Protein–RNA interactions for Protein: Q9H788

SH2D4A, SH2 domain-containing protein 4A, humanhuman

Predictions only

Length 454 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SH2D4AQ9H788 ISCU-202ENST00000392807 1069 ntTSL 1 (best) BASIC22.19■■□□□ 1.14
SH2D4AQ9H788 ISCU-203ENST00000431221 799 ntTSL 2 BASIC22.19■■□□□ 1.14
SH2D4AQ9H788 MAP3K13-213ENST00000454237 526 ntTSL 3 BASIC22.19■■□□□ 1.14
SH2D4AQ9H788 AL136307.1-201ENST00000454882 411 ntTSL 2 BASIC22.19■■□□□ 1.14
SH2D4AQ9H788 REPIN1-210ENST00000482680 1029 ntTSL 2 BASIC22.19■■□□□ 1.14
SH2D4AQ9H788 SSSCA1-206ENST00000531405 879 ntTSL 2 BASIC22.19■■□□□ 1.14
SH2D4AQ9H788 REEP1-207ENST00000535845 1196 ntTSL 2 BASIC22.19■■□□□ 1.14
SH2D4AQ9H788 mascRNA-menRNA.2-201ENST00000616984 58 ntBASIC22.19■■□□□ 1.14
SH2D4AQ9H788 TBC1D3P2-202ENST00000577902 1649 ntBASIC22.19■■□□□ 1.14
SH2D4AQ9H788 SLC35A3-224ENST00000640732 1777 ntTSL 5 BASIC22.19■■□□□ 1.14
SH2D4AQ9H788 SPHK1-207ENST00000590959 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC22.19■■□□□ 1.14
SH2D4AQ9H788 METRNL-203ENST00000571814 1900 ntTSL 1 (best) BASIC22.19■■□□□ 1.14
SH2D4AQ9H788 BYSL-201ENST00000230340 2029 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
SH2D4AQ9H788 PCBP4-212ENST00000484633 2009 ntTSL 5 BASIC22.19■■□□□ 1.14
SH2D4AQ9H788 DVL3-203ENST00000431765 2294 ntTSL 5 BASIC22.19■■□□□ 1.14
SH2D4AQ9H788 AC016065.1-201ENST00000500118 2413 ntTSL 2 BASIC22.19■■□□□ 1.14
SH2D4AQ9H788 KLC1-208ENST00000452929 2453 ntTSL 5 BASIC22.19■■□□□ 1.14
SH2D4AQ9H788 TAF4-201ENST00000252996 4628 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
SH2D4AQ9H788 LMNB1-202ENST00000395354 1572 ntTSL 1 (best) BASIC22.18■■□□□ 1.14
SH2D4AQ9H788 PPM1L-204ENST00000497343 1589 ntTSL 2 BASIC22.18■■□□□ 1.14
SH2D4AQ9H788 ART1-201ENST00000250693 1312 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
SH2D4AQ9H788 PTGDS-202ENST00000371625 807 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
SH2D4AQ9H788 SGO1-208ENST00000437051 1187 ntAPPRIS ALT2 TSL 1 (best) BASIC22.18■■□□□ 1.14
SH2D4AQ9H788 TMA7-201ENST00000438607 561 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
SH2D4AQ9H788 AC004540.1-201ENST00000439120 891 ntTSL 2 BASIC22.18■■□□□ 1.14
SH2D4AQ9H788 AP006284.1-202ENST00000527113 527 ntTSL 4 BASIC22.18■■□□□ 1.14
SH2D4AQ9H788 ETFA-216ENST00000560726 942 ntTSL 3 BASIC22.18■■□□□ 1.14
SH2D4AQ9H788 NT5C-210ENST00000582160 860 ntTSL 2 BASIC22.18■■□□□ 1.14
SH2D4AQ9H788 MIR4674-201ENST00000582457 87 ntBASIC22.18■■□□□ 1.14
SH2D4AQ9H788 AL121956.5-201ENST00000625261 221 ntBASIC22.18■■□□□ 1.14
SH2D4AQ9H788 AL358472.4-201ENST00000633140 710 ntBASIC22.18■■□□□ 1.14
SH2D4AQ9H788 CNTNAP3B-202ENST00000341990 2666 ntTSL 2 BASIC22.18■■□□□ 1.14
SH2D4AQ9H788 ZNF276-208ENST00000568064 2203 ntTSL 5 BASIC22.18■■□□□ 1.14
