Protein–RNA interactions for Protein: Q9HAW0

BRF2, Transcription factor IIIB 50 kDa subunit, humanhuman

Predictions only

Length 419 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRF2Q9HAW0 CHPF-202ENST00000373891 1079 ntTSL 2 BASIC18.21■□□□□ 0.51
BRF2Q9HAW0 DERL1-203ENST00000419562 918 ntTSL 2 BASIC18.21■□□□□ 0.51
BRF2Q9HAW0 SLC12A4-202ENST00000422611 4670 ntTSL 2 BASIC18.21■□□□□ 0.51
BRF2Q9HAW0 BABAM1-202ENST00000447614 930 ntAPPRIS ALT2 TSL 5 BASIC18.21■□□□□ 0.51
BRF2Q9HAW0 FAM201B-201ENST00000458407 597 ntBASIC18.21■□□□□ 0.51
BRF2Q9HAW0 MIR1302-2HG-202ENST00000473358 712 ntTSL 5 BASIC18.21■□□□□ 0.51
BRF2Q9HAW0 FDX2-207ENST00000494368 584 ntTSL 4 BASIC18.21■□□□□ 0.51
BRF2Q9HAW0 TCTN1-223ENST00000550703 2149 ntTSL 2 BASIC18.21■□□□□ 0.51
BRF2Q9HAW0 TMEM235-204ENST00000551068 1187 ntAPPRIS P1 TSL 5 BASIC18.21■□□□□ 0.51
BRF2Q9HAW0 AC140725.1-202ENST00000561145 712 ntTSL 5 BASIC18.21■□□□□ 0.51
BRF2Q9HAW0 ZNF667-AS1-206ENST00000591797 535 ntTSL 5 BASIC18.21■□□□□ 0.51
BRF2Q9HAW0 AC103746.1-201ENST00000617440 1133 ntTSL 3 BASIC18.21■□□□□ 0.51
BRF2Q9HAW0 ITM2C-210ENST00000620962 501 ntBASIC18.21■□□□□ 0.51
BRF2Q9HAW0 SH2B1-202ENST00000337120 6043 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.51
BRF2Q9HAW0 FAM198A-202ENST00000430121 3121 ntAPPRIS P2 TSL 5 BASIC18.21■□□□□ 0.51
BRF2Q9HAW0 YY1AP1-213ENST00000405763 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC18.21■□□□□ 0.51
BRF2Q9HAW0 KRT16P1-201ENST00000399124 1418 ntBASIC18.21■□□□□ 0.51
BRF2Q9HAW0 ACTR3B-203ENST00000397282 1692 ntTSL 2 BASIC18.21■□□□□ 0.51
BRF2Q9HAW0 CYTH1-209ENST00000589296 2159 ntTSL 5 BASIC18.21■□□□□ 0.51
BRF2Q9HAW0 ADPGK-201ENST00000311669 2557 ntAPPRIS P1 TSL 2 BASIC18.21■□□□□ 0.51
BRF2Q9HAW0 EIF3B-202ENST00000397011 2966 ntAPPRIS P1 TSL 1 (best) BASIC18.21■□□□□ 0.5
BRF2Q9HAW0 SENP6-201ENST00000327284 2700 ntTSL 2 BASIC18.21■□□□□ 0.5
BRF2Q9HAW0 FADS2-209ENST00000521849 1703 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
BRF2Q9HAW0 ABHD14B-202ENST00000361143 1636 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
BRF2Q9HAW0 ARHGAP28-203ENST00000383472 2295 ntAPPRIS ALT2 TSL 5 BASIC18.2■□□□□ 0.5
BRF2Q9HAW0 DOLPP1-203ENST00000406974 2037 ntTSL 2 BASIC18.2■□□□□ 0.5
BRF2Q9HAW0 CDC14B-203ENST00000375242 2965 ntTSL 2 BASIC18.2■□□□□ 0.5
BRF2Q9HAW0 PARS2-201ENST00000371279 2347 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
BRF2Q9HAW0 FBXL20-202ENST00000394294 2309 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
BRF2Q9HAW0 PRRC2A-201ENST00000376007 6861 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
BRF2Q9HAW0 ZSWIM5-201ENST00000359600 5819 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
BRF2Q9HAW0 RAB29-203ENST00000414729 1157 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
BRF2Q9HAW0 ABCC5-211ENST00000446941 883 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
