Protein–RNA interactions for Protein: Q9Y2Q9

MRPS28, 28S ribosomal protein S28, mitochondrial, humanhuman

Known RBP Predictions only

Length 187 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MRPS28Q9Y2Q9 PPP1R18-201ENST00000274853 4599 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
MRPS28Q9Y2Q9 PPP1R18-205ENST00000615527 4597 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
MRPS28Q9Y2Q9 CLEC10A-201ENST00000254868 1797 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
MRPS28Q9Y2Q9 SIGLEC10-204ENST00000436984 1776 ntTSL 2 BASIC16.41■□□□□ 0.22
MRPS28Q9Y2Q9 SNRPN-207ENST00000554227 1763 ntTSL 5 BASIC16.41■□□□□ 0.22
MRPS28Q9Y2Q9 KREMEN2-206ENST00000575885 1798 ntTSL 2 BASIC16.41■□□□□ 0.22
MRPS28Q9Y2Q9 ZNF692-204ENST00000451251 2065 ntAPPRIS ALT2 TSL 2 BASIC16.41■□□□□ 0.22
MRPS28Q9Y2Q9 CLASRP-201ENST00000221455 2234 ntAPPRIS P2 TSL 1 (best) BASIC16.41■□□□□ 0.22
MRPS28Q9Y2Q9 ZNF302-206ENST00000505242 2849 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
MRPS28Q9Y2Q9 RAB4A-201ENST00000366690 2966 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
MRPS28Q9Y2Q9 SEPHS1-206ENST00000545675 2988 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
MRPS28Q9Y2Q9 CNTNAP3-204ENST00000377656 4986 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
MRPS28Q9Y2Q9 MAN1B1-207ENST00000535144 2296 ntTSL 2 BASIC16.4■□□□□ 0.22
MRPS28Q9Y2Q9 ARID3A-201ENST00000263620 5941 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
MRPS28Q9Y2Q9 GHDC-212ENST00000593209 1827 ntTSL 5 BASIC16.4■□□□□ 0.22
MRPS28Q9Y2Q9 RBFOX1-204ENST00000422070 1684 ntTSL 2 BASIC16.4■□□□□ 0.22
MRPS28Q9Y2Q9 WWOX-205ENST00000539474 1670 ntTSL 5 BASIC16.4■□□□□ 0.22
MRPS28Q9Y2Q9 HSPB2-C11orf52-202ENST00000534100 1521 ntAPPRIS ALT2 TSL 2 BASIC16.4■□□□□ 0.22
MRPS28Q9Y2Q9 SKIDA1-202ENST00000449193 6598 ntAPPRIS P2 TSL 3 BASIC16.4■□□□□ 0.22
MRPS28Q9Y2Q9 NUDT10-202ENST00000376006 2001 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
MRPS28Q9Y2Q9 CCNJ-202ENST00000403870 2830 ntTSL 5 BASIC16.4■□□□□ 0.22
MRPS28Q9Y2Q9 ZNF274-212ENST00000617501 2538 ntAPPRIS P4 TSL 1 (best) BASIC16.4■□□□□ 0.22
MRPS28Q9Y2Q9 CAV3-201ENST00000343849 1431 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
MRPS28Q9Y2Q9 TMEM41B-207ENST00000611268 1440 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
MRPS28Q9Y2Q9 EGFR-202ENST00000342916 2239 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
MRPS28Q9Y2Q9 NDUFB1-201ENST00000329559 528 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
MRPS28Q9Y2Q9 SLC29A4P1-201ENST00000398760 971 ntBASIC16.4■□□□□ 0.22
MRPS28Q9Y2Q9 GATS-209ENST00000454084 1030 ntTSL 3 BASIC16.4■□□□□ 0.22
MRPS28Q9Y2Q9 C11orf24-209ENST00000533310 980 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
MRPS28Q9Y2Q9 IGFBP3-211ENST00000615754 792 ntTSL 5 BASIC16.4■□□□□ 0.22
MRPS28Q9Y2Q9 PTMS-207ENST00000619580 1150 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
MRPS28Q9Y2Q9 HLA-B-256ENST00000639848 1089 ntBASIC16.4■□□□□ 0.22