SH2D4AQ9H788 B4GALT2-201ENST00000309519 2004 ntTSL 2 BASIC22.18■■□□□ 1.14
SH2D4AQ9H788 BEST2-201ENST00000042931 1908 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
SH2D4AQ9H788 ABCC5-204ENST00000392579 1848 ntTSL 1 (best) BASIC22.17■■□□□ 1.14
SH2D4AQ9H788 NCK2-205ENST00000451463 1795 ntTSL 2 BASIC22.17■■□□□ 1.14
SH2D4AQ9H788 EZH2-201ENST00000320356 2639 ntAPPRIS P4 TSL 1 (best) BASIC22.17■■□□□ 1.14
SH2D4AQ9H788 AC005906.2-207ENST00000639005 1580 ntTSL 5 BASIC22.17■■□□□ 1.14
SH2D4AQ9H788 CYP2A7-201ENST00000291764 2128 ntTSL 5 BASIC22.17■■□□□ 1.14
SH2D4AQ9H788 ZNF32-201ENST00000374433 1137 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
SH2D4AQ9H788 AL359075.1-203ENST00000462729 1002 ntBASIC22.17■■□□□ 1.14
SH2D4AQ9H788 AP000777.3-201ENST00000538705 491 ntTSL 3 BASIC22.17■■□□□ 1.14
SH2D4AQ9H788 C10orf142-201ENST00000619243 1110 ntAPPRIS P2 TSL 2 BASIC22.17■■□□□ 1.14
SH2D4AQ9H788 LZTS3-201ENST00000329152 5257 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
SH2D4AQ9H788 WEE1-202ENST00000450114 2799 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
SH2D4AQ9H788 PFDN6-206ENST00000463584 1915 ntTSL 3 BASIC22.17■■□□□ 1.14
SH2D4AQ9H788 SPG7-202ENST00000341316 2288 ntTSL 1 (best) BASIC22.17■■□□□ 1.14
SH2D4AQ9H788 ZIM2-208ENST00000629319 2253 ntAPPRIS P1 TSL 5 BASIC22.17■■□□□ 1.14
SH2D4AQ9H788 LSM11-201ENST00000286307 6584 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
SH2D4AQ9H788 GAS2L1P1-201ENST00000420145 1480 ntBASIC22.16■■□□□ 1.14
SH2D4AQ9H788 MARK2-204ENST00000402010 4728 ntAPPRIS ALT2 TSL 1 (best) BASIC22.16■■□□□ 1.14
SH2D4AQ9H788 AC107959.1-202ENST00000502083 1945 ntTSL 1 (best) BASIC22.16■■□□□ 1.14
SH2D4AQ9H788 HMBS-221ENST00000544387 1351 ntTSL 2 BASIC22.16■■□□□ 1.14
SH2D4AQ9H788 SUMF2-201ENST00000275607 1894 ntTSL 1 (best) BASIC22.16■■□□□ 1.14
SH2D4AQ9H788 SYTL1-210ENST00000616558 1878 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
SH2D4AQ9H788 LY6E-203ENST00000517503 1335 ntAPPRIS ALT2 TSL 3 BASIC22.16■■□□□ 1.14
SH2D4AQ9H788 USP21-203ENST00000368002 2342 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
SH2D4AQ9H788 TYMSOS-201ENST00000323813 844 ntTSL 1 (best) BASIC22.16■■□□□ 1.14
SH2D4AQ9H788 LCE4A-202ENST00000368777 672 ntAPPRIS P1 TSL 2 BASIC22.16■■□□□ 1.14
SH2D4AQ9H788 AL671277.2-201ENST00000458060 996 ntBASIC22.16■■□□□ 1.14
SH2D4AQ9H788 TMEM218-206ENST00000527766 812 ntAPPRIS P1 TSL 3 BASIC22.16■■□□□ 1.14
SH2D4AQ9H788 DUX4-205ENST00000570263 768 ntAPPRIS ALT2 TSL 1 (best) BASIC22.16■■□□□ 1.14
SH2D4AQ9H788 BCL2L12-208ENST00000600947 633 ntTSL 1 (best) BASIC22.16■■□□□ 1.14
SH2D4AQ9H788 C1QTNF8-202ENST00000621771 897 ntTSL 5 BASIC22.16■■□□□ 1.14
SH2D4AQ9H788 RIIAD1-201ENST00000326413 1772 ntTSL 2 BASIC22.16■■□□□ 1.14
SH2D4AQ9H788 SEC11C-202ENST00000509791 2054 ntTSL 1 (best) BASIC22.16■■□□□ 1.14
