Protein–RNA interactions for Protein: Q9Y2D8

SSX2IP, Afadin- and alpha-actinin-binding protein, humanhuman

Predictions only

Length 614 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSX2IPQ9Y2D8 ABCD1-202ENST00000370129 1016 ntTSL 2 BASIC20.45■□□□□ 0.86
SSX2IPQ9Y2D8 PTGDS-202ENST00000371625 807 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
SSX2IPQ9Y2D8 ISCU-202ENST00000392807 1069 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
SSX2IPQ9Y2D8 AC012618.3-203ENST00000426044 917 ntTSL 2 BASIC20.45■□□□□ 0.86
SSX2IPQ9Y2D8 ISCU-203ENST00000431221 799 ntTSL 2 BASIC20.45■□□□□ 0.86
SSX2IPQ9Y2D8 AP003041.3-201ENST00000527151 707 ntBASIC20.45■□□□□ 0.86
SSX2IPQ9Y2D8 AC079385.1-202ENST00000549203 569 ntTSL 4 BASIC20.45■□□□□ 0.86
SSX2IPQ9Y2D8 AL121956.5-201ENST00000625261 221 ntBASIC20.45■□□□□ 0.86
SSX2IPQ9Y2D8 FBXL22-204ENST00000638704 729 ntAPPRIS ALT2 TSL 2 BASIC20.45■□□□□ 0.86
SSX2IPQ9Y2D8 SPON2-201ENST00000290902 1869 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
SSX2IPQ9Y2D8 FDXR-201ENST00000293195 1875 ntAPPRIS ALT1 TSL 1 (best) BASIC20.45■□□□□ 0.86
SSX2IPQ9Y2D8 GTPBP3-222ENST00000600625 2493 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
SSX2IPQ9Y2D8 EPS8L1-201ENST00000201647 2536 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
SSX2IPQ9Y2D8 CFP-201ENST00000247153 1713 ntAPPRIS P2 TSL 5 BASIC20.44■□□□□ 0.86
SSX2IPQ9Y2D8 ABHD14A-ACY1-202ENST00000463937 1705 ntAPPRIS ALT2 TSL 5 BASIC20.44■□□□□ 0.86
SSX2IPQ9Y2D8 SIMC1-203ENST00000429602 2694 ntAPPRIS ALT2 TSL 1 (best) BASIC20.44■□□□□ 0.86
SSX2IPQ9Y2D8 TXNDC5-201ENST00000379757 2964 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
SSX2IPQ9Y2D8 PQLC2-202ENST00000375155 1805 ntAPPRIS P1 TSL 2 BASIC20.44■□□□□ 0.86
SSX2IPQ9Y2D8 ACVR1B-201ENST00000257963 4563 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
SSX2IPQ9Y2D8 C12orf42-205ENST00000548048 1532 ntAPPRIS ALT2 TSL 5 BASIC20.44■□□□□ 0.86
SSX2IPQ9Y2D8 ADAMTS19-201ENST00000274487 5234 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
SSX2IPQ9Y2D8 RHNO1-204ENST00000489288 1870 ntAPPRIS P3 TSL 1 (best) BASIC20.44■□□□□ 0.86
SSX2IPQ9Y2D8 AC093627.4-201ENST00000484550 5008 ntTSL 2 BASIC20.44■□□□□ 0.86
SSX2IPQ9Y2D8 FGF8-202ENST00000344255 707 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
SSX2IPQ9Y2D8 YPEL3-201ENST00000398838 935 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
SSX2IPQ9Y2D8 AC114763.1-202ENST00000414911 867 ntTSL 3 BASIC20.44■□□□□ 0.86
SSX2IPQ9Y2D8 HIGD1A-204ENST00000452906 585 ntTSL 2 BASIC20.44■□□□□ 0.86
SSX2IPQ9Y2D8 FAM53C-211ENST00000513056 923 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
SSX2IPQ9Y2D8 AP006284.1-202ENST00000527113 527 ntTSL 4 BASIC20.44■□□□□ 0.86
SSX2IPQ9Y2D8 GCHFR-202ENST00000558467 785 ntTSL 2 BASIC20.44■□□□□ 0.86
SSX2IPQ9Y2D8 YIPF2-209ENST00000590329 958 ntTSL 5 BASIC20.44■□□□□ 0.86
SSX2IPQ9Y2D8 AP000550.4-202ENST00000639755 178 ntBASIC20.44■□□□□ 0.86
