Protein–RNA interactions for Protein: Q9Y3I0

RTCB, tRNA-splicing ligase RtcB homolog, humanhuman

Known RBP Predictions only

Length 505 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTCBQ9Y3I0 PDLIM2-204ENST00000397760 1847 ntAPPRIS P1 TSL 1 (best) BASIC24.03■■□□□ 1.44
RTCBQ9Y3I0 ZNF655-203ENST00000357864 1370 ntTSL 2 BASIC24.03■■□□□ 1.44
RTCBQ9Y3I0 AKR1A1-214ENST00000621846 1360 ntAPPRIS P1 TSL 5 BASIC24.03■■□□□ 1.44
RTCBQ9Y3I0 SAXO1-202ENST00000380534 2099 ntAPPRIS P3 TSL 1 (best) BASIC24.03■■□□□ 1.44
RTCBQ9Y3I0 SPSB3-201ENST00000301717 1449 ntAPPRIS P1 TSL 1 (best) BASIC24.02■■□□□ 1.44
RTCBQ9Y3I0 UBXN6-201ENST00000301281 1943 ntAPPRIS P1 TSL 1 (best) BASIC24.02■■□□□ 1.44
RTCBQ9Y3I0 TANGO2-217ENST00000456048 2439 ntTSL 2 BASIC24.02■■□□□ 1.44
RTCBQ9Y3I0 AL391422.3-201ENST00000603791 2761 ntBASIC24.02■■□□□ 1.44
RTCBQ9Y3I0 CHRNA3-202ENST00000348639 2030 ntTSL 1 (best) BASIC24.02■■□□□ 1.44
RTCBQ9Y3I0 PHPT1-202ENST00000371661 985 ntTSL 5 BASIC24.02■■□□□ 1.44
RTCBQ9Y3I0 FAM239B-201ENST00000381106 1099 ntTSL 2 BASIC24.02■■□□□ 1.44
RTCBQ9Y3I0 TOB2P1-201ENST00000469761 992 ntBASIC24.02■■□□□ 1.44
RTCBQ9Y3I0 KRT18P31-201ENST00000506277 1292 ntBASIC24.02■■□□□ 1.44
RTCBQ9Y3I0 LAT-211ENST00000566177 786 ntAPPRIS ALT2 TSL 1 (best) BASIC24.02■■□□□ 1.44
RTCBQ9Y3I0 L34079.3-201ENST00000600242 546 ntTSL 4 BASIC24.02■■□□□ 1.44
RTCBQ9Y3I0 CLEC4G-201ENST00000328853 1360 ntAPPRIS P1 TSL 1 (best) BASIC24.02■■□□□ 1.44
RTCBQ9Y3I0 FKBP3-201ENST00000216330 1684 ntAPPRIS P1 TSL 1 (best) BASIC24.02■■□□□ 1.44
RTCBQ9Y3I0 TMEM109-202ENST00000536171 1959 ntAPPRIS P1 TSL 2 BASIC24.02■■□□□ 1.43
RTCBQ9Y3I0 SDHAP1-207ENST00000440850 2000 ntBASIC24.01■■□□□ 1.43
RTCBQ9Y3I0 PPP1R12C-201ENST00000263433 2924 ntAPPRIS P1 TSL 1 (best) BASIC24.01■■□□□ 1.43
RTCBQ9Y3I0 CRYZL1-203ENST00000381540 1482 ntTSL 2 BASIC24.01■■□□□ 1.43
RTCBQ9Y3I0 MRPL3-202ENST00000425847 1457 ntTSL 2 BASIC24.01■■□□□ 1.43
RTCBQ9Y3I0 ASPG-201ENST00000546892 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC24.01■■□□□ 1.43
