Protein–RNA interactions for Protein: Q9NUQ8

ABCF3, ATP-binding cassette sub-family F member 3, humanhuman

Predictions only

Length 709 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF3Q9NUQ8 AC073210.2-201ENST00000430369 194 ntBASIC19.33■□□□□ 0.68
ABCF3Q9NUQ8 AC008667.2-201ENST00000504413 469 ntTSL 3 BASIC19.33■□□□□ 0.68
ABCF3Q9NUQ8 ZNF436-AS1-206ENST00000518821 461 ntTSL 2 BASIC19.33■□□□□ 0.68
ABCF3Q9NUQ8 C17orf107-202ENST00000521575 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.68
ABCF3Q9NUQ8 AC080023.1-201ENST00000526906 803 ntTSL 2 BASIC19.33■□□□□ 0.68
ABCF3Q9NUQ8 AL356020.1-201ENST00000554235 1076 ntTSL 5 BASIC19.33■□□□□ 0.68
ABCF3Q9NUQ8 TXNL4A-203ENST00000585474 1185 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
ABCF3Q9NUQ8 CD99-210ENST00000611428 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.68
ABCF3Q9NUQ8 GGTLC2-204ENST00000613850 973 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
ABCF3Q9NUQ8 GGTLC2-205ENST00000618722 1047 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
ABCF3Q9NUQ8 HLX-201ENST00000366903 2280 ntAPPRIS P2 TSL 1 (best) BASIC19.33■□□□□ 0.68
ABCF3Q9NUQ8 SPEG-203ENST00000396688 1457 ntTSL 3 BASIC19.33■□□□□ 0.68
ABCF3Q9NUQ8 AP003071.5-201ENST00000641568 2695 ntAPPRIS P1 BASIC19.33■□□□□ 0.68
ABCF3Q9NUQ8 SLCO6A1-201ENST00000379807 2437 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
ABCF3Q9NUQ8 MMD2-202ENST00000404774 2415 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
ABCF3Q9NUQ8 APP-202ENST00000348990 3355 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
ABCF3Q9NUQ8 RGMA-208ENST00000556658 1889 ntTSL 1 (best) BASIC19.33■□□□□ 0.68
ABCF3Q9NUQ8 TXNRD3-203ENST00000524230 2950 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
ABCF3Q9NUQ8 PRKRIP1-208ENST00000496391 3430 ntAPPRIS P1 TSL 2 BASIC19.32■□□□□ 0.68
ABCF3Q9NUQ8 CBLC-201ENST00000270279 1579 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
ABCF3Q9NUQ8 CPEB2-202ENST00000345451 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
ABCF3Q9NUQ8 ARHGDIA-202ENST00000400721 1568 ntTSL 2 BASIC19.32■□□□□ 0.68
ABCF3Q9NUQ8 PSPC1-206ENST00000619300 2013 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
ABCF3Q9NUQ8 EIF2B5-201ENST00000273783 2655 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
ABCF3Q9NUQ8 PRAF2-202ENST00000553851 1334 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
ABCF3Q9NUQ8 WT1-211ENST00000639907 1545 ntAPPRIS ALT2 TSL 2 BASIC19.32■□□□□ 0.68
ABCF3Q9NUQ8 FMR1-207ENST00000439526 3699 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
ABCF3Q9NUQ8 EEF1A1-203ENST00000331523 1923 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
ABCF3Q9NUQ8 TMC6-202ENST00000322914 2786 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
ABCF3Q9NUQ8 ZNF74-201ENST00000357502 2788 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
ABCF3Q9NUQ8 AL161908.1-201ENST00000451449 449 ntTSL 2 BASIC19.32■□□□□ 0.68
