIC21.97■■□□□ 1.11
CTDP1Q9Y5B0 CR769775.1-204ENST00000439760 747 ntTSL 5 BASIC21.97■■□□□ 1.11
CTDP1Q9Y5B0 AC009947.2-201ENST00000444014 672 ntBASIC21.97■■□□□ 1.11
CTDP1Q9Y5B0 AC019068.1-202ENST00000483218 768 ntTSL 3 BASIC21.97■■□□□ 1.11
CTDP1Q9Y5B0 AL132780.2-201ENST00000557615 1021 ntTSL 3 BASIC21.97■■□□□ 1.11
CTDP1Q9Y5B0 MTHFS-202ENST00000559722 948 ntTSL 2 BASIC21.97■■□□□ 1.11
CTDP1Q9Y5B0 CLN6-204ENST00000564752 900 ntTSL 3 BASIC21.97■■□□□ 1.11
CTDP1Q9Y5B0 AL441883.1-201ENST00000566170 1045 ntBASIC21.97■■□□□ 1.11
CTDP1Q9Y5B0 AC215522.2-202ENST00000633163 1143 ntTSL 5 BASIC21.97■■□□□ 1.11
CTDP1Q9Y5B0 C11orf49-201ENST00000278460 1645 ntAPPRIS P3 TSL 1 (best) BASIC21.97■■□□□ 1.11
CTDP1Q9Y5B0 RFC2-213ENST00000621097 1635 ntTSL 5 BASIC21.97■■□□□ 1.11
CTDP1Q9Y5B0 PLIN2-201ENST00000276914 1972 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
CTDP1Q9Y5B0 RAB11FIP4-201ENST00000394744 1968 ntTSL 2 BASIC21.97■■□□□ 1.11
CTDP1Q9Y5B0 GUCY1A3-210ENST00000513574 2656 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
CTDP1Q9Y5B0 KRT18-207ENST00000550600 1696 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
CTDP1Q9Y5B0 AC026412.3-201ENST00000605200 1661 ntTSL 5 BASIC21.97■■□□□ 1.11
CTDP1Q9Y5B0 TRIM3-202ENST00000359518 3042 ntAPPRIS P1 TSL 5 BASIC21.97■■□□□ 1.11
CTDP1Q9Y5B0 KCNK4-207ENST00000539216 1723 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
CTDP1Q9Y5B0 SUMF2-208ENST00000434526 2052 ntAPPRIS P3 TSL 1 (best) BASIC21.97■■□□□ 1.11
CTDP1Q9Y5B0 NYAP1-202ENST00000454988 2777 ntTSL 5 BASIC21.97■■□□□ 1.11
CTDP1Q9Y5B0 TDRP-202ENST00000427263 2465 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
CTDP1Q9Y5B0 SPATA6L-207ENST00000475086 1444 ntAPPRIS P1 TSL 2 BASIC21.97■■□□□ 1.11
CTDP1Q9Y5B0 PLA2R1-202ENST00000392771 5160 ntAPPRIS ALT2 TSL 1 (best) BASIC21.96■■□□□ 1.11
CTDP1Q9Y5B0 CEBPA-201ENST00000498907 2631 ntAPPRIS P1 BASIC21.96■■□□□ 1.11
CTDP1Q9Y5B0 LINC01521-201ENST00000504184 1943 ntBASIC21.96■■□□□ 1.11
CTDP1Q9Y5B0 PVRIG-201ENST00000317271 1583 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
CTDP1Q9Y5B0 UAP1-201ENST00000271469 2377 ntAPPRIS ALT1 TSL 5 BASIC21.96■■□□□ 1.11
CTDP1Q9Y5B0 TMEM70-201ENST00000312184 2018 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
CTDP1Q9Y5B0 GPR139-202ENST00000570682 1613 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
CTDP1Q9Y5B0 ZCCHC24-202ENST00000372336 4933 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
CTDP1Q9Y5B0 DNAJC1-202ENST00000376980 2106 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
CTDP1Q9Y5B0 EEF1D-202ENST00000395119 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC21.96■■□□□ 1.11
CTDP1Q9Y5B0 ZNF436-AS1-206ENST00000518821 461 ntTSL 2 BASIC21.96■■□□□ 1.11
CTDP1Q9Y5B0 CCNJL-205ENST00000519673 940 ntTSL 2 BASIC21.96■■□□□ 1.11
CTDP1Q9Y5B0 JOSD2-204ENST00000598418 996 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
CTDP1Q9Y5B0 AL358472.4-201ENST00000633140 710 ntBASIC21.96■■□□□ 1.11
CTDP1Q9Y5B0 TLE4-205ENST00000376544 4871 ntTSL 1 (best) BASIC21.96■■□□□ 1.11
CTDP1Q9Y5B0 AVL9-209ENST00000640103 1367 ntTSL 5 BASIC21.96■■□□□ 1.11
CTDP1Q9Y5B0 ACTL6A-201ENST00000392662 1899 ntTSL 2 BASIC21.96■■□□□ 1.11
CTDP1Q9Y5B0 UPF3A-202ENST00000375299 2387 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
CTDP1Q9Y5B0 CERKL-205ENST00000409440 2425 ntTSL 2 BASIC21.96■■□□□ 1.11
CTDP1Q9Y5B0 LPAR2-202ENST00000542587 2546 ntAPPRIS P1 TSL 2 BASIC21.96■■□□□ 1.11
CTDP1Q9Y5B0 CXorf40A-208ENST00000434353 1524 ntAPPRIS ALT1 TSL 5 BASIC21.96■■□□□ 1.11
CTDP1Q9Y5B0 AKNA-205ENST00000374079 2138 ntTSL 1 (best) BASIC21.95■■□□□ 1.11
CTDP1Q9Y5B0 KIAA0895-204ENST00000415803 2865 ntTSL 1 (best) BASIC21.95■■□□□ 1.1
CTDP1Q9Y5B0 TSG101-201ENST00000251968 1824 ntAPPRIS P1 TSL 1 (best) BASIC21.95■■□□□ 1.1
CTDP1Q9Y5B0 AL031133.1-201ENST00000406807 723 ntBASIC21.95■■□□□ 1.1
CTDP1Q9Y5B0 AC074183.1-201ENST00000439105 782 ntTSL 5 BASIC21.95■■□□□ 1.1
Retrieved 100 of 98,524 protein–RNA pairs in 25.4 ms