Protein–RNA interactions for Protein: Q9Y2J0

RPH3A, Rabphilin-3A, humanhuman

Predicted RBP Predictions only

Length 694 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPH3AQ9Y2J0 ANKRD54-211ENST00000609454 825 ntTSL 3 BASIC17.46■□□□□ 0.39
RPH3AQ9Y2J0 KAZN-209ENST00000636564 1197 ntTSL 5 BASIC17.46■□□□□ 0.39
RPH3AQ9Y2J0 FAM83E-201ENST00000263266 1926 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
RPH3AQ9Y2J0 CDH5-204ENST00000563425 1932 ntTSL 5 BASIC17.46■□□□□ 0.39
RPH3AQ9Y2J0 PHLDB3-201ENST00000292140 2591 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.39
RPH3AQ9Y2J0 NAT16-201ENST00000300303 2935 ntAPPRIS P2 TSL 2 BASIC17.46■□□□□ 0.39
RPH3AQ9Y2J0 AC093484.2-201ENST00000580996 2166 ntBASIC17.46■□□□□ 0.39
RPH3AQ9Y2J0 ACD-201ENST00000219251 2052 ntAPPRIS P3 TSL 2 BASIC17.46■□□□□ 0.39
RPH3AQ9Y2J0 TDRP-203ENST00000523656 2622 ntTSL 5 BASIC17.46■□□□□ 0.39
RPH3AQ9Y2J0 PTPA-204ENST00000355007 2515 ntTSL 5 BASIC17.46■□□□□ 0.38
RPH3AQ9Y2J0 HCK-207ENST00000520553 2101 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
RPH3AQ9Y2J0 CTBP2-205ENST00000411419 2036 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
RPH3AQ9Y2J0 SLC16A5-206ENST00000580123 2019 ntAPPRIS P2 TSL 2 BASIC17.45■□□□□ 0.38
RPH3AQ9Y2J0 BEST2-201ENST00000042931 1908 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
RPH3AQ9Y2J0 ASPM-201ENST00000294732 6132 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
RPH3AQ9Y2J0 AC079598.2-202ENST00000546624 1451 ntBASIC17.45■□□□□ 0.38
RPH3AQ9Y2J0 SHANK1-202ENST00000359082 6459 ntTSL 5 BASIC17.45■□□□□ 0.38
RPH3AQ9Y2J0 ELMOD1-206ENST00000531234 1832 ntTSL 2 BASIC17.45■□□□□ 0.38
RPH3AQ9Y2J0 PMEPA1-202ENST00000341744 4845 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
RPH3AQ9Y2J0 HTR1E-201ENST00000305344 2052 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
RPH3AQ9Y2J0 LAPTM4B-204ENST00000619747 2758 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
RPH3AQ9Y2J0 HLA-DRB1-201ENST00000360004 1229 ntAPPRIS P1 BASIC17.45■□□□□ 0.38
RPH3AQ9Y2J0 BEX3-204ENST00000372645 913 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
RPH3AQ9Y2J0 MIR1238-201ENST00000408483 83 ntBASIC17.45■□□□□ 0.38
RPH3AQ9Y2J0 HYAL3-203ENST00000415204 959 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
RPH3AQ9Y2J0 AP003501.2-201ENST00000524433 477 ntTSL 4 BASIC17.45■□□□□ 0.38
RPH3AQ9Y2J0 FAU-207ENST00000529639 847 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
RPH3AQ9Y2J0 AL359399.1-201ENST00000557610 462 ntTSL 3 BASIC17.45■□□□□ 0.38
RPH3AQ9Y2J0 TRAPPC6A-201ENST00000006275 805 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
RPH3AQ9Y2J0 CROCCP2-205ENST00000639481 1296 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
RPH3AQ9Y2J0 NKX2-1-202ENST00000498187 2338 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
RPH3AQ9Y2J0 NUTM2D-201ENST00000381697 3290 ntAPPRIS P5 TSL 1 (best) BASIC17.45■□□□□ 0.38