SSX2IPQ9Y2D8 FAM43B-201ENST00000332947 2572 ntAPPRIS P1 BASIC20.44■□□□□ 0.86
SSX2IPQ9Y2D8 KRTAP5-AS1-201ENST00000424148 2265 ntTSL 2 BASIC20.44■□□□□ 0.86
SSX2IPQ9Y2D8 DET1-207ENST00000564406 2315 ntTSL 2 BASIC20.44■□□□□ 0.86
SSX2IPQ9Y2D8 TSPAN15-201ENST00000373290 1698 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
SSX2IPQ9Y2D8 LGALS9-202ENST00000313648 1378 ntTSL 3 BASIC20.44■□□□□ 0.86
SSX2IPQ9Y2D8 PLEKHG5-206ENST00000377748 5221 ntAPPRIS ALT2 TSL 2 BASIC20.44■□□□□ 0.86
SSX2IPQ9Y2D8 CRTAC1-203ENST00000370597 2890 ntTSL 1 (best) BASIC20.44■□□□□ 0.86
SSX2IPQ9Y2D8 NPLOC4-201ENST00000331134 4415 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
SSX2IPQ9Y2D8 PAOX-201ENST00000278060 1858 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
SSX2IPQ9Y2D8 FAM66B-202ENST00000606573 2630 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
SSX2IPQ9Y2D8 GABARAPL3-202ENST00000624044 1851 ntBASIC20.43■□□□□ 0.86
SSX2IPQ9Y2D8 SLC7A10-201ENST00000253188 1946 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
SSX2IPQ9Y2D8 LINC01465-201ENST00000408887 1940 ntBASIC20.43■□□□□ 0.86
SSX2IPQ9Y2D8 ISLR2-202ENST00000419208 2306 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
SSX2IPQ9Y2D8 FBXO27-207ENST00000600828 1557 ntAPPRIS ALT1 TSL 5 BASIC20.43■□□□□ 0.86
SSX2IPQ9Y2D8 AC011511.1-201ENST00000452032 1956 ntAPPRIS P1 TSL 2 BASIC20.43■□□□□ 0.86
SSX2IPQ9Y2D8 CERS6-201ENST00000305747 7217 ntAPPRIS P3 TSL 2 BASIC20.43■□□□□ 0.86
SSX2IPQ9Y2D8 AL158151.1-201ENST00000372490 2047 ntTSL 2 BASIC20.43■□□□□ 0.86
SSX2IPQ9Y2D8 NME1-202ENST00000336097 986 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
SSX2IPQ9Y2D8 GUCA2B-201ENST00000372581 597 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
SSX2IPQ9Y2D8 SPSB1-203ENST00000377399 1007 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
SSX2IPQ9Y2D8 DDRGK1-202ENST00000380201 1128 ntTSL 2 BASIC20.43■□□□□ 0.86
SSX2IPQ9Y2D8 NME1-203ENST00000393196 940 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
SSX2IPQ9Y2D8 MALL-203ENST00000427178 1070 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
SSX2IPQ9Y2D8 AC004540.1-201ENST00000439120 891 ntTSL 2 BASIC20.43■□□□□ 0.86
SSX2IPQ9Y2D8 AC104596.1-202ENST00000507486 759 ntTSL 3 BASIC20.43■□□□□ 0.86
SSX2IPQ9Y2D8 mascRNA-menRNA.2-201ENST00000616984 58 ntBASIC20.43■□□□□ 0.86
SSX2IPQ9Y2D8 SPINK2-207ENST00000631082 392 ntTSL 5 BASIC20.43■□□□□ 0.86
SSX2IPQ9Y2D8 HMGA1-205ENST00000447654 2159 ntAPPRIS P4 TSL 1 (best) BASIC20.43■□□□□ 0.86
SSX2IPQ9Y2D8 SLC29A4-202ENST00000396872 5685 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
SSX2IPQ9Y2D8 PDIA5-201ENST00000316218 1799 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
SSX2IPQ9Y2D8 SELENOF-207ENST00000611507 1785 ntTSL 5 BASIC20.43■□□□□ 0.86
SSX2IPQ9Y2D8 ACBD4-201ENST00000321854 1806 ntAPPRIS P1 TSL 1 (best) BASIC20.43■□□□□ 0.86
SSX2IPQ9Y2D8 TFRC-202ENST00000392396 5032 ntAPPRIS P3 TSL 1 (best) BASIC20.43■□□□□ 0.86
