Protein–RNA interactions for Protein: Q9H0E7

USP44, Ubiquitin carboxyl-terminal hydrolase 44, humanhuman

Predictions only

Length 712 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP44Q9H0E7 GPR142-201ENST00000335666 1437 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
USP44Q9H0E7 CAMKK1-202ENST00000348335 3563 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
USP44Q9H0E7 TERF1P1-201ENST00000311003 1181 ntBASIC23.78■■□□□ 1.4
USP44Q9H0E7 HES7-201ENST00000317814 678 ntAPPRIS P3 TSL 1 (best) BASIC23.78■■□□□ 1.4
USP44Q9H0E7 ICAM4-201ENST00000340992 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC23.78■■□□□ 1.4
USP44Q9H0E7 H2AFB2-201ENST00000354514 348 ntAPPRIS P1 BASIC23.78■■□□□ 1.4
USP44Q9H0E7 MCF2L-207ENST00000397024 490 ntTSL 5 BASIC23.78■■□□□ 1.4
USP44Q9H0E7 AC008105.2-201ENST00000420431 579 ntTSL 4 BASIC23.78■■□□□ 1.4
USP44Q9H0E7 DCTN3-209ENST00000477738 713 ntTSL 3 BASIC23.78■■□□□ 1.4
USP44Q9H0E7 AZIN1-AS1-215ENST00000522939 644 ntTSL 2 BASIC23.78■■□□□ 1.4
USP44Q9H0E7 IGHMBP2-205ENST00000539224 785 ntTSL 3 BASIC23.78■■□□□ 1.4
USP44Q9H0E7 RPRM-201ENST00000325926 1471 ntAPPRIS P1 BASIC23.78■■□□□ 1.4
USP44Q9H0E7 STIM2-204ENST00000467087 5154 ntAPPRIS ALT2 TSL 1 (best) BASIC23.78■■□□□ 1.4
USP44Q9H0E7 CDX1-202ENST00000616154 1343 ntTSL 1 (best) BASIC23.78■■□□□ 1.4
USP44Q9H0E7 TMEM110-MUSTN1-202ENST00000504329 1405 ntAPPRIS P1 TSL 5 BASIC23.77■■□□□ 1.4
USP44Q9H0E7 CNEP1R1-203ENST00000458059 2965 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
USP44Q9H0E7 PDZD3-203ENST00000525131 1882 ntTSL 2 BASIC23.77■■□□□ 1.4
USP44Q9H0E7 KMT5C-201ENST00000255613 2308 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
USP44Q9H0E7 PFKFB3-219ENST00000640683 2311 ntTSL 5 BASIC23.77■■□□□ 1.4
USP44Q9H0E7 PARD3-202ENST00000346874 5894 ntAPPRIS ALT2 TSL 1 (best) BASIC23.77■■□□□ 1.4
USP44Q9H0E7 PARD3-203ENST00000350537 5867 ntAPPRIS ALT2 TSL 1 (best) BASIC23.77■■□□□ 1.4
USP44Q9H0E7 HOXB9-201ENST00000311177 2581 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
USP44Q9H0E7 RPS6KB1-204ENST00000443572 1913 ntTSL 2 BASIC23.77■■□□□ 1.4
USP44Q9H0E7 AL691447.2-201ENST00000454869 2162 ntTSL 2 BASIC23.77■■□□□ 1.4
USP44Q9H0E7 SAMD11-213ENST00000618181 2179 ntAPPRIS ALT2 TSL 5 BASIC23.77■■□□□ 1.4
USP44Q9H0E7 PRRT1-202ENST00000375150 1726 ntTSL 1 (best) BASIC23.77■■□□□ 1.4
USP44Q9H0E7 TMEM234-201ENST00000309777 1082 ntAPPRIS P1 TSL 1 (best) BASIC23.77■■□□□ 1.4
USP44Q9H0E7 PNMA8A-203ENST00000602246 572 ntAPPRIS ALT2 TSL 4 BASIC23.77■■□□□ 1.4
USP44Q9H0E7 SUSD3-205ENST00000617293 1076 ntAPPRIS ALT2 TSL 3 BASIC23.77■■□□□ 1.4
USP44Q9H0E7 NISCH-201ENST00000345716 5238 ntAPPRIS P3 TSL 1 (best) BASIC23.77■■□□□ 1.4
USP44Q9H0E7 ZNF281-202ENST00000367352 2933 ntAPPRIS ALT2 TSL 2 BASIC23.77■■□□□ 1.39
USP44Q9H0E7 FCMR-202ENST00000442471 1441 ntTSL 2 BASIC23.76■■□□□ 1.39
USP44Q9H0E7 FBLN1-201ENST00000262722 2251 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