BRF2Q9HAW0 RPS2P4-201ENST00000476944 856 ntBASIC18.2■□□□□ 0.5
BRF2Q9HAW0 AC019257.1-201ENST00000517676 557 ntTSL 5 BASIC18.2■□□□□ 0.5
BRF2Q9HAW0 ZNF599-203ENST00000588760 948 ntTSL 2 BASIC18.2■□□□□ 0.5
BRF2Q9HAW0 AC010531.6-201ENST00000602282 401 ntTSL 2 BASIC18.2■□□□□ 0.5
BRF2Q9HAW0 TCERG1L-201ENST00000368642 2618 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
BRF2Q9HAW0 KRT8P11-201ENST00000409686 1436 ntBASIC18.2■□□□□ 0.5
BRF2Q9HAW0 LRRC27-203ENST00000368613 2113 ntAPPRIS P3 TSL 1 (best) BASIC18.2■□□□□ 0.5
BRF2Q9HAW0 AIRE-201ENST00000291582 2257 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
BRF2Q9HAW0 PCCB-216ENST00000483687 1727 ntTSL 3 BASIC18.2■□□□□ 0.5
BRF2Q9HAW0 ISM2-207ENST00000493585 1739 ntTSL 1 (best) BASIC18.2■□□□□ 0.5
BRF2Q9HAW0 GATM-201ENST00000396659 2597 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
BRF2Q9HAW0 FUCA1-201ENST00000374479 2047 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
BRF2Q9HAW0 PODXL2-201ENST00000342480 2186 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
BRF2Q9HAW0 TEKT5-201ENST00000283025 1612 ntAPPRIS P1 TSL 1 (best) BASIC18.2■□□□□ 0.5
BRF2Q9HAW0 RFC2-213ENST00000621097 1635 ntTSL 5 BASIC18.2■□□□□ 0.5
BRF2Q9HAW0 SEPT8-216ENST00000620483 4335 ntTSL 5 BASIC18.19■□□□□ 0.5
BRF2Q9HAW0 FAM189B-204ENST00000368368 2609 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
BRF2Q9HAW0 TMEM198-202ENST00000373883 2218 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
BRF2Q9HAW0 TMEM179-201ENST00000341595 2513 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
BRF2Q9HAW0 KLHL2-201ENST00000226725 3134 ntAPPRIS P3 TSL 1 (best) BASIC18.19■□□□□ 0.5
BRF2Q9HAW0 NR5A1-202ENST00000373588 3104 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
BRF2Q9HAW0 GHDC-212ENST00000593209 1827 ntTSL 5 BASIC18.19■□□□□ 0.5
BRF2Q9HAW0 CLDND2-201ENST00000291715 974 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
BRF2Q9HAW0 BOLA1-203ENST00000369153 1096 ntAPPRIS P1 TSL 3 BASIC18.19■□□□□ 0.5
BRF2Q9HAW0 F8A2-201ENST00000369505 1116 ntAPPRIS P1 BASIC18.19■□□□□ 0.5
BRF2Q9HAW0 PDCD2-202ENST00000392090 936 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
BRF2Q9HAW0 SPAG16-207ENST00000432529 1250 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
BRF2Q9HAW0 SMG1P1-207ENST00000446662 852 ntTSL 5 BASIC18.19■□□□□ 0.5
BRF2Q9HAW0 WT1-205ENST00000452863 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
BRF2Q9HAW0 TNFRSF18-204ENST00000486728 727 ntAPPRIS ALT2 TSL 1 (best) BASIC18.19■□□□□ 0.5
BRF2Q9HAW0 ROPN1L-202ENST00000503804 1291 ntAPPRIS P1 TSL 2 BASIC18.19■□□□□ 0.5
BRF2Q9HAW0 PTTG1-205ENST00000520452 895 ntAPPRIS P1 TSL 3 BASIC18.19■□□□□ 0.5
BRF2Q9HAW0 AF186192.3-201ENST00000583427 947 ntBASIC18.19■□□□□ 0.5
BRF2Q9HAW0 AL031985.4-201ENST00000642138 673 ntBASIC18.19■□□□□ 0.5
