Protein–RNA interactions for Protein: Q9HBL6

LRTM1, Leucine-rich repeat and transmembrane domain-containing protein 1, humanhuman

Predictions only

Length 345 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRTM1Q9HBL6 KLHL17-201ENST00000338591 2560 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
LRTM1Q9HBL6 ABCG4-206ENST00000622721 2553 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
LRTM1Q9HBL6 CREG2-201ENST00000324768 6383 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
LRTM1Q9HBL6 GPSM1-203ENST00000392944 1111 ntTSL 3 BASIC18.31■□□□□ 0.52
LRTM1Q9HBL6 APTR-205ENST00000447009 902 ntTSL 2 BASIC18.31■□□□□ 0.52
LRTM1Q9HBL6 FAM163B-202ENST00000496132 811 ntAPPRIS P1 TSL 3 BASIC18.31■□□□□ 0.52
LRTM1Q9HBL6 C14orf28-204ENST00000557112 1097 ntTSL 5 BASIC18.31■□□□□ 0.52
LRTM1Q9HBL6 CMTM3-207ENST00000564060 824 ntTSL 2 BASIC18.31■□□□□ 0.52
LRTM1Q9HBL6 CMTM3-211ENST00000565922 615 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
LRTM1Q9HBL6 ASPSCR1-211ENST00000581647 720 ntTSL 2 BASIC18.31■□□□□ 0.52
LRTM1Q9HBL6 TPGS2-221ENST00000614939 1268 ntTSL 4 BASIC18.31■□□□□ 0.52
LRTM1Q9HBL6 AC013268.1-201ENST00000639717 1208 ntTSL 5 BASIC18.31■□□□□ 0.52
LRTM1Q9HBL6 PLEKHB2-204ENST00000409158 2277 ntTSL 2 BASIC18.31■□□□□ 0.52
LRTM1Q9HBL6 ADGRD2-201ENST00000334810 3244 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
LRTM1Q9HBL6 TSPAN4-204ENST00000397404 1462 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
LRTM1Q9HBL6 MSLN-207ENST00000566549 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
LRTM1Q9HBL6 SH3BP1-201ENST00000357436 2852 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
LRTM1Q9HBL6 HBEGF-201ENST00000230990 2386 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
LRTM1Q9HBL6 SNX4-201ENST00000251775 2513 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
LRTM1Q9HBL6 RASSF1-210ENST00000616212 1842 ntTSL 2 BASIC18.3■□□□□ 0.52
LRTM1Q9HBL6 WIZP1-201ENST00000531444 2299 ntBASIC18.3■□□□□ 0.52
LRTM1Q9HBL6 GCSH-201ENST00000315467 1597 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
LRTM1Q9HBL6 NCK2-205ENST00000451463 1795 ntTSL 2 BASIC18.3■□□□□ 0.52
LRTM1Q9HBL6 ZNF213-201ENST00000396878 3313 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
LRTM1Q9HBL6 CEACAM3-202ENST00000357396 1316 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
LRTM1Q9HBL6 AC083805.3-201ENST00000619560 1315 ntTSL 3 BASIC18.3■□□□□ 0.52
LRTM1Q9HBL6 TMEM109-201ENST00000227525 2413 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
LRTM1Q9HBL6 PRODH-215ENST00000610940 2405 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
LRTM1Q9HBL6 P2RX5-203ENST00000547178 1998 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
LRTM1Q9HBL6 CYP2F1-201ENST00000331105 1720 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
LRTM1Q9HBL6 DLK1-202ENST00000341267 4722 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
LRTM1Q9HBL6 FBXL18-203ENST00000453700 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
LRTM1Q9HBL6 FGFR3-202ENST00000340107 4293 ntAPPRIS ALT2 TSL 5 BASIC18.3■□□□□ 0.52
LRTM1Q9HBL6 DPP10-203ENST00000393147 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
LRTM1Q9HBL6 CD99-203ENST00000381184 918 ntAPPRIS ALT2 TSL 5 BASIC18.3■□□□□ 0.52
LRTM1Q9HBL6 COQ10B-203ENST00000409398 879 ntTSL 3 BASIC18.3■□□□□ 0.52
LRTM1Q9HBL6 KRT17P3-201ENST00000420566 1262 ntBASIC18.3■□□□□ 0.52
LRTM1Q9HBL6 DYNLT3-203ENST00000432389 719 ntTSL 5 BASIC18.3■□□□□ 0.52
LRTM1Q9HBL6 RNA5SP413-201ENST00000516373 109 ntBASIC18.3■□□□□ 0.52
LRTM1Q9HBL6 SCARA5-203ENST00000518030 1074 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
LRTM1Q9HBL6 MIXL1-202ENST00000542034 839 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
LRTM1Q9HBL6 AC073912.1-201ENST00000546264 587 ntTSL 3 BASIC18.3■□□□□ 0.52
LRTM1Q9HBL6 RNASEK-202ENST00000548577 810 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
LRTM1Q9HBL6 AL359399.1-201ENST00000557610 462 ntTSL 3 BASIC18.3■□□□□ 0.52
LRTM1Q9HBL6 CLN6-207ENST00000566347 981 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
LRTM1Q9HBL6 MTDHP1-201ENST00000605323 784 ntBASIC18.3■□□□□ 0.52
LRTM1Q9HBL6 DMD-208ENST00000378680 1858 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
LRTM1Q9HBL6 ENOPH1-203ENST00000509635 1874 ntTSL 3 BASIC18.3■□□□□ 0.52
LRTM1Q9HBL6 SEC11C-202ENST00000509791 2054 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