ABCF3Q9NUQ8 NCBP2-207ENST00000452404 1133 ntTSL 2 BASIC19.32■□□□□ 0.68
ABCF3Q9NUQ8 AL359182.2-201ENST00000457720 606 ntTSL 3 BASIC19.32■□□□□ 0.68
ABCF3Q9NUQ8 ABCC3-217ENST00000515707 656 ntTSL 3 BASIC19.32■□□□□ 0.68
ABCF3Q9NUQ8 PNMA6B-201ENST00000538162 1200 ntBASIC19.32■□□□□ 0.68
ABCF3Q9NUQ8 IGFBP6-203ENST00000548547 1177 ntAPPRIS ALT2 TSL 5 BASIC19.32■□□□□ 0.68
ABCF3Q9NUQ8 NDUFB10-204ENST00000569148 628 ntTSL 2 BASIC19.32■□□□□ 0.68
ABCF3Q9NUQ8 AC060766.5-201ENST00000590539 871 ntBASIC19.32■□□□□ 0.68
ABCF3Q9NUQ8 MMP25-204ENST00000612971 1017 ntTSL 5 BASIC19.32■□□□□ 0.68
ABCF3Q9NUQ8 KCNK4-201ENST00000394525 1673 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
ABCF3Q9NUQ8 ABHD1-201ENST00000316470 1400 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
ABCF3Q9NUQ8 INPP5J-205ENST00000404390 2215 ntAPPRIS P3 TSL 2 BASIC19.32■□□□□ 0.68
ABCF3Q9NUQ8 AJUBA-202ENST00000361265 2569 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
ABCF3Q9NUQ8 TRIM63-201ENST00000374272 1770 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
ABCF3Q9NUQ8 SSBP2-218ENST00000514493 1790 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
ABCF3Q9NUQ8 FGFR3-202ENST00000340107 4293 ntAPPRIS ALT2 TSL 5 BASIC19.31■□□□□ 0.68
ABCF3Q9NUQ8 GABBR1-204ENST00000377016 4299 ntTSL 5 BASIC19.31■□□□□ 0.68
ABCF3Q9NUQ8 GTF2H4-201ENST00000259895 1735 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
ABCF3Q9NUQ8 FBLN1-201ENST00000262722 2251 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
ABCF3Q9NUQ8 IFRD2-204ENST00000436390 2275 ntAPPRIS P1 TSL 2 BASIC19.31■□□□□ 0.68
ABCF3Q9NUQ8 FARSA-207ENST00000588025 2057 ntTSL 5 BASIC19.31■□□□□ 0.68
ABCF3Q9NUQ8 NAPRT-203ENST00000435154 1877 ntTSL 2 BASIC19.31■□□□□ 0.68
ABCF3Q9NUQ8 RASA4B-201ENST00000306682 2589 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
ABCF3Q9NUQ8 AC124283.5-201ENST00000624661 1809 ntBASIC19.31■□□□□ 0.68
ABCF3Q9NUQ8 MZB1-201ENST00000302125 825 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
ABCF3Q9NUQ8 TRAPPC5-201ENST00000317378 790 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
ABCF3Q9NUQ8 ZNF295-AS1-201ENST00000412906 952 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
ABCF3Q9NUQ8 AL807752.2-201ENST00000435463 301 ntTSL 3 BASIC19.31■□□□□ 0.68
ABCF3Q9NUQ8 AC023632.3-201ENST00000521633 145 ntBASIC19.31■□□□□ 0.68
ABCF3Q9NUQ8 SOX15-202ENST00000538513 1050 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
ABCF3Q9NUQ8 LINC00304-202ENST00000562248 1095 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
ABCF3Q9NUQ8 FAM219B-212ENST00000565772 1249 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
ABCF3Q9NUQ8 SOX15-203ENST00000570788 1093 ntBASIC19.31■□□□□ 0.68
ABCF3Q9NUQ8 ASPSCR1-211ENST00000581647 720 ntTSL 2 BASIC19.31■□□□□ 0.68
ABCF3Q9NUQ8 PSME3-210ENST00000590720 998 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
ABCF3Q9NUQ8 TRAPPC5-203ENST00000595985 411 ntTSL 3 BASIC19.31■□□□□ 0.68