USP44Q9H0E7 INSM1-201ENST00000310227 2829 ntAPPRIS P1 BASIC23.76■■□□□ 1.39
USP44Q9H0E7 ASMTL-201ENST00000381317 2027 ntAPPRIS P3 TSL 1 (best) BASIC23.76■■□□□ 1.39
USP44Q9H0E7 MAFF-202ENST00000407965 2325 ntAPPRIS P1 TSL 2 BASIC23.76■■□□□ 1.39
USP44Q9H0E7 TMPRSS5-209ENST00000544634 1524 ntTSL 2 BASIC23.76■■□□□ 1.39
USP44Q9H0E7 HMGA1P5-201ENST00000412453 271 ntBASIC23.76■■□□□ 1.39
USP44Q9H0E7 AL451069.1-201ENST00000455414 634 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
USP44Q9H0E7 C5orf49-202ENST00000509627 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC23.76■■□□□ 1.39
USP44Q9H0E7 SCPEP1-216ENST00000631024 444 ntTSL 5 BASIC23.76■■□□□ 1.39
USP44Q9H0E7 PAQR6-201ENST00000292291 1908 ntAPPRIS P3 TSL 1 (best) BASIC23.76■■□□□ 1.39
USP44Q9H0E7 TRIM7-205ENST00000422067 1954 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
USP44Q9H0E7 ANKRD65-201ENST00000427211 1976 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
USP44Q9H0E7 AC073107.1-201ENST00000633579 1962 ntTSL 5 BASIC23.76■■□□□ 1.39
USP44Q9H0E7 GPAT2P1-201ENST00000444924 1672 ntBASIC23.76■■□□□ 1.39
USP44Q9H0E7 MLF2-202ENST00000435120 1379 ntAPPRIS P1 TSL 2 BASIC23.76■■□□□ 1.39
USP44Q9H0E7 PSPC1-206ENST00000619300 2013 ntAPPRIS P1 TSL 5 BASIC23.76■■□□□ 1.39
USP44Q9H0E7 ST3GAL4-203ENST00000392669 1724 ntAPPRIS ALT1 TSL 1 (best) BASIC23.76■■□□□ 1.39
USP44Q9H0E7 UBTF-203ENST00000393606 2683 ntTSL 1 (best) BASIC23.76■■□□□ 1.39
USP44Q9H0E7 PDCD10-201ENST00000392750 2067 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
USP44Q9H0E7 SLC12A2-201ENST00000262461 6885 ntAPPRIS P3 TSL 1 (best) BASIC23.75■■□□□ 1.39
USP44Q9H0E7 PFN2-203ENST00000452853 1780 ntAPPRIS ALT1 TSL 1 (best) BASIC23.75■■□□□ 1.39
USP44Q9H0E7 KRT13-208ENST00000587544 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC23.75■■□□□ 1.39
USP44Q9H0E7 AOC3-204ENST00000591562 2522 ntTSL 2 BASIC23.75■■□□□ 1.39
USP44Q9H0E7 C12orf42-205ENST00000548048 1532 ntAPPRIS ALT2 TSL 5 BASIC23.75■■□□□ 1.39
USP44Q9H0E7 NECTIN3-211ENST00000493615 1876 ntAPPRIS ALT2 TSL 2 BASIC23.75■■□□□ 1.39
USP44Q9H0E7 CD177-203ENST00000618265 2222 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
USP44Q9H0E7 TBXA2R-201ENST00000375190 2608 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
USP44Q9H0E7 ATIC-205ENST00000435675 2275 ntTSL 2 BASIC23.75■■□□□ 1.39
USP44Q9H0E7 NDRG2-227ENST00000554143 1980 ntAPPRIS ALT1 TSL 2 BASIC23.75■■□□□ 1.39
USP44Q9H0E7 TMEM91-210ENST00000542945 1610 ntTSL 2 BASIC23.75■■□□□ 1.39
USP44Q9H0E7 PRDX5-201ENST00000265462 893 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
USP44Q9H0E7 ICAM1-202ENST00000423829 1296 ntTSL 2 BASIC23.75■■□□□ 1.39
USP44Q9H0E7 GXYLT1P6-201ENST00000456472 1187 ntBASIC23.75■■□□□ 1.39
USP44Q9H0E7 DEUP1-206ENST00000530273 410 ntTSL 3 BASIC23.75■■□□□ 1.39
USP44Q9H0E7 AL138966.2-201ENST00000621997 464 ntBASIC23.75■■□□□ 1.39
