Protein–RNA interactions for Protein: Q9NRR8

CDC42SE1, CDC42 small effector protein 1, humanhuman

Predictions only

Length 79 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1Q9NRR8 TBC1D9B-201ENST00000355235 5119 ntAPPRIS P3 TSL 5 BASIC9.8□□□□□ -0.84
CDC42SE1Q9NRR8 CAMK1D-204ENST00000619168 8153 ntAPPRIS P4 TSL 1 (best) BASIC9.8□□□□□ -0.84
CDC42SE1Q9NRR8 SIPA1-201ENST00000394224 3628 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
CDC42SE1Q9NRR8 FGFR1OP2-201ENST00000229395 2924 ntTSL 2 BASIC9.8□□□□□ -0.84
CDC42SE1Q9NRR8 FRMD6-AS1-201ENST00000617151 2229 ntBASIC9.8□□□□□ -0.84
CDC42SE1Q9NRR8 TMEM175-201ENST00000264771 1860 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
CDC42SE1Q9NRR8 HLA-A-204ENST00000396634 1868 ntAPPRIS P1 BASIC9.8□□□□□ -0.84
CDC42SE1Q9NRR8 TBC1D9B-202ENST00000356834 5173 ntAPPRIS ALT2 TSL 1 (best) BASIC9.8□□□□□ -0.84
CDC42SE1Q9NRR8 RAPGEF1-202ENST00000372190 6045 ntAPPRIS P4 TSL 1 (best) BASIC9.8□□□□□ -0.84
CDC42SE1Q9NRR8 CDK8-201ENST00000381527 3055 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
CDC42SE1Q9NRR8 NPEPL1-203ENST00000525817 1780 ntTSL 2 BASIC9.8□□□□□ -0.84
CDC42SE1Q9NRR8 ABCG5-201ENST00000260645 2740 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
CDC42SE1Q9NRR8 DYSF-201ENST00000258104 6796 ntAPPRIS P3 TSL 1 (best) BASIC9.8□□□□□ -0.84
CDC42SE1Q9NRR8 DYSF-204ENST00000409582 6790 ntAPPRIS ALT2 TSL 1 (best) BASIC9.8□□□□□ -0.84
CDC42SE1Q9NRR8 DYSF-210ENST00000413539 6769 ntAPPRIS ALT2 TSL 1 (best) BASIC9.8□□□□□ -0.84
CDC42SE1Q9NRR8 MYRIP-202ENST00000396217 4877 ntTSL 1 (best) BASIC9.8□□□□□ -0.84
CDC42SE1Q9NRR8 IFT140-201ENST00000361339 2987 ntTSL 1 (best) BASIC9.8□□□□□ -0.84
CDC42SE1Q9NRR8 UNC119B-201ENST00000344651 4404 ntAPPRIS P1 TSL 2 BASIC9.8□□□□□ -0.84
CDC42SE1Q9NRR8 PLTP-205ENST00000477313 2255 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
CDC42SE1Q9NRR8 NDUFA11-205ENST00000592634 2154 ntTSL 2 BASIC9.8□□□□□ -0.84
CDC42SE1Q9NRR8 ZNF180-202ENST00000391956 3049 ntAPPRIS ALT2 TSL 2 BASIC9.8□□□□□ -0.84
CDC42SE1Q9NRR8 UBALD2-201ENST00000327490 1593 ntAPPRIS P1 TSL 1 (best) BASIC9.8□□□□□ -0.84
CDC42SE1Q9NRR8 GXYLT2-201ENST00000389617 3260 ntAPPRIS P1 TSL 5 BASIC9.8□□□□□ -0.84
CDC42SE1Q9NRR8 DNM2-201ENST00000355667 3541 ntTSL 1 (best) BASIC9.79□□□□□ -0.84
CDC42SE1Q9NRR8 MTA3-203ENST00000406652 5484 ntTSL 1 (best) BASIC9.79□□□□□ -0.84
CDC42SE1Q9NRR8 AC006333.2-201ENST00000607957 2099 ntBASIC9.79□□□□□ -0.84
CDC42SE1Q9NRR8 DOC2A-218ENST00000616445 2065 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
CDC42SE1Q9NRR8 AKAP12-204ENST00000402676 8432 ntAPPRIS P4 TSL 5 BASIC9.79□□□□□ -0.84
CDC42SE1Q9NRR8 SMIM19-203ENST00000417410 1466 ntAPPRIS P1 TSL 2 BASIC9.79□□□□□ -0.84
CDC42SE1Q9NRR8 KCTD15-201ENST00000284006 4918 ntTSL 1 (best) BASIC9.79□□□□□ -0.84
CDC42SE1Q9NRR8 NCK1-207ENST00000481752 1971 ntAPPRIS P1 TSL 5 BASIC9.79□□□□□ -0.84
CDC42SE1Q9NRR8 ARL10-201ENST00000310389 10845 ntAPPRIS P1 TSL 2 BASIC9.79□□□□□ -0.84
CDC42SE1Q9NRR8 NTRK2-201ENST00000277120 8633 ntAPPRIS P3 TSL 1 (best) BASIC9.79□□□□□ -0.84