MRPS28Q9Y2Q9 NPTX2-201ENST00000265634 2700 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
MRPS28Q9Y2Q9 SPTBN4-204ENST00000392025 8671 ntAPPRIS ALT1 TSL 5 BASIC16.4■□□□□ 0.22
MRPS28Q9Y2Q9 NADK-201ENST00000341426 3235 ntAPPRIS P3 TSL 2 BASIC16.4■□□□□ 0.22
MRPS28Q9Y2Q9 EPOR-201ENST00000222139 2411 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
MRPS28Q9Y2Q9 LMF1-212ENST00000568897 1603 ntTSL 5 BASIC16.4■□□□□ 0.22
MRPS28Q9Y2Q9 BSG-201ENST00000333511 1974 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
MRPS28Q9Y2Q9 LRRC29-209ENST00000629962 1303 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
MRPS28Q9Y2Q9 C19orf25-203ENST00000585675 1837 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
MRPS28Q9Y2Q9 AL390961.4-201ENST00000623958 2535 ntBASIC16.4■□□□□ 0.22
MRPS28Q9Y2Q9 NFE2-204ENST00000553070 1523 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
MRPS28Q9Y2Q9 SLC35E4-201ENST00000343605 2714 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.22
MRPS28Q9Y2Q9 PLA2G7-201ENST00000274793 1882 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.22
MRPS28Q9Y2Q9 ASIC3-202ENST00000349064 1895 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.22
MRPS28Q9Y2Q9 AC135050.7-201ENST00000624508 2218 ntBASIC16.39■□□□□ 0.22
MRPS28Q9Y2Q9 RRS1-201ENST00000320270 1706 ntAPPRIS P1 BASIC16.39■□□□□ 0.21
MRPS28Q9Y2Q9 ZNF470-201ENST00000330619 7151 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
MRPS28Q9Y2Q9 IFRD2-204ENST00000436390 2275 ntAPPRIS P1 TSL 2 BASIC16.39■□□□□ 0.21
MRPS28Q9Y2Q9 NPEPL1-203ENST00000525817 1780 ntTSL 2 BASIC16.39■□□□□ 0.21
MRPS28Q9Y2Q9 ATG101-201ENST00000336854 1439 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
MRPS28Q9Y2Q9 DBNL-207ENST00000440166 1415 ntTSL 2 BASIC16.39■□□□□ 0.21
MRPS28Q9Y2Q9 ANKS3-201ENST00000304283 2662 ntAPPRIS P1 TSL 2 BASIC16.39■□□□□ 0.21
MRPS28Q9Y2Q9 CLSTN1-202ENST00000377298 5221 ntAPPRIS ALT2 TSL 1 (best) BASIC16.39■□□□□ 0.21
MRPS28Q9Y2Q9 MED10-201ENST00000255764 1141 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
MRPS28Q9Y2Q9 COA6-202ENST00000366613 641 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
MRPS28Q9Y2Q9 MAP1LC3A-203ENST00000397709 698 ntAPPRIS P1 TSL 3 BASIC16.39■□□□□ 0.21
MRPS28Q9Y2Q9 HAGLROS-201ENST00000426615 1121 ntTSL 2 BASIC16.39■□□□□ 0.21
MRPS28Q9Y2Q9 AL161908.1-201ENST00000451449 449 ntTSL 2 BASIC16.39■□□□□ 0.21
MRPS28Q9Y2Q9 SCO2-203ENST00000535425 1002 ntAPPRIS P1 TSL 2 BASIC16.39■□□□□ 0.21
MRPS28Q9Y2Q9 VPS53-216ENST00000574029 585 ntTSL 4 BASIC16.39■□□□□ 0.21
MRPS28Q9Y2Q9 AGER-207ENST00000375076 1492 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
MRPS28Q9Y2Q9 UBR3-203ENST00000418381 7951 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
MRPS28Q9Y2Q9 PSPC1-201ENST00000338910 2407 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
MRPS28Q9Y2Q9 GATAD1-201ENST00000287957 3361 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