USP44Q9H0E7 SOCS2-201ENST00000340600 2761 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
USP44Q9H0E7 SLC25A51-202ENST00000377716 1691 ntAPPRIS P1 TSL 3 BASIC23.75■■□□□ 1.39
USP44Q9H0E7 CDC14B-208ENST00000463569 1734 ntAPPRIS ALT2 TSL 5 BASIC23.75■■□□□ 1.39
USP44Q9H0E7 PPHLN1-213ENST00000549190 1777 ntTSL 5 BASIC23.75■■□□□ 1.39
USP44Q9H0E7 PCSK6-217ENST00000618548 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC23.75■■□□□ 1.39
USP44Q9H0E7 PARS2-201ENST00000371279 2347 ntAPPRIS P1 TSL 1 (best) BASIC23.75■■□□□ 1.39
USP44Q9H0E7 ERCC2-203ENST00000391944 2334 ntTSL 1 (best) BASIC23.75■■□□□ 1.39
USP44Q9H0E7 BACE2-201ENST00000328735 2824 ntTSL 1 (best) BASIC23.74■■□□□ 1.39
USP44Q9H0E7 DNAJC28-201ENST00000314399 1625 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
USP44Q9H0E7 LONRF3-202ENST00000371628 2550 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
USP44Q9H0E7 MAPK8IP1-201ENST00000241014 3050 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
USP44Q9H0E7 LRWD1-201ENST00000292616 2215 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
USP44Q9H0E7 MXD3-202ENST00000427908 2269 ntTSL 2 BASIC23.74■■□□□ 1.39
USP44Q9H0E7 BAD-201ENST00000309032 929 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
USP44Q9H0E7 COMMD1-201ENST00000311832 911 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
USP44Q9H0E7 SLC25A48-202ENST00000412661 1148 ntTSL 1 (best) BASIC23.74■■□□□ 1.39
USP44Q9H0E7 SLC25A48-204ENST00000433282 1111 ntAPPRIS P1 TSL 5 BASIC23.74■■□□□ 1.39
USP44Q9H0E7 MVB12A-204ENST00000528515 686 ntTSL 5 BASIC23.74■■□□□ 1.39
USP44Q9H0E7 AC005606.2-201ENST00000564438 614 ntTSL 2 BASIC23.74■■□□□ 1.39
USP44Q9H0E7 ISLR2-204ENST00000453268 2812 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
USP44Q9H0E7 GCOM1-202ENST00000380569 1846 ntAPPRIS P3 TSL 2 BASIC23.74■■□□□ 1.39
USP44Q9H0E7 AC129492.1-201ENST00000399413 1804 ntTSL 1 (best) BASIC23.74■■□□□ 1.39
USP44Q9H0E7 HMBS-221ENST00000544387 1351 ntTSL 2 BASIC23.74■■□□□ 1.39
USP44Q9H0E7 PTPRJ-208ENST00000615445 4773 ntAPPRIS ALT2 TSL 5 BASIC23.74■■□□□ 1.39
USP44Q9H0E7 ACTG1-201ENST00000331925 1994 ntAPPRIS P1 TSL 1 (best) BASIC23.74■■□□□ 1.39
USP44Q9H0E7 AL512353.2-201ENST00000448759 1962 ntBASIC23.74■■□□□ 1.39
USP44Q9H0E7 TRIM73-205ENST00000450434 1425 ntTSL 1 (best) BASIC23.74■■□□□ 1.39
USP44Q9H0E7 PHKG2-202ENST00000424889 1566 ntTSL 2 BASIC23.74■■□□□ 1.39
USP44Q9H0E7 ABHD14B-202ENST00000361143 1636 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
USP44Q9H0E7 SLC27A3-214ENST00000624995 2413 ntAPPRIS P2 TSL 1 (best) BASIC23.73■■□□□ 1.39
USP44Q9H0E7 SLC35A3-224ENST00000640732 1777 ntTSL 5 BASIC23.73■■□□□ 1.39
USP44Q9H0E7 HMCES-201ENST00000383463 2515 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
USP44Q9H0E7 ADORA2A-215ENST00000618076 2630 ntAPPRIS P1 TSL 1 (best) BASIC23.73■■□□□ 1.39
Retrieved 100 of 98,524 protein–RNA pairs in 38.2 ms