CDC42SE1Q9NRR8 RDH13-203ENST00000415061 1871 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
CDC42SE1Q9NRR8 EMC10-206ENST00000598585 1610 ntAPPRIS ALT2 TSL 5 BASIC9.79□□□□□ -0.84
CDC42SE1Q9NRR8 ARAP2-201ENST00000303965 7514 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
CDC42SE1Q9NRR8 JPH4-201ENST00000356300 4278 ntAPPRIS P2 TSL 1 (best) BASIC9.79□□□□□ -0.84
CDC42SE1Q9NRR8 NDRG1-202ENST00000414097 3755 ntAPPRIS P1 TSL 2 BASIC9.79□□□□□ -0.84
CDC42SE1Q9NRR8 SLC45A1-202ENST00000471889 2784 ntTSL 5 BASIC9.79□□□□□ -0.84
CDC42SE1Q9NRR8 A4GALT-201ENST00000249005 2020 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
CDC42SE1Q9NRR8 CTSB-228ENST00000533455 2009 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
CDC42SE1Q9NRR8 PPL-205ENST00000590782 5845 ntAPPRIS ALT1 TSL 5 BASIC9.79□□□□□ -0.84
CDC42SE1Q9NRR8 HMGA1-202ENST00000347617 1773 ntAPPRIS ALT1 TSL 1 (best) BASIC9.79□□□□□ -0.84
CDC42SE1Q9NRR8 CBL-204ENST00000634840 4813 ntAPPRIS ALT2 TSL 5 BASIC9.79□□□□□ -0.84
CDC42SE1Q9NRR8 MBLAC1-201ENST00000398075 1502 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
CDC42SE1Q9NRR8 ANK1-202ENST00000289734 8297 ntAPPRIS ALT2 TSL 1 (best) BASIC9.79□□□□□ -0.84
CDC42SE1Q9NRR8 ATG2A-201ENST00000377264 6357 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
CDC42SE1Q9NRR8 SATB1-AS1-216ENST00000598149 1119 ntTSL 2 BASIC9.79□□□□□ -0.84
CDC42SE1Q9NRR8 ALAS2-203ENST00000396198 1936 ntTSL 5 BASIC9.79□□□□□ -0.84
CDC42SE1Q9NRR8 ADRA2A-201ENST00000280155 3745 ntAPPRIS P1 BASIC9.79□□□□□ -0.84
CDC42SE1Q9NRR8 DACT1-202ENST00000395153 3734 ntAPPRIS ALT2 TSL 5 BASIC9.79□□□□□ -0.84
CDC42SE1Q9NRR8 AC026954.2-202ENST00000575474 2571 ntAPPRIS P5 TSL 5 BASIC9.79□□□□□ -0.84
CDC42SE1Q9NRR8 TACC3-213ENST00000617535 1693 ntTSL 5 BASIC9.79□□□□□ -0.84
CDC42SE1Q9NRR8 GPR149-201ENST00000389740 2323 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
CDC42SE1Q9NRR8 RPS6KL1-201ENST00000354625 5195 ntAPPRIS P1 TSL 2 BASIC9.79□□□□□ -0.84
CDC42SE1Q9NRR8 OSGIN2-202ENST00000451899 4266 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
CDC42SE1Q9NRR8 LINC02199-201ENST00000506655 2702 ntBASIC9.79□□□□□ -0.84
CDC42SE1Q9NRR8 MAPK8IP2-202ENST00000329492 3381 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
CDC42SE1Q9NRR8 CHAT-201ENST00000337653 2458 ntAPPRIS P4 TSL 1 (best) BASIC9.79□□□□□ -0.84
CDC42SE1Q9NRR8 ZSCAN2-214ENST00000546148 2242 ntAPPRIS P2 TSL 2 BASIC9.79□□□□□ -0.84
CDC42SE1Q9NRR8 UBR5-201ENST00000220959 9418 ntAPPRIS ALT1 TSL 1 (best) BASIC9.79□□□□□ -0.84
CDC42SE1Q9NRR8 RTEL1-205ENST00000370018 4955 ntTSL 1 (best) BASIC9.79□□□□□ -0.84
CDC42SE1Q9NRR8 TPM1-208ENST00000404484 1568 ntTSL 1 (best) BASIC9.79□□□□□ -0.84
CDC42SE1Q9NRR8 HSD11B1L-209ENST00000577917 1553 ntTSL 1 (best) BASIC9.79□□□□□ -0.84
CDC42SE1Q9NRR8 PCDHA10-201ENST00000307360 5254 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
CDC42SE1Q9NRR8 OSBPL10-201ENST00000396556 6600 ntAPPRIS P3 TSL 1 (best) BASIC9.79□□□□□ -0.84
CDC42SE1Q9NRR8 SPAG9-222ENST00000618113 8246 ntAPPRIS ALT1 TSL 5 BASIC9.79□□□□□ -0.84