SSX2IPQ9Y2D8 ZMYM5-202ENST00000382905 1382 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
SSX2IPQ9Y2D8 ANXA8L1-203ENST00000613703 1874 ntTSL 2 BASIC20.43■□□□□ 0.86
SSX2IPQ9Y2D8 ARHGEF28-203ENST00000426542 6118 ntAPPRIS ALT2 TSL 1 (best) BASIC20.43■□□□□ 0.86
SSX2IPQ9Y2D8 PFDN6-206ENST00000463584 1915 ntTSL 3 BASIC20.43■□□□□ 0.86
SSX2IPQ9Y2D8 CYP21A1P-201ENST00000342991 1971 ntTSL 3 BASIC20.43■□□□□ 0.86
SSX2IPQ9Y2D8 LINC00482-201ENST00000332012 2023 ntTSL 1 (best) BASIC20.43■□□□□ 0.86
SSX2IPQ9Y2D8 SLC38A11-203ENST00000409149 1621 ntAPPRIS P2 TSL 2 BASIC20.42■□□□□ 0.86
SSX2IPQ9Y2D8 SPOCK3-204ENST00000502330 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC20.42■□□□□ 0.86
SSX2IPQ9Y2D8 APBB3-203ENST00000357560 2218 ntAPPRIS P3 TSL 5 BASIC20.42■□□□□ 0.86
SSX2IPQ9Y2D8 POLE2-202ENST00000539565 1792 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
SSX2IPQ9Y2D8 SSR1-204ENST00000474597 1808 ntTSL 5 BASIC20.42■□□□□ 0.86
SSX2IPQ9Y2D8 PIN1-201ENST00000247970 997 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
SSX2IPQ9Y2D8 TMEM160-201ENST00000253047 663 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
SSX2IPQ9Y2D8 BUD23-201ENST00000265758 1230 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
SSX2IPQ9Y2D8 TNNT3-206ENST00000381579 1042 ntAPPRIS ALT2 TSL 1 (best) BASIC20.42■□□□□ 0.86
SSX2IPQ9Y2D8 C21orf91-202ENST00000400558 1090 ntTSL 1 (best) BASIC20.42■□□□□ 0.86
SSX2IPQ9Y2D8 AC074183.1-201ENST00000439105 782 ntTSL 5 BASIC20.42■□□□□ 0.86
SSX2IPQ9Y2D8 AC019068.1-202ENST00000483218 768 ntTSL 3 BASIC20.42■□□□□ 0.86
SSX2IPQ9Y2D8 CMTM3-210ENST00000565666 769 ntTSL 3 BASIC20.42■□□□□ 0.86
SSX2IPQ9Y2D8 C1QTNF8-202ENST00000621771 897 ntTSL 5 BASIC20.42■□□□□ 0.86
SSX2IPQ9Y2D8 AP005212.1-201ENST00000581547 1997 ntBASIC20.42■□□□□ 0.86
SSX2IPQ9Y2D8 LRRC42-203ENST00000371370 2037 ntAPPRIS P1 TSL 2 BASIC20.42■□□□□ 0.86
SSX2IPQ9Y2D8 EDEM1-204ENST00000445686 1363 ntTSL 2 BASIC20.42■□□□□ 0.86
SSX2IPQ9Y2D8 NOL3-211ENST00000568146 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC20.42■□□□□ 0.86
SSX2IPQ9Y2D8 DHRS4-201ENST00000313250 1443 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
SSX2IPQ9Y2D8 GALE-201ENST00000374497 1488 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
SSX2IPQ9Y2D8 SPOPL-201ENST00000280098 6025 ntAPPRIS P1 TSL 1 (best) BASIC20.42■□□□□ 0.86
SSX2IPQ9Y2D8 SNHG10-201ENST00000500370 1531 ntTSL 2 BASIC20.42■□□□□ 0.86
SSX2IPQ9Y2D8 CCDC91-207ENST00000539107 2440 ntTSL 5 BASIC20.42■□□□□ 0.86
SSX2IPQ9Y2D8 COL16A1-203ENST00000373672 5736 ntAPPRIS P1 TSL 5 BASIC20.42■□□□□ 0.86
SSX2IPQ9Y2D8 ESR2-212ENST00000556275 2695 ntTSL 2 BASIC20.41■□□□□ 0.86
SSX2IPQ9Y2D8 TPBGL-201ENST00000562197 2793 ntAPPRIS P1 BASIC20.41■□□□□ 0.86
SSX2IPQ9Y2D8 PCCB-208ENST00000468777 1877 ntAPPRIS ALT2 TSL 3 BASIC20.41■□□□□ 0.86
SSX2IPQ9Y2D8 BCKDK-202ENST00000287507 1907 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
Retrieved 100 of 98,524 protein–RNA pairs in 29.7 ms