Protein–RNA interactions for Protein: Q99942

RNF5, E3 ubiquitin-protein ligase RNF5, humanhuman

Predictions only

Length 180 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF5Q99942 ACTR3B-203ENST00000397282 1692 ntTSL 2 BASIC15.22■□□□□ 0.03
RNF5Q99942 TMEM191C-214ENST00000621561 1337 ntAPPRIS P2 TSL 5 BASIC15.22■□□□□ 0.03
RNF5Q99942 CRMP1-201ENST00000324989 3146 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
RNF5Q99942 AC138430.1-201ENST00000586064 5409 ntTSL 2 BASIC15.22■□□□□ 0.03
RNF5Q99942 THAP7-AS1-203ENST00000452284 2298 ntTSL 2 BASIC15.22■□□□□ 0.03
RNF5Q99942 AC093627.4-201ENST00000484550 5008 ntTSL 2 BASIC15.22■□□□□ 0.03
RNF5Q99942 CDK17-203ENST00000543119 2442 ntTSL 2 BASIC15.22■□□□□ 0.03
RNF5Q99942 KCNQ5-203ENST00000355635 6623 ntAPPRIS ALT1 TSL 5 BASIC15.22■□□□□ 0.03
RNF5Q99942 E4F1-201ENST00000301727 2573 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
RNF5Q99942 HOXB9-201ENST00000311177 2581 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
RNF5Q99942 SEC11C-202ENST00000509791 2054 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
RNF5Q99942 PRSS3-201ENST00000342836 1144 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
RNF5Q99942 AC093620.1-201ENST00000342963 583 ntTSL 3 BASIC15.22■□□□□ 0.03
RNF5Q99942 ABHD17AP1-201ENST00000358206 933 ntBASIC15.22■□□□□ 0.03
RNF5Q99942 AVP-201ENST00000380293 619 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
RNF5Q99942 C7orf50-203ENST00000397100 1264 ntAPPRIS P2 TSL 3 BASIC15.22■□□□□ 0.03
RNF5Q99942 CTNNBIP1-204ENST00000400904 1206 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
RNF5Q99942 SPAG16-207ENST00000432529 1250 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
RNF5Q99942 B3GAT3P1-201ENST00000471720 806 ntBASIC15.22■□□□□ 0.03
RNF5Q99942 AC116562.2-201ENST00000507042 360 ntBASIC15.22■□□□□ 0.03
RNF5Q99942 TESMIN-209ENST00000544963 1235 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
RNF5Q99942 TARBP2-220ENST00000552857 916 ntTSL 5 BASIC15.22■□□□□ 0.03
RNF5Q99942 AP000692.2-201ENST00000608391 879 ntBASIC15.22■□□□□ 0.03
RNF5Q99942 TMEM191A-211ENST00000637163 1067 ntBASIC15.22■□□□□ 0.03
RNF5Q99942 UBL4A-202ENST00000369660 2382 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
RNF5Q99942 FAM99A-201ENST00000382167 1432 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
RNF5Q99942 KRT8P3-201ENST00000519669 1449 ntBASIC15.22■□□□□ 0.03
RNF5Q99942 SLC39A1-209ENST00000537590 2022 ntTSL 2 BASIC15.22■□□□□ 0.03
RNF5Q99942 TBXA2R-201ENST00000375190 2608 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
RNF5Q99942 JAKMIP1-208ENST00000637373 1362 ntTSL 5 BASIC15.22■□□□□ 0.03
RNF5Q99942 CD151-201ENST00000322008 1548 ntAPPRIS P2 TSL 1 (best) BASIC15.22■□□□□ 0.03
RNF5Q99942 FAM131A-204ENST00000418281 1664 ntTSL 5 BASIC15.22■□□□□ 0.03
RNF5Q99942 CPZ-202ENST00000360986 2267 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
RNF5Q99942 PGAP3-206ENST00000579146 2220 ntTSL 2 BASIC15.21■□□□□ 0.03
RNF5Q99942 CERS4-201ENST00000251363 1797 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
RNF5Q99942 GAL3ST1-206ENST00000406955 1635 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
RNF5Q99942 NPAS1-201ENST00000439365 1341 ntTSL 2 BASIC15.21■□□□□ 0.03
RNF5Q99942 WEE1-202ENST00000450114 2799 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
RNF5Q99942 PIK3R1-201ENST00000320694 2625 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
RNF5Q99942 SYNDIG1L-201ENST00000331628 2607 ntAPPRIS P1 TSL 5 BASIC15.21■□□□□ 0.03
RNF5Q99942 PRRT1-202ENST00000375150 1726 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
RNF5Q99942 HOXA13-201ENST00000222753 5030 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
RNF5Q99942 HDAC11-221ENST00000522202 1559 ntAPPRIS ALT2 TSL 2 BASIC15.21■□□□□ 0.03
RNF5Q99942 LIN54-209ENST00000510557 2257 ntTSL 2 BASIC15.21■□□□□ 0.03
RNF5Q99942 LGI3-202ENST00000424267 3114 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
RNF5Q99942 PEX7-202ENST00000367756 680 ntTSL 3 BASIC15.21■□□□□ 0.03
RNF5Q99942 LCE2B-201ENST00000368780 612 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
RNF5Q99942 MIR718-201ENST00000390190 70 ntBASIC15.21■□□□□ 0.03
RNF5Q99942 SMIM19-201ENST00000414154 793 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