RPH3AQ9Y2J0 TOM1L1-202ENST00000445275 2228 ntTSL 2 BASIC17.45■□□□□ 0.38
RPH3AQ9Y2J0 BLACE-201ENST00000378120 2456 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
RPH3AQ9Y2J0 TMEM234-203ENST00000373593 1411 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
RPH3AQ9Y2J0 RALGAPA1-219ENST00000637992 8512 ntTSL 5 BASIC17.45■□□□□ 0.38
RPH3AQ9Y2J0 CYP21A2-222ENST00000435122 1914 ntTSL 2 BASIC17.45■□□□□ 0.38
RPH3AQ9Y2J0 KLRG2-201ENST00000340940 2197 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
RPH3AQ9Y2J0 FN3KRP-201ENST00000269373 1849 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
RPH3AQ9Y2J0 MUTYH-203ENST00000372098 1839 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
RPH3AQ9Y2J0 MUTYH-204ENST00000372104 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
RPH3AQ9Y2J0 MUTYH-205ENST00000372110 1809 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
RPH3AQ9Y2J0 SPON2-203ENST00000431380 1802 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
RPH3AQ9Y2J0 AC005906.2-203ENST00000640962 2091 ntTSL 5 BASIC17.44■□□□□ 0.38
RPH3AQ9Y2J0 ASNS-206ENST00000437628 1638 ntTSL 2 BASIC17.44■□□□□ 0.38
RPH3AQ9Y2J0 ZNF398-202ENST00000475153 2860 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
RPH3AQ9Y2J0 AC116562.4-201ENST00000641316 2276 ntBASIC17.44■□□□□ 0.38
RPH3AQ9Y2J0 BCL2-202ENST00000398117 7461 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
RPH3AQ9Y2J0 TMEM235-203ENST00000550981 1786 ntTSL 2 BASIC17.44■□□□□ 0.38
RPH3AQ9Y2J0 HOXC4-201ENST00000303406 1524 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
RPH3AQ9Y2J0 UBE2E1-201ENST00000306627 1511 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
RPH3AQ9Y2J0 SLC25A41-201ENST00000321510 1532 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
RPH3AQ9Y2J0 HCRT-201ENST00000293330 577 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
RPH3AQ9Y2J0 AL390955.1-201ENST00000428694 934 ntBASIC17.44■□□□□ 0.38
RPH3AQ9Y2J0 AC008040.2-201ENST00000461049 708 ntBASIC17.44■□□□□ 0.38
RPH3AQ9Y2J0 AC091390.4-202ENST00000476426 537 ntBASIC17.44■□□□□ 0.38
RPH3AQ9Y2J0 ASPHD1-203ENST00000483405 1115 ntAPPRIS ALT2 TSL 3 BASIC17.44■□□□□ 0.38
RPH3AQ9Y2J0 CHAC1-203ENST00000487220 853 ntTSL 3 BASIC17.44■□□□□ 0.38
RPH3AQ9Y2J0 AC136628.4-201ENST00000520758 535 ntTSL 2 BASIC17.44■□□□□ 0.38
RPH3AQ9Y2J0 CIRBP-217ENST00000588230 1013 ntTSL 5 BASIC17.44■□□□□ 0.38
RPH3AQ9Y2J0 AC008649.1-201ENST00000589557 516 ntTSL 2 BASIC17.44■□□□□ 0.38
RPH3AQ9Y2J0 KANK3-205ENST00000610351 1191 ntTSL 5 BASIC17.44■□□□□ 0.38
RPH3AQ9Y2J0 NOP56-201ENST00000329276 2400 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
RPH3AQ9Y2J0 DUT-202ENST00000455976 1935 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
RPH3AQ9Y2J0 MED25-201ENST00000312865 2332 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
RPH3AQ9Y2J0 ARHGAP35-201ENST00000404338 8889 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