CDC42SE1Q9NRR8 ISY1-201ENST00000273541 1704 ntTSL 1 (best) BASIC9.79□□□□□ -0.84
CDC42SE1Q9NRR8 TM7SF2-201ENST00000279263 1722 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
CDC42SE1Q9NRR8 WWTR1-201ENST00000360632 2103 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
CDC42SE1Q9NRR8 PANK4-201ENST00000378466 2677 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
CDC42SE1Q9NRR8 SLC25A20-201ENST00000319017 1879 ntAPPRIS P1 TSL 1 (best) BASIC9.79□□□□□ -0.84
CDC42SE1Q9NRR8 MVB12B-201ENST00000361171 4819 ntAPPRIS P1 TSL 2 BASIC9.79□□□□□ -0.84
CDC42SE1Q9NRR8 IL12RB2-206ENST00000544434 3782 ntTSL 1 (best) BASIC9.78□□□□□ -0.84
CDC42SE1Q9NRR8 ACTG1-208ENST00000575087 2001 ntAPPRIS P1 TSL 5 BASIC9.78□□□□□ -0.84
CDC42SE1Q9NRR8 USF2-201ENST00000222305 1634 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
CDC42SE1Q9NRR8 RBFOX1-215ENST00000553186 2196 ntTSL 1 (best) BASIC9.78□□□□□ -0.84
CDC42SE1Q9NRR8 TCTN1-225ENST00000551590 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC9.78□□□□□ -0.84
CDC42SE1Q9NRR8 CYP11A1-201ENST00000268053 1934 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
CDC42SE1Q9NRR8 SLC2A8-202ENST00000373360 1937 ntTSL 1 (best) BASIC9.78□□□□□ -0.84
CDC42SE1Q9NRR8 MOCS1-206ENST00000425303 1920 ntTSL 2 BASIC9.78□□□□□ -0.84
CDC42SE1Q9NRR8 SLC6A11-201ENST00000254488 4296 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
CDC42SE1Q9NRR8 GRAMD2B-201ENST00000285689 3175 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
CDC42SE1Q9NRR8 SMPD3-203ENST00000563226 2093 ntTSL 1 (best) BASIC9.78□□□□□ -0.84
CDC42SE1Q9NRR8 DNAAF1-201ENST00000378553 2379 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
CDC42SE1Q9NRR8 SPRYD7-202ENST00000378195 3086 ntTSL 2 BASIC9.78□□□□□ -0.84
CDC42SE1Q9NRR8 FEZF1-AS1-202ENST00000428449 2653 ntTSL 2 BASIC9.78□□□□□ -0.84
CDC42SE1Q9NRR8 RUSC1-203ENST00000368349 1968 ntAPPRIS P3 TSL 1 (best) BASIC9.78□□□□□ -0.84
CDC42SE1Q9NRR8 C22orf39-206ENST00000611555 1977 ntTSL 1 (best) BASIC9.78□□□□□ -0.84
CDC42SE1Q9NRR8 SPRED1-201ENST00000299084 7780 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
CDC42SE1Q9NRR8 GSTP1-202ENST00000398606 965 ntAPPRIS P1 TSL 1 (best) BASIC9.78□□□□□ -0.84
CDC42SE1Q9NRR8 NF2-209ENST00000403999 2999 ntAPPRIS ALT1 TSL 1 (best) BASIC9.78□□□□□ -0.84
CDC42SE1Q9NRR8 DNAJC14-203ENST00000357606 3416 ntAPPRIS P1 TSL 5 BASIC9.78□□□□□ -0.84
CDC42SE1Q9NRR8 PTPRF-201ENST00000359947 7727 ntTSL 1 (best) BASIC9.78□□□□□ -0.84
CDC42SE1Q9NRR8 BX088651.4-201ENST00000435586 2579 ntTSL 2 BASIC9.78□□□□□ -0.84
CDC42SE1Q9NRR8 MECP2-205ENST00000453960 1729 ntTSL 1 (best) BASIC9.78□□□□□ -0.84
CDC42SE1Q9NRR8 CELF6-201ENST00000287202 3345 ntAPPRIS P3 TSL 1 (best) BASIC9.78□□□□□ -0.84
CDC42SE1Q9NRR8 OLIG3-201ENST00000367734 2049 ntAPPRIS P1 BASIC9.78□□□□□ -0.84
CDC42SE1Q9NRR8 TMC5-202ENST00000381414 4755 ntTSL 1 (best) BASIC9.78□□□□□ -0.84
CDC42SE1Q9NRR8 IQCE-203ENST00000402050 6844 ntAPPRIS P3 TSL 1 (best) BASIC9.78□□□□□ -0.84
Retrieved 100 of 98,524 protein–RNA pairs in 58.4 ms