Protein–RNA interactions for Protein: Q9H444

CHMP4B, Charged multivesicular body protein 4b, humanhuman

Known RBP Predictions only

Length 224 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4BQ9H444 RCC2P6-201ENST00000526625 1557 ntBASIC24.01■■□□□ 1.43
CHMP4BQ9H444 HP1BP3-202ENST00000375000 928 ntTSL 1 (best) BASIC24.01■■□□□ 1.43
CHMP4BQ9H444 CHAC1-203ENST00000487220 853 ntTSL 3 BASIC24.01■■□□□ 1.43
CHMP4BQ9H444 KDM2B-217ENST00000543852 1188 ntTSL 5 BASIC24.01■■□□□ 1.43
CHMP4BQ9H444 FLT3LG-211ENST00000600429 984 ntAPPRIS P1 TSL 1 (best) BASIC24.01■■□□□ 1.43
CHMP4BQ9H444 AP001412.1-201ENST00000608405 714 ntBASIC24.01■■□□□ 1.43
CHMP4BQ9H444 AC083906.6-201ENST00000641366 219 ntBASIC24.01■■□□□ 1.43
CHMP4BQ9H444 NOP14-AS1-202ENST00000505731 1999 ntTSL 2 BASIC24.01■■□□□ 1.43
CHMP4BQ9H444 STRN4-202ENST00000391910 3628 ntAPPRIS ALT1 TSL 5 BASIC24.01■■□□□ 1.43
CHMP4BQ9H444 TRMT2A-201ENST00000252136 2964 ntAPPRIS P3 TSL 1 (best) BASIC24.01■■□□□ 1.43
CHMP4BQ9H444 HOXD12-202ENST00000406506 1318 ntAPPRIS P1 TSL 3 BASIC24.01■■□□□ 1.43
CHMP4BQ9H444 P2RY2-201ENST00000311131 2660 ntAPPRIS P1 TSL 1 (best) BASIC24.01■■□□□ 1.43
CHMP4BQ9H444 KCNQ5-203ENST00000355635 6623 ntAPPRIS ALT1 TSL 5 BASIC24.01■■□□□ 1.43
CHMP4BQ9H444 KIF22-201ENST00000160827 2113 ntAPPRIS P1 TSL 1 (best) BASIC24.01■■□□□ 1.43
CHMP4BQ9H444 WISP2-201ENST00000190983 1403 ntAPPRIS P1 TSL 1 (best) BASIC24.01■■□□□ 1.43
CHMP4BQ9H444 CD177-203ENST00000618265 2222 ntAPPRIS P1 TSL 1 (best) BASIC24■■□□□ 1.43
CHMP4BQ9H444 CEP55-201ENST00000371485 2638 ntAPPRIS P1 TSL 1 (best) BASIC24■■□□□ 1.43
CHMP4BQ9H444 SRSF2-202ENST00000359995 1927 ntAPPRIS P1 TSL 1 (best) BASIC24■■□□□ 1.43
CHMP4BQ9H444 CBSL-210ENST00000624934 1992 ntTSL 5 BASIC24■■□□□ 1.43
CHMP4BQ9H444 MRPL15-201ENST00000260102 1147 ntAPPRIS P1 TSL 1 (best) BASIC24■■□□□ 1.43
CHMP4BQ9H444 TLCD1-202ENST00000394933 784 ntTSL 2 BASIC24■■□□□ 1.43
CHMP4BQ9H444 HOXA9-202ENST00000396345 797 ntTSL 2 BASIC24■■□□□ 1.43
CHMP4BQ9H444 ROPN1L-202ENST00000503804 1291 ntAPPRIS P1 TSL 2 BASIC24■■□□□ 1.43
CHMP4BQ9H444 CNOT8-224ENST00000523698 862 ntTSL 2 BASIC24■■□□□ 1.43
CHMP4BQ9H444 TK2-204ENST00000525974 1178 ntTSL 2 BASIC24■■□□□ 1.43
CHMP4BQ9H444 TMEM72-203ENST00000544540 1018 ntTSL 1 (best) BASIC24■■□□□ 1.43
CHMP4BQ9H444 RORA-204ENST00000449337 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC24■■□□□ 1.43
CHMP4BQ9H444 SLC39A4-201ENST00000276833 2297 ntTSL 2 BASIC24■■□□□ 1.43
CHMP4BQ9H444 ATXN7L2-202ENST00000369870 2318 ntAPPRIS P1 TSL 1 (best) BASIC24■■□□□ 1.43
CHMP4BQ9H444 CROCCP3-202ENST00000420820 1947 ntBASIC24■■□□□ 1.43
CHMP4BQ9H444 TMC5-203ENST00000396229 4917 ntAPPRIS ALT2 TSL 5 BASIC24■■□□□ 1.43
CHMP4BQ9H444 UBE2E3-209ENST00000602710 1556 ntAPPRIS P1 TSL 1 (best) BASIC23.99■■□□□ 1.43
CHMP4BQ9H444 USP25-204ENST00000400183 5341 ntTSL 1 (best) BASIC23.99■■□□□ 1.43