RPH3AQ9Y2J0 AC008691.1-203ENST00000515337 1580 ntTSL 2 BASIC17.44■□□□□ 0.38
RPH3AQ9Y2J0 HCN4-201ENST00000261917 7228 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
RPH3AQ9Y2J0 ZNF324B-202ENST00000545523 2368 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
RPH3AQ9Y2J0 RPS6KB2-201ENST00000312629 1733 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
RPH3AQ9Y2J0 TP73-202ENST00000354437 2140 ntTSL 5 BASIC17.44■□□□□ 0.38
RPH3AQ9Y2J0 SLC34A3-201ENST00000361134 2124 ntAPPRIS P1 TSL 2 BASIC17.44■□□□□ 0.38
RPH3AQ9Y2J0 PIGQ-209ENST00000470411 2112 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
RPH3AQ9Y2J0 SPHK1-207ENST00000590959 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
RPH3AQ9Y2J0 AL138752.2-201ENST00000540557 2591 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
RPH3AQ9Y2J0 MAN1A1-201ENST00000368468 5014 ntAPPRIS P1 TSL 2 BASIC17.43■□□□□ 0.38
RPH3AQ9Y2J0 MAP4K4-205ENST00000350878 7640 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
RPH3AQ9Y2J0 CHRNA4-207ENST00000615287 5643 ntTSL 5 BASIC17.43■□□□□ 0.38
RPH3AQ9Y2J0 EDA-208ENST00000524573 1381 ntAPPRIS ALT1 TSL 1 (best) BASIC17.43■□□□□ 0.38
RPH3AQ9Y2J0 CDH23-212ENST00000616684 4814 ntTSL 5 BASIC17.43■□□□□ 0.38
RPH3AQ9Y2J0 IMMP2L-202ENST00000405709 1522 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
RPH3AQ9Y2J0 TMTC1-203ENST00000539277 2758 ntAPPRIS P2 TSL 1 (best) BASIC17.43■□□□□ 0.38
RPH3AQ9Y2J0 AC126773.2-201ENST00000562172 1682 ntTSL 3 BASIC17.43■□□□□ 0.38
RPH3AQ9Y2J0 SYNE4-202ENST00000340477 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC17.43■□□□□ 0.38
RPH3AQ9Y2J0 FAM207BP-201ENST00000447172 505 ntBASIC17.43■□□□□ 0.38
RPH3AQ9Y2J0 AL445645.1-201ENST00000451318 1019 ntTSL 2 BASIC17.43■□□□□ 0.38
RPH3AQ9Y2J0 CHCHD10-202ENST00000484558 1171 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
RPH3AQ9Y2J0 OAF-202ENST00000531220 815 ntAPPRIS ALT2 TSL 3 BASIC17.43■□□□□ 0.38
RPH3AQ9Y2J0 CBLN1-202ENST00000536749 718 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
RPH3AQ9Y2J0 YPEL3-207ENST00000566134 761 ntTSL 5 BASIC17.43■□□□□ 0.38
RPH3AQ9Y2J0 SLC25A1P4-201ENST00000567977 778 ntBASIC17.43■□□□□ 0.38
RPH3AQ9Y2J0 KANSL1-AS1-203ENST00000572973 424 ntTSL 3 BASIC17.43■□□□□ 0.38
RPH3AQ9Y2J0 ZNF667-AS1-206ENST00000591797 535 ntTSL 5 BASIC17.43■□□□□ 0.38
RPH3AQ9Y2J0 FXYD3-214ENST00000605677 633 ntTSL 2 BASIC17.43■□□□□ 0.38
RPH3AQ9Y2J0 AC130371.2-201ENST00000619443 611 ntBASIC17.43■□□□□ 0.38
RPH3AQ9Y2J0 CHST2-201ENST00000309575 4582 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
RPH3AQ9Y2J0 AP3S1-201ENST00000316788 1730 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
RPH3AQ9Y2J0 GABRD-205ENST00000638771 1707 ntAPPRIS ALT2 TSL 3 BASIC17.43■□□□□ 0.38
RPH3AQ9Y2J0 PRKAG2-203ENST00000418337 2318 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
RPH3AQ9Y2J0 KBTBD11-201ENST00000320248 6710 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 52.6 ms