BRF2Q9HAW0 NPTX1-201ENST00000306773 5122 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
BRF2Q9HAW0 DNAJC28-204ENST00000617313 2237 ntAPPRIS P1 TSL 5 BASIC18.19■□□□□ 0.5
BRF2Q9HAW0 STX5-202ENST00000377897 1785 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
BRF2Q9HAW0 FDXR-217ENST00000582944 1766 ntTSL 2 BASIC18.19■□□□□ 0.5
BRF2Q9HAW0 ZFP92-201ENST00000338647 6105 ntAPPRIS P1 TSL 5 BASIC18.19■□□□□ 0.5
BRF2Q9HAW0 BPIFB3-201ENST00000375494 1454 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
BRF2Q9HAW0 C20orf27-201ENST00000217195 1302 ntTSL 2 BASIC18.19■□□□□ 0.5
BRF2Q9HAW0 HOXD12-202ENST00000406506 1318 ntAPPRIS P1 TSL 3 BASIC18.19■□□□□ 0.5
BRF2Q9HAW0 RIPK2-201ENST00000220751 2584 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
BRF2Q9HAW0 PLIN2-201ENST00000276914 1972 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
BRF2Q9HAW0 CELF2-217ENST00000638035 1849 ntAPPRIS P3 TSL 5 BASIC18.19■□□□□ 0.5
BRF2Q9HAW0 GPRIN2-201ENST00000374314 1696 ntAPPRIS P1 BASIC18.18■□□□□ 0.5
BRF2Q9HAW0 CD151-201ENST00000322008 1548 ntAPPRIS P2 TSL 1 (best) BASIC18.18■□□□□ 0.5
BRF2Q9HAW0 CCDC27-201ENST00000294600 2176 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
BRF2Q9HAW0 ZNRF3-203ENST00000544604 6851 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
BRF2Q9HAW0 LARGE2-208ENST00000531526 2528 ntAPPRIS P3 TSL 2 BASIC18.18■□□□□ 0.5
BRF2Q9HAW0 SPAG1-206ENST00000520643 1723 ntTSL 2 BASIC18.18■□□□□ 0.5
BRF2Q9HAW0 MEN1-201ENST00000312049 2761 ntAPPRIS ALT1 TSL 1 (best) BASIC18.18■□□□□ 0.5
BRF2Q9HAW0 DIP2A-203ENST00000435722 2760 ntTSL 2 BASIC18.18■□□□□ 0.5
BRF2Q9HAW0 CTAG2-201ENST00000247306 993 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
BRF2Q9HAW0 COX7A1-201ENST00000292907 762 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
BRF2Q9HAW0 RFTN1-201ENST00000334133 2982 ntAPPRIS P2 TSL 1 (best) BASIC18.18■□□□□ 0.5
BRF2Q9HAW0 UNG-202ENST00000336865 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
BRF2Q9HAW0 DMRT2-206ENST00000412350 1244 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
BRF2Q9HAW0 AC073050.1-201ENST00000442316 462 ntTSL 3 BASIC18.18■□□□□ 0.5
BRF2Q9HAW0 MAGI2-AS3-211ENST00000451809 707 ntTSL 3 BASIC18.18■□□□□ 0.5
BRF2Q9HAW0 HGNC:18790-208ENST00000506380 798 ntAPPRIS P1 TSL 3 BASIC18.18■□□□□ 0.5
BRF2Q9HAW0 C5orf49-202ENST00000509627 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC18.18■□□□□ 0.5
BRF2Q9HAW0 AC073195.1-201ENST00000607241 877 ntBASIC18.18■□□□□ 0.5
BRF2Q9HAW0 AL359736.2-201ENST00000621992 437 ntBASIC18.18■□□□□ 0.5
BRF2Q9HAW0 TP53I3-202ENST00000335934 1635 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
BRF2Q9HAW0 C19orf25-203ENST00000585675 1837 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
BRF2Q9HAW0 CASP16P-202ENST00000575497 2161 ntTSL 2 BASIC18.18■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 34.3 ms