CHMP4BQ9H444 ABHD14B-202ENST00000361143 1636 ntAPPRIS P1 TSL 1 (best) BASIC23.99■■□□□ 1.43
CHMP4BQ9H444 KRT13-202ENST00000336861 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC23.99■■□□□ 1.43
CHMP4BQ9H444 ACTR3B-203ENST00000397282 1692 ntTSL 2 BASIC23.99■■□□□ 1.43
CHMP4BQ9H444 MTSS1-203ENST00000431961 1711 ntTSL 1 (best) BASIC23.99■■□□□ 1.43
CHMP4BQ9H444 ISM2-207ENST00000493585 1739 ntTSL 1 (best) BASIC23.99■■□□□ 1.43
CHMP4BQ9H444 SEPT9-246ENST00000592951 1793 ntAPPRIS ALT2 TSL 2 BASIC23.99■■□□□ 1.43
CHMP4BQ9H444 GDPD1-201ENST00000284116 1821 ntAPPRIS P1 TSL 1 (best) BASIC23.99■■□□□ 1.43
CHMP4BQ9H444 COX7A1-201ENST00000292907 762 ntAPPRIS P1 TSL 1 (best) BASIC23.99■■□□□ 1.43
CHMP4BQ9H444 PRORSD1P-201ENST00000295112 541 ntBASIC23.99■■□□□ 1.43
CHMP4BQ9H444 SLC35A2-202ENST00000376512 903 ntTSL 2 BASIC23.99■■□□□ 1.43
CHMP4BQ9H444 SERTAD4-AS1-201ENST00000437764 726 ntTSL 1 (best) BASIC23.99■■□□□ 1.43
CHMP4BQ9H444 PRORSD1P-203ENST00000579162 626 ntTSL 5 BASIC23.99■■□□□ 1.43
CHMP4BQ9H444 AC011944.1-201ENST00000316148 1900 ntTSL 2 BASIC23.99■■□□□ 1.43
CHMP4BQ9H444 KRT8P11-201ENST00000409686 1436 ntBASIC23.99■■□□□ 1.43
CHMP4BQ9H444 MYC-205ENST00000524013 2150 ntAPPRIS ALT1 TSL 1 (best) BASIC23.99■■□□□ 1.43
CHMP4BQ9H444 TMEM106C-202ENST00000429772 1515 ntAPPRIS P1 TSL 2 BASIC23.99■■□□□ 1.43
CHMP4BQ9H444 UBE2Z-201ENST00000360943 3122 ntAPPRIS P1 TSL 1 (best) BASIC23.99■■□□□ 1.43
CHMP4BQ9H444 RFC2-213ENST00000621097 1635 ntTSL 5 BASIC23.99■■□□□ 1.43
CHMP4BQ9H444 ORAI2-204ENST00000473939 2493 ntAPPRIS P1 TSL 1 (best) BASIC23.99■■□□□ 1.43
CHMP4BQ9H444 PTPA-204ENST00000355007 2515 ntTSL 5 BASIC23.99■■□□□ 1.43
CHMP4BQ9H444 QKI-203ENST00000361752 9463 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
CHMP4BQ9H444 WNT6-201ENST00000233948 1703 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
CHMP4BQ9H444 GRK2-201ENST00000308595 3466 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
CHMP4BQ9H444 PTRH1-204ENST00000419060 2692 ntAPPRIS P1 TSL 2 BASIC23.98■■□□□ 1.43
CHMP4BQ9H444 OSTM1-201ENST00000193322 4467 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
CHMP4BQ9H444 KCNH2-202ENST00000330883 3267 ntTSL 1 (best) BASIC23.98■■□□□ 1.43
CHMP4BQ9H444 NFATC4-220ENST00000555393 2235 ntTSL 1 (best) BASIC23.98■■□□□ 1.43
CHMP4BQ9H444 RELB-201ENST00000221452 2294 ntAPPRIS P2 TSL 1 (best) BASIC23.98■■□□□ 1.43
CHMP4BQ9H444 FPGS-203ENST00000373247 2279 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
CHMP4BQ9H444 NDOR1-203ENST00000427047 2315 ntTSL 2 BASIC23.98■■□□□ 1.43
CHMP4BQ9H444 AC093627.4-201ENST00000484550 5008 ntTSL 2 BASIC23.98■■□□□ 1.43
CHMP4BQ9H444 HAS3-201ENST00000219322 1163 ntTSL 1 (best) BASIC23.98■■□□□ 1.43
CHMP4BQ9H444 NT5C1A-201ENST00000235628 1107 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