RTCBQ9Y3I0 FBXO17-201ENST00000292852 2386 ntAPPRIS P1 TSL 1 (best) BASIC24.01■■□□□ 1.43
RTCBQ9Y3I0 GAS7-210ENST00000579158 1528 ntTSL 1 (best) BASIC24.01■■□□□ 1.43
RTCBQ9Y3I0 STK11-205ENST00000586243 2777 ntAPPRIS ALT2 TSL 5 BASIC24.01■■□□□ 1.43
RTCBQ9Y3I0 SPAG16-202ENST00000331683 2177 ntAPPRIS P1 TSL 1 (best) BASIC24.01■■□□□ 1.43
RTCBQ9Y3I0 B3GALNT2-201ENST00000313984 1874 ntTSL 1 (best) BASIC24.01■■□□□ 1.43
RTCBQ9Y3I0 RPP38-203ENST00000378202 1030 ntAPPRIS P1 TSL 1 (best) BASIC24.01■■□□□ 1.43
RTCBQ9Y3I0 ISG15-201ENST00000379389 711 ntAPPRIS P2 TSL 1 (best) BASIC24.01■■□□□ 1.43
RTCBQ9Y3I0 RPL36-202ENST00000394580 556 ntAPPRIS P1 TSL 1 (best) BASIC24.01■■□□□ 1.43
RTCBQ9Y3I0 AC093459.1-201ENST00000444567 481 ntTSL 3 BASIC24.01■■□□□ 1.43
RTCBQ9Y3I0 PRTN3-202ENST00000544537 1036 ntTSL 1 (best) BASIC24.01■■□□□ 1.43
RTCBQ9Y3I0 RPL19-204ENST00000579260 1051 ntAPPRIS ALT1 TSL 2 BASIC24.01■■□□□ 1.43
RTCBQ9Y3I0 ADORA1-208ENST00000618295 862 ntTSL 1 (best) BASIC24.01■■□□□ 1.43
RTCBQ9Y3I0 ASAH1-251ENST00000637561 929 ntTSL 2 BASIC24.01■■□□□ 1.43
RTCBQ9Y3I0 ETV4-204ENST00000545089 1628 ntTSL 2 BASIC24.01■■□□□ 1.43
RTCBQ9Y3I0 CENPT-215ENST00000564817 1638 ntAPPRIS ALT2 TSL 5 BASIC24.01■■□□□ 1.43
RTCBQ9Y3I0 CYP2D7-201ENST00000358097 1655 ntTSL 1 (best) BASIC24.01■■□□□ 1.43
RTCBQ9Y3I0 CHTOP-204ENST00000368694 2096 ntAPPRIS P3 TSL 1 (best) BASIC24.01■■□□□ 1.43
RTCBQ9Y3I0 TXNDC5-201ENST00000379757 2964 ntAPPRIS P1 TSL 1 (best) BASIC24■■□□□ 1.43
RTCBQ9Y3I0 HEXIM2-201ENST00000307275 1528 ntAPPRIS P1 TSL 2 BASIC24■■□□□ 1.43
RTCBQ9Y3I0 STEAP1B-201ENST00000404369 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC24■■□□□ 1.43
RTCBQ9Y3I0 FAM87B-201ENST00000326734 1947 ntTSL 2 BASIC24■■□□□ 1.43
RTCBQ9Y3I0 RAB5C-202ENST00000393860 1912 ntAPPRIS P1 TSL 1 (best) BASIC24■■□□□ 1.43
RTCBQ9Y3I0 SLC25A42-201ENST00000318596 3120 ntAPPRIS P1 TSL 1 (best) BASIC24■■□□□ 1.43
RTCBQ9Y3I0 GJA4-201ENST00000342280 1622 ntAPPRIS P1 TSL 1 (best) BASIC24■■□□□ 1.43
RTCBQ9Y3I0 TMEM42-201ENST00000302392 1026 ntAPPRIS P1 TSL 1 (best) BASIC24■■□□□ 1.43