MRPS28Q9Y2Q9 SCARF1-202ENST00000348987 2619 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
MRPS28Q9Y2Q9 KLHL14-201ENST00000358095 1884 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
MRPS28Q9Y2Q9 MAPK8IP3-201ENST00000250894 5661 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
MRPS28Q9Y2Q9 HOXD11-201ENST00000249504 1533 ntAPPRIS P1 TSL 3 BASIC16.39■□□□□ 0.21
MRPS28Q9Y2Q9 PLCG1-201ENST00000244007 5285 ntAPPRIS P4 TSL 5 BASIC16.39■□□□□ 0.21
MRPS28Q9Y2Q9 TAF4B-201ENST00000269142 5260 ntAPPRIS P3 TSL 1 (best) BASIC16.39■□□□□ 0.21
MRPS28Q9Y2Q9 FBXO27-207ENST00000600828 1557 ntAPPRIS ALT1 TSL 5 BASIC16.38■□□□□ 0.21
MRPS28Q9Y2Q9 PDE1C-206ENST00000396193 5109 ntAPPRIS P4 TSL 2 BASIC16.38■□□□□ 0.21
MRPS28Q9Y2Q9 AIRE-201ENST00000291582 2257 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
MRPS28Q9Y2Q9 CYR61-201ENST00000451137 2290 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
MRPS28Q9Y2Q9 CHD1L-204ENST00000431239 2907 ntTSL 5 BASIC16.38■□□□□ 0.21
MRPS28Q9Y2Q9 HRASLS-201ENST00000264735 1066 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
MRPS28Q9Y2Q9 HCFC1R1-202ENST00000354679 765 ntTSL 2 BASIC16.38■□□□□ 0.21
MRPS28Q9Y2Q9 HES2-203ENST00000377837 1222 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
MRPS28Q9Y2Q9 AL391244.2-201ENST00000428932 543 ntTSL 2 BASIC16.38■□□□□ 0.21
MRPS28Q9Y2Q9 AL807752.2-201ENST00000435463 301 ntTSL 3 BASIC16.38■□□□□ 0.21
MRPS28Q9Y2Q9 RHEB-204ENST00000472642 900 ntTSL 3 BASIC16.38■□□□□ 0.21
MRPS28Q9Y2Q9 AC097658.1-201ENST00000475555 843 ntBASIC16.38■□□□□ 0.21
MRPS28Q9Y2Q9 PNMA6B-201ENST00000538162 1200 ntBASIC16.38■□□□□ 0.21
MRPS28Q9Y2Q9 CAMTA1-216ENST00000557126 486 ntTSL 2 BASIC16.38■□□□□ 0.21
MRPS28Q9Y2Q9 CIRBP-213ENST00000587323 1092 ntTSL 5 BASIC16.38■□□□□ 0.21
MRPS28Q9Y2Q9 AC007786.1-201ENST00000587859 709 ntTSL 2 BASIC16.38■□□□□ 0.21
MRPS28Q9Y2Q9 TNNI3-207ENST00000588882 669 ntTSL 2 BASIC16.38■□□□□ 0.21
MRPS28Q9Y2Q9 ASCC2-202ENST00000397771 2823 ntAPPRIS P1 TSL 5 BASIC16.38■□□□□ 0.21
MRPS28Q9Y2Q9 MYC-205ENST00000524013 2150 ntAPPRIS ALT1 TSL 1 (best) BASIC16.38■□□□□ 0.21
MRPS28Q9Y2Q9 TMEM175-220ENST00000515740 1514 ntTSL 3 BASIC16.38■□□□□ 0.21
MRPS28Q9Y2Q9 SNN-201ENST00000329565 3312 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
MRPS28Q9Y2Q9 PRR5-201ENST00000006251 1767 ntTSL 2 BASIC16.38■□□□□ 0.21
MRPS28Q9Y2Q9 ZNF446-203ENST00000594369 2238 ntAPPRIS P2 TSL 1 (best) BASIC16.38■□□□□ 0.21
MRPS28Q9Y2Q9 SMC5-AS1-201ENST00000594708 1818 ntTSL 2 BASIC16.38■□□□□ 0.21
MRPS28Q9Y2Q9 APLP2-210ENST00000528499 2530 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
MRPS28Q9Y2Q9 ADAM33-203ENST00000379861 3674 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
MRPS28Q9Y2Q9 RBPJL-203ENST00000372743 1623 ntAPPRIS ALT1 TSL 1 (best) BASIC16.37■□□□□ 0.21
MRPS28Q9Y2Q9 TIMP4-201ENST00000287814 1650 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
MRPS28Q9Y2Q9 ISLR2-201ENST00000361742 4817 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 23.9 ms