LRTM1Q9HBL6 AIRE-201ENST00000291582 2257 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
LRTM1Q9HBL6 JAK2-201ENST00000381652 5285 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
LRTM1Q9HBL6 C19orf25-203ENST00000585675 1837 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
LRTM1Q9HBL6 CHPF-203ENST00000535926 2634 ntTSL 2 BASIC18.3■□□□□ 0.52
LRTM1Q9HBL6 SMARCD1-201ENST00000381513 3237 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
LRTM1Q9HBL6 SSC5D-201ENST00000389623 4845 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
LRTM1Q9HBL6 FOXI1-201ENST00000306268 1990 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
LRTM1Q9HBL6 MPZ-206ENST00000533357 1955 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
LRTM1Q9HBL6 PSRC1-202ENST00000369904 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
LRTM1Q9HBL6 DNM1-206ENST00000475805 2710 ntAPPRIS ALT1 TSL 2 BASIC18.29■□□□□ 0.52
LRTM1Q9HBL6 IFFO1-212ENST00000619571 2724 ntTSL 2 BASIC18.29■□□□□ 0.52
LRTM1Q9HBL6 SLC6A18-201ENST00000324642 2121 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
LRTM1Q9HBL6 LSM4-203ENST00000593829 1908 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
LRTM1Q9HBL6 RGS9BP-201ENST00000334176 2894 ntAPPRIS P1 BASIC18.29■□□□□ 0.52
LRTM1Q9HBL6 PRELID3A-201ENST00000336990 1715 ntAPPRIS P1 TSL 2 BASIC18.29■□□□□ 0.52
LRTM1Q9HBL6 PRELID3A-202ENST00000440960 1716 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
LRTM1Q9HBL6 FNIP1-204ENST00000511848 1720 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
LRTM1Q9HBL6 MAFF-206ENST00000538320 2458 ntAPPRIS P1 TSL 4 BASIC18.29■□□□□ 0.52
LRTM1Q9HBL6 DDX31-206ENST00000480876 1333 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
LRTM1Q9HBL6 NUP50-AS1-201ENST00000426282 2076 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
LRTM1Q9HBL6 ASPHD2-201ENST00000215906 3357 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
LRTM1Q9HBL6 PLA2G7-201ENST00000274793 1882 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
LRTM1Q9HBL6 TH-203ENST00000352909 1889 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
LRTM1Q9HBL6 TH-205ENST00000381175 1898 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
LRTM1Q9HBL6 AC104581.1-202ENST00000635932 2618 ntBASIC18.29■□□□□ 0.52
LRTM1Q9HBL6 TMEM230-206ENST00000379283 1660 ntAPPRIS P1 TSL 3 BASIC18.29■□□□□ 0.52
LRTM1Q9HBL6 AC026412.3-201ENST00000605200 1661 ntTSL 5 BASIC18.29■□□□□ 0.52
LRTM1Q9HBL6 IGFBP4-201ENST00000269593 2200 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
LRTM1Q9HBL6 KCNMA1-278ENST00000640141 5705 ntAPPRIS ALT2 TSL 5 BASIC18.29■□□□□ 0.52
LRTM1Q9HBL6 RIPK2-201ENST00000220751 2584 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
LRTM1Q9HBL6 HCG11-201ENST00000411553 5696 ntBASIC18.29■□□□□ 0.52
LRTM1Q9HBL6 SHISA5-220ENST00000619810 2385 ntTSL 2 BASIC18.29■□□□□ 0.52
LRTM1Q9HBL6 GOLGA6L5P-202ENST00000515341 1828 ntBASIC18.29■□□□□ 0.52
LRTM1Q9HBL6 WDR74-202ENST00000311713 1153 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
LRTM1Q9HBL6 ANG-201ENST00000336811 1222 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
LRTM1Q9HBL6 NREP-209ENST00000455559 698 ntAPPRIS P1 TSL 4 BASIC18.29■□□□□ 0.52
LRTM1Q9HBL6 C17orf50-201ENST00000603305 569 ntTSL 3 BASIC18.29■□□□□ 0.52
LRTM1Q9HBL6 C17orf50-203ENST00000605587 1018 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
LRTM1Q9HBL6 AC069544.1-201ENST00000609399 999 ntBASIC18.29■□□□□ 0.52
LRTM1Q9HBL6 AC083906.6-201ENST00000641366 219 ntBASIC18.29■□□□□ 0.52
LRTM1Q9HBL6 AK3-202ENST00000381809 2736 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
LRTM1Q9HBL6 SHANK1-202ENST00000359082 6459 ntTSL 5 BASIC18.29■□□□□ 0.52
LRTM1Q9HBL6 TWF2-203ENST00000499914 1440 ntTSL 5 BASIC18.29■□□□□ 0.52
LRTM1Q9HBL6 CNNM3-202ENST00000377060 3308 ntTSL 2 BASIC18.29■□□□□ 0.52
LRTM1Q9HBL6 ANKRD17-211ENST00000639793 3486 ntTSL 5 BASIC18.29■□□□□ 0.52
LRTM1Q9HBL6 UMOD-202ENST00000396134 2408 ntAPPRIS ALT2 TSL 2 BASIC18.29■□□□□ 0.52
LRTM1Q9HBL6 UBE2QL1-201ENST00000399816 4317 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
LRTM1Q9HBL6 DNAJC28-204ENST00000617313 2237 ntAPPRIS P1 TSL 5 BASIC18.29■□□□□ 0.52
LRTM1Q9HBL6 CD72-201ENST00000259633 1548 ntAPPRIS P2 TSL 1 (best) BASIC18.28■□□□□ 0.52
LRTM1Q9HBL6 ACAA1-201ENST00000301810 1540 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
LRTM1Q9HBL6 KCNH1-210ENST00000640044 1818 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 19 ms