RTCBQ9Y3I0 MAL-203ENST00000353004 873 ntTSL 1 (best) BASIC24■■□□□ 1.43
RTCBQ9Y3I0 CST3-202ENST00000398409 832 ntAPPRIS P1 TSL 3 BASIC24■■□□□ 1.43
RTCBQ9Y3I0 AKR7L-201ENST00000420396 1240 ntAPPRIS ALT2 TSL 5 BASIC24■■□□□ 1.43
RTCBQ9Y3I0 C10orf142-202ENST00000623589 1010 ntAPPRIS ALT2 TSL 5 BASIC24■■□□□ 1.43
RTCBQ9Y3I0 MAP2K3-215ENST00000627447 351 ntTSL 5 BASIC24■■□□□ 1.43
RTCBQ9Y3I0 CLN3-259ENST00000637551 1083 ntTSL 5 BASIC24■■□□□ 1.43
RTCBQ9Y3I0 PHF2-201ENST00000359246 5569 ntAPPRIS P1 TSL 1 (best) BASIC24■■□□□ 1.43
RTCBQ9Y3I0 FAM187A-202ENST00000412523 1748 ntTSL 1 (best) BASIC24■■□□□ 1.43
RTCBQ9Y3I0 PCCB-216ENST00000483687 1727 ntTSL 3 BASIC24■■□□□ 1.43
RTCBQ9Y3I0 EARS2-206ENST00000563232 1709 ntTSL 1 (best) BASIC24■■□□□ 1.43
RTCBQ9Y3I0 CYP1B1-207ENST00000614273 2174 ntAPPRIS P1 TSL 5 BASIC24■■□□□ 1.43
RTCBQ9Y3I0 CCDC130-201ENST00000221554 1792 ntAPPRIS P1 TSL 1 (best) BASIC24■■□□□ 1.43
RTCBQ9Y3I0 KREMEN2-206ENST00000575885 1798 ntTSL 2 BASIC24■■□□□ 1.43
RTCBQ9Y3I0 SLC22A17-202ENST00000354772 2238 ntAPPRIS ALT2 TSL 1 (best) BASIC24■■□□□ 1.43
RTCBQ9Y3I0 GOLGA6L5P-202ENST00000515341 1828 ntBASIC24■■□□□ 1.43
RTCBQ9Y3I0 TCP11-204ENST00000373979 1882 ntAPPRIS P3 TSL 5 BASIC24■■□□□ 1.43
RTCBQ9Y3I0 TTC7A-201ENST00000319190 5157 ntAPPRIS P1 TSL 2 BASIC23.99■■□□□ 1.43
RTCBQ9Y3I0 PHLPP1-201ENST00000262719 6390 ntAPPRIS P1 TSL 1 (best) BASIC23.99■■□□□ 1.43
RTCBQ9Y3I0 AL162377.1-201ENST00000618844 1793 ntBASIC23.99■■□□□ 1.43
RTCBQ9Y3I0 PRKAR2A-206ENST00000454963 1849 ntAPPRIS P1 TSL 2 BASIC23.99■■□□□ 1.43
RTCBQ9Y3I0 KCNAB2-205ENST00000378092 1202 ntAPPRIS ALT1 TSL 5 BASIC23.99■■□□□ 1.43
RTCBQ9Y3I0 ITM2C-204ENST00000409704 1106 ntTSL 5 BASIC23.99■■□□□ 1.43
RTCBQ9Y3I0 AC020909.1-201ENST00000599632 1265 ntAPPRIS P1 TSL 5 BASIC23.99■■□□□ 1.43
RTCBQ9Y3I0 CYP1B1-AS1-214ENST00000620177 554 ntTSL 4 BASIC23.99■■□□□ 1.43
RTCBQ9Y3I0 ANKRD36-207ENST00000639293 1168 ntAPPRIS ALT2 TSL 5 BASIC23.99■■□□□ 1.43
RTCBQ9Y3I0 EXOSC6-201ENST00000435634 5153 ntAPPRIS P1 BASIC23.99■■□□□ 1.43
RTCBQ9Y3I0 ANAPC4-201ENST00000315368 2685 ntAPPRIS P3 TSL 1 (best) BASIC23.99■■□□□ 1.43