ABCF3Q9NUQ8 BANP-202ENST00000355022 2164 ntTSL 1 (best) BASIC19.31■□□□□ 0.68
ABCF3Q9NUQ8 NPAS1-207ENST00000602189 1643 ntTSL 5 BASIC19.31■□□□□ 0.68
ABCF3Q9NUQ8 AC067852.2-201ENST00000590513 2313 ntBASIC19.31■□□□□ 0.68
ABCF3Q9NUQ8 EFTUD1P1-204ENST00000560401 1798 ntBASIC19.31■□□□□ 0.68
ABCF3Q9NUQ8 AL031598.1-201ENST00000561511 1773 ntBASIC19.31■□□□□ 0.68
ABCF3Q9NUQ8 SULF2-201ENST00000359930 4915 ntAPPRIS P4 TSL 1 (best) BASIC19.31■□□□□ 0.68
ABCF3Q9NUQ8 SNX7-205ENST00000529992 1589 ntTSL 2 BASIC19.31■□□□□ 0.68
ABCF3Q9NUQ8 HOXA13-201ENST00000222753 5030 ntAPPRIS P1 TSL 1 (best) BASIC19.31■□□□□ 0.68
ABCF3Q9NUQ8 TAB2-209ENST00000637181 4230 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
ABCF3Q9NUQ8 P2RY6-210ENST00000542092 1674 ntAPPRIS P1 TSL 2 BASIC19.3■□□□□ 0.68
ABCF3Q9NUQ8 CACNA1A-253ENST00000637927 6847 ntAPPRIS ALT2 TSL 5 BASIC19.3■□□□□ 0.68
ABCF3Q9NUQ8 PCSK5-202ENST00000376767 2845 ntTSL 2 BASIC19.3■□□□□ 0.68
ABCF3Q9NUQ8 OGG1-204ENST00000339511 1815 ntTSL 2 BASIC19.3■□□□□ 0.68
ABCF3Q9NUQ8 PPP2R2C-209ENST00000515571 1832 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
ABCF3Q9NUQ8 SLC47A1-202ENST00000395585 1998 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
ABCF3Q9NUQ8 SIL1-202ENST00000394817 1923 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
ABCF3Q9NUQ8 RER1-204ENST00000378518 522 ntTSL 3 BASIC19.3■□□□□ 0.68
ABCF3Q9NUQ8 LY6E-202ENST00000429120 1173 ntAPPRIS P2 TSL 1 (best) BASIC19.3■□□□□ 0.68
ABCF3Q9NUQ8 MCRIP1-203ENST00000538396 925 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
ABCF3Q9NUQ8 AC005829.2-201ENST00000571422 1056 ntBASIC19.3■□□□□ 0.68
ABCF3Q9NUQ8 TIMM50-213ENST00000599794 786 ntTSL 2 BASIC19.3■□□□□ 0.68
ABCF3Q9NUQ8 HLA-B-256ENST00000639848 1089 ntBASIC19.3■□□□□ 0.68
ABCF3Q9NUQ8 LHX8-201ENST00000294638 2373 ntAPPRIS P3 TSL 1 (best) BASIC19.3■□□□□ 0.68
ABCF3Q9NUQ8 ANKRD2-202ENST00000307518 1449 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
ABCF3Q9NUQ8 RAB34-201ENST00000301043 1592 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
ABCF3Q9NUQ8 GSEC-202ENST00000629441 1572 ntTSL 2 BASIC19.3■□□□□ 0.68
ABCF3Q9NUQ8 TES-201ENST00000358204 2782 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
ABCF3Q9NUQ8 AUNIP-203ENST00000538789 1392 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
ABCF3Q9NUQ8 HNRNPLL-206ENST00000410076 1687 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
ABCF3Q9NUQ8 ANKMY1-209ENST00000405523 1827 ntTSL 1 (best) BASIC19.3■□□□□ 0.68
ABCF3Q9NUQ8 SLC3A2-202ENST00000377889 1993 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
ABCF3Q9NUQ8 ADRA1A-201ENST00000276393 2281 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
ABCF3Q9NUQ8 PDZD3-202ENST00000355547 2252 ntAPPRIS P1 TSL 1 (best) BASIC19.3■□□□□ 0.68
ABCF3Q9NUQ8 SCARB1-203ENST00000415380 2731 ntTSL 2 BASIC19.3■□□□□ 0.68
Retrieved 100 of 98,524 protein–RNA pairs in 34.5 ms