RNF5Q99942 FAM197Y1-201ENST00000421178 764 ntBASIC15.21■□□□□ 0.03
RNF5Q99942 LINC01122-201ENST00000422723 675 ntTSL 3 BASIC15.21■□□□□ 0.03
RNF5Q99942 GLYCTK-205ENST00000473032 935 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
RNF5Q99942 CDH18-AS1-201ENST00000513573 424 ntTSL 2 BASIC15.21■□□□□ 0.03
RNF5Q99942 AF131216.3-201ENST00000525867 1099 ntTSL 2 BASIC15.21■□□□□ 0.03
RNF5Q99942 TMEM9B-203ENST00000528117 949 ntTSL 2 BASIC15.21■□□□□ 0.03
RNF5Q99942 TNFRSF1B-204ENST00000536782 557 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
RNF5Q99942 CKBP1-201ENST00000565489 1086 ntBASIC15.21■□□□□ 0.03
RNF5Q99942 TYROBP-209ENST00000589517 415 ntAPPRIS ALT1 TSL 1 (best) BASIC15.21■□□□□ 0.03
RNF5Q99942 ZNF667-AS1-206ENST00000591797 535 ntTSL 5 BASIC15.21■□□□□ 0.03
RNF5Q99942 AL024498.1-202ENST00000606652 480 ntTSL 2 BASIC15.21■□□□□ 0.03
RNF5Q99942 MARK4-211ENST00000622871 1147 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
RNF5Q99942 AC097662.2-201ENST00000641359 267 ntAPPRIS P1 BASIC15.21■□□□□ 0.03
RNF5Q99942 BAALC-203ENST00000309982 2831 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
RNF5Q99942 CBSL-210ENST00000624934 1992 ntTSL 5 BASIC15.21■□□□□ 0.03
RNF5Q99942 HOXB8-201ENST00000239144 1823 ntAPPRIS P2 TSL 2 BASIC15.21■□□□□ 0.03
RNF5Q99942 UMOD-203ENST00000396138 2399 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.03
RNF5Q99942 AC124066.1-201ENST00000581122 1660 ntTSL 5 BASIC15.21■□□□□ 0.03
RNF5Q99942 PSMD8-210ENST00000620216 1538 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
RNF5Q99942 SAMD5-201ENST00000367474 6089 ntAPPRIS P1 TSL 2 BASIC15.21■□□□□ 0.03
RNF5Q99942 MEN1-208ENST00000394374 3155 ntAPPRIS P3 TSL 5 BASIC15.21■□□□□ 0.03
RNF5Q99942 SRSF2-202ENST00000359995 1927 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
RNF5Q99942 LRRC23-207ENST00000433346 1387 ntTSL 5 BASIC15.21■□□□□ 0.02
RNF5Q99942 WNK1-203ENST00000447667 1902 ntTSL 1 (best) BASIC15.21■□□□□ 0.02
RNF5Q99942 CDHR5-201ENST00000349570 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.02
RNF5Q99942 SEPT9-246ENST00000592951 1793 ntAPPRIS ALT2 TSL 2 BASIC15.21■□□□□ 0.02
RNF5Q99942 LINC01819-201ENST00000422351 2156 ntTSL 5 BASIC15.21■□□□□ 0.02
RNF5Q99942 KATNBL1P6-202ENST00000562413 1466 ntBASIC15.2■□□□□ 0.02
RNF5Q99942 PRSS12-201ENST00000296498 4809 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
RNF5Q99942 AC120498.9-201ENST00000339021 3867 ntBASIC15.2■□□□□ 0.02
RNF5Q99942 CAV2-201ENST00000222693 3301 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
RNF5Q99942 TMEM259-209ENST00000592590 2509 ntTSL 5 BASIC15.2■□□□□ 0.02
RNF5Q99942 TCTA-201ENST00000273590 2146 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
RNF5Q99942 CDK18-217ENST00000506784 2143 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
RNF5Q99942 FADS2-209ENST00000521849 1703 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
RNF5Q99942 TXNL1-211ENST00000590954 1339 ntAPPRIS P1 TSL 2 BASIC15.2■□□□□ 0.02
RNF5Q99942 MME-217ENST00000616757 1315 ntTSL 5 BASIC15.2■□□□□ 0.02
RNF5Q99942 DAG1-221ENST00000541308 5676 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
RNF5Q99942 TP53BP2-201ENST00000343537 4651 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
RNF5Q99942 CNEP1R1-203ENST00000458059 2965 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
RNF5Q99942 C16orf59-210ENST00000569496 1911 ntAPPRIS ALT2 TSL 5 BASIC15.2■□□□□ 0.02
RNF5Q99942 CLDND1-203ENST00000394181 2170 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
RNF5Q99942 PRSS36-202ENST00000418068 2446 ntTSL 2 BASIC15.2■□□□□ 0.02
RNF5Q99942 GAMT-201ENST00000252288 1121 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
RNF5Q99942 KIAA1522-201ENST00000294521 878 ntAPPRIS ALT2 TSL 2 BASIC15.2■□□□□ 0.02
RNF5Q99942 SYNE4-202ENST00000340477 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
RNF5Q99942 RXFP4-201ENST00000368318 1240 ntAPPRIS P1 BASIC15.2■□□□□ 0.02
RNF5Q99942 FAM26F-202ENST00000368605 1117 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
RNF5Q99942 C9orf129-201ENST00000375419 1154 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
RNF5Q99942 AC011506.1-201ENST00000474329 610 ntBASIC15.2■□□□□ 0.02
RNF5Q99942 CXCL2-202ENST00000508487 1218 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Retrieved 100 of 98,524 protein–RNA pairs in 30.3 ms