RTCBQ9Y3I0 SEPT9-211ENST00000585930 1387 ntTSL 2 BASIC23.99■■□□□ 1.43
RTCBQ9Y3I0 TCF3-203ENST00000395423 2779 ntTSL 5 BASIC23.99■■□□□ 1.43
RTCBQ9Y3I0 AEBP2-204ENST00000398864 5099 ntAPPRIS P4 TSL 1 (best) BASIC23.99■■□□□ 1.43
RTCBQ9Y3I0 ACHE-203ENST00000411582 2179 ntTSL 1 (best) BASIC23.99■■□□□ 1.43
RTCBQ9Y3I0 APBB1IP-201ENST00000356785 1513 ntTSL 1 (best) BASIC23.99■■□□□ 1.43
RTCBQ9Y3I0 MRPL2-202ENST00000388752 1588 ntAPPRIS P1 TSL 1 (best) BASIC23.99■■□□□ 1.43
RTCBQ9Y3I0 DMPK-205ENST00000458663 2548 ntTSL 5 BASIC23.99■■□□□ 1.43
RTCBQ9Y3I0 TSG101-201ENST00000251968 1824 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
RTCBQ9Y3I0 SPHK1-207ENST00000590959 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC23.98■■□□□ 1.43
RTCBQ9Y3I0 TFEB-211ENST00000420312 1996 ntTSL 5 BASIC23.98■■□□□ 1.43
RTCBQ9Y3I0 DMKN-215ENST00000451297 1111 ntAPPRIS ALT2 TSL 1 (best) BASIC23.98■■□□□ 1.43
RTCBQ9Y3I0 AC008825.1-201ENST00000504398 452 ntTSL 3 BASIC23.98■■□□□ 1.43
RTCBQ9Y3I0 AC106795.1-205ENST00000512851 1056 ntBASIC23.98■■□□□ 1.43
RTCBQ9Y3I0 AP002469.2-201ENST00000531724 424 ntBASIC23.98■■□□□ 1.43
RTCBQ9Y3I0 BRICD5-203ENST00000566018 555 ntTSL 2 BASIC23.98■■□□□ 1.43
RTCBQ9Y3I0 SRSF1-209ENST00000585096 568 ntTSL 4 BASIC23.98■■□□□ 1.43
RTCBQ9Y3I0 SPINK2-205ENST00000616980 677 ntTSL 5 BASIC23.98■■□□□ 1.43
RTCBQ9Y3I0 IZUMO4-213ENST00000620263 947 ntTSL 3 BASIC23.98■■□□□ 1.43
RTCBQ9Y3I0 RPL7-202ENST00000396465 1308 ntTSL 3 BASIC23.98■■□□□ 1.43
RTCBQ9Y3I0 LINC00960-201ENST00000463183 1333 ntTSL 1 (best) BASIC23.98■■□□□ 1.43
RTCBQ9Y3I0 AGPAT2-201ENST00000371694 1391 ntTSL 1 (best) BASIC23.98■■□□□ 1.43
RTCBQ9Y3I0 GAS2L1P1-201ENST00000420145 1480 ntBASIC23.98■■□□□ 1.43
RTCBQ9Y3I0 UBE2E1-201ENST00000306627 1511 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
RTCBQ9Y3I0 OGG1-201ENST00000302003 1655 ntAPPRIS P4 TSL 1 (best) BASIC23.98■■□□□ 1.43
RTCBQ9Y3I0 ACOT2-201ENST00000238651 1774 ntTSL 1 (best) BASIC23.98■■□□□ 1.43
Retrieved 100 of 98,524 protein–RNA pairs in 24.7 ms