SH2D4AQ9H788 ME2-218ENST00000640965 2476 ntTSL 5 BASIC22.16■■□□□ 1.14
SH2D4AQ9H788 DMPK-203ENST00000354227 1982 ntTSL 2 BASIC22.16■■□□□ 1.14
SH2D4AQ9H788 GABRD-201ENST00000378585 1961 ntAPPRIS P2 TSL 1 (best) BASIC22.16■■□□□ 1.14
SH2D4AQ9H788 SBK1-201ENST00000341901 4992 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
SH2D4AQ9H788 VPS53-201ENST00000291074 2656 ntTSL 1 (best) BASIC22.15■■□□□ 1.14
SH2D4AQ9H788 CHST8-203ENST00000438847 2133 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
SH2D4AQ9H788 MSLN-205ENST00000563941 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC22.15■■□□□ 1.14
SH2D4AQ9H788 DOC2A-201ENST00000350119 2071 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
SH2D4AQ9H788 CDC42EP2-201ENST00000279249 2023 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
SH2D4AQ9H788 C7orf43-206ENST00000456769 2046 ntTSL 2 BASIC22.15■■□□□ 1.14
SH2D4AQ9H788 EFHC1-206ENST00000635760 2030 ntTSL 5 BASIC22.15■■□□□ 1.14
SH2D4AQ9H788 GGT1-205ENST00000403838 1033 ntTSL 1 (best) BASIC22.15■■□□□ 1.14
SH2D4AQ9H788 AF250324.1-201ENST00000506276 703 ntTSL 3 BASIC22.15■■□□□ 1.14
SH2D4AQ9H788 C5orf49-202ENST00000509627 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC22.15■■□□□ 1.14
SH2D4AQ9H788 ELAVL1-202ENST00000593807 856 ntTSL 3 BASIC22.15■■□□□ 1.14
SH2D4AQ9H788 CR769767.2-201ENST00000622735 460 ntBASIC22.15■■□□□ 1.14
SH2D4AQ9H788 MMP28-201ENST00000605424 1928 ntAPPRIS P3 TSL 1 (best) BASIC22.15■■□□□ 1.14
SH2D4AQ9H788 AR-204ENST00000504326 3615 ntTSL 1 (best) BASIC22.15■■□□□ 1.14
SH2D4AQ9H788 TPCN2-208ENST00000637342 2856 ntTSL 5 BASIC22.15■■□□□ 1.14
SH2D4AQ9H788 MRM3-201ENST00000304478 1809 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
SH2D4AQ9H788 AFG3L1P-217ENST00000557444 2447 ntBASIC22.15■■□□□ 1.14
SH2D4AQ9H788 TMSB4X-203ENST00000380636 1702 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.14
SH2D4AQ9H788 PROB1-201ENST00000434752 5122 ntAPPRIS P1 BASIC22.14■■□□□ 1.14
SH2D4AQ9H788 SRCIN1-213ENST00000617146 7058 ntAPPRIS P2 TSL 1 (best) BASIC22.14■■□□□ 1.14
SH2D4AQ9H788 PQLC2-201ENST00000375153 2153 ntAPPRIS P1 TSL 2 BASIC22.14■■□□□ 1.13
SH2D4AQ9H788 TCP11-204ENST00000373979 1882 ntAPPRIS P3 TSL 5 BASIC22.14■■□□□ 1.13
SH2D4AQ9H788 GAD2-202ENST00000376248 680 ntTSL 5 BASIC22.14■■□□□ 1.13
SH2D4AQ9H788 ST6GALNAC4P1-201ENST00000435385 499 ntBASIC22.14■■□□□ 1.13
SH2D4AQ9H788 CENPS-CORT-205ENST00000602787 571 ntAPPRIS P1 TSL 3 BASIC22.14■■□□□ 1.13
SH2D4AQ9H788 FBXL22-204ENST00000638704 729 ntAPPRIS ALT2 TSL 2 BASIC22.14■■□□□ 1.13
SH2D4AQ9H788 AL772307.1-201ENST00000639363 1066 ntTSL 2 BASIC22.14■■□□□ 1.13
SH2D4AQ9H788 AP000550.4-202ENST00000639755 178 ntBASIC22.14■■□□□ 1.13
SH2D4AQ9H788 AC064853.5-201ENST00000641976 258 ntAPPRIS P1 BASIC22.14■■□□□ 1.13
Retrieved 100 of 98,524 protein–RNA pairs in 25.7 ms