CHMP4BQ9H444 VSIG2-202ENST00000403470 1191 ntTSL 2 BASIC23.98■■□□□ 1.43
CHMP4BQ9H444 AC091390.4-202ENST00000476426 537 ntBASIC23.98■■□□□ 1.43
CHMP4BQ9H444 ZNF667-AS1-206ENST00000591797 535 ntTSL 5 BASIC23.98■■□□□ 1.43
CHMP4BQ9H444 AC130371.2-201ENST00000619443 611 ntBASIC23.98■■□□□ 1.43
CHMP4BQ9H444 NTAN1-211ENST00000622833 1049 ntTSL 2 BASIC23.98■■□□□ 1.43
CHMP4BQ9H444 NTAN1-212ENST00000624579 1115 ntTSL 2 BASIC23.98■■□□□ 1.43
CHMP4BQ9H444 AC004706.3-201ENST00000634558 1009 ntTSL 5 BASIC23.98■■□□□ 1.43
CHMP4BQ9H444 ABBA01031674.1-201ENST00000635145 728 ntBASIC23.98■■□□□ 1.43
CHMP4BQ9H444 NUBP2-201ENST00000262302 1413 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
CHMP4BQ9H444 PTGER3-209ENST00000460330 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC23.98■■□□□ 1.43
CHMP4BQ9H444 RPP25-201ENST00000322177 3049 ntAPPRIS P1 BASIC23.98■■□□□ 1.43
CHMP4BQ9H444 PCCB-216ENST00000483687 1727 ntTSL 3 BASIC23.98■■□□□ 1.43
CHMP4BQ9H444 Z98044.1-201ENST00000632503 1764 ntBASIC23.98■■□□□ 1.43
CHMP4BQ9H444 AL138781.2-201ENST00000617896 1843 ntBASIC23.98■■□□□ 1.43
CHMP4BQ9H444 SDCBP-204ENST00000447182 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC23.98■■□□□ 1.43
CHMP4BQ9H444 ARRDC2-201ENST00000222250 2503 ntAPPRIS P1 TSL 1 (best) BASIC23.98■■□□□ 1.43
CHMP4BQ9H444 SHF-201ENST00000290894 2500 ntAPPRIS P3 TSL 2 BASIC23.98■■□□□ 1.43
CHMP4BQ9H444 EMX2-201ENST00000442245 2710 ntTSL 2 BASIC23.97■■□□□ 1.43
CHMP4BQ9H444 AC138696.1-201ENST00000522452 2897 ntAPPRIS P1 TSL 1 (best) BASIC23.97■■□□□ 1.43
CHMP4BQ9H444 FBLN1-201ENST00000262722 2251 ntTSL 1 (best) BASIC23.97■■□□□ 1.43
CHMP4BQ9H444 HLA-DRB1-201ENST00000360004 1229 ntAPPRIS P1 BASIC23.97■■□□□ 1.43
CHMP4BQ9H444 SIGLEC14-201ENST00000360844 2035 ntAPPRIS P1 TSL 1 (best) BASIC23.97■■□□□ 1.43
CHMP4BQ9H444 RAMP1-204ENST00000409726 734 ntTSL 3 BASIC23.97■■□□□ 1.43
CHMP4BQ9H444 TMEM8B-204ENST00000439587 2150 ntTSL 1 (best) BASIC23.97■■□□□ 1.43
CHMP4BQ9H444 KCNIP4-206ENST00000447367 1641 ntTSL 5 BASIC23.97■■□□□ 1.43
CHMP4BQ9H444 UBE2K-204ENST00000503368 891 ntTSL 1 (best) BASIC23.97■■□□□ 1.43
CHMP4BQ9H444 DLEU7-203ENST00000504404 1122 ntAPPRIS ALT2 TSL 1 (best) BASIC23.97■■□□□ 1.43
CHMP4BQ9H444 CERNA3-201ENST00000521403 557 ntTSL 3 BASIC23.97■■□□□ 1.43
CHMP4BQ9H444 HDAC11-221ENST00000522202 1559 ntAPPRIS ALT2 TSL 2 BASIC23.97■■□□□ 1.43
CHMP4BQ9H444 CTBP2-214ENST00000531469 1918 ntAPPRIS P1 TSL 2 BASIC23.97■■□□□ 1.43
CHMP4BQ9H444 GNS-208ENST00000543646 2164 ntAPPRIS ALT2 TSL 2 BASIC23.97■■□□□ 1.43
CHMP4BQ9H444 AC027682.2-201ENST00000563083 336 ntTSL 5 BASIC23.97■■□□□ 1.43
CHMP4BQ9H444 FSCN1P1-201ENST00000568912 1481 ntBASIC23.97■■□□□ 1.43
CHMP4BQ9H444 AC087498.1-201ENST00000572493 945 ntAPPRIS P1 BASIC23.97■■□□□ 1.43
Retrieved 100 of 98,524 protein–RNA pairs in 21.4 ms