Protein–RNA interactions for Protein: Q99727

TIMP4, Metalloproteinase inhibitor 4, humanhuman

Predictions only

Length 224 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TIMP4Q99727 PQLC2-202ENST00000375155 1805 ntAPPRIS P1 TSL 2 BASIC17.47■□□□□ 0.39
TIMP4Q99727 CFP-201ENST00000247153 1713 ntAPPRIS P2 TSL 5 BASIC17.47■□□□□ 0.39
TIMP4Q99727 SLC25A41-201ENST00000321510 1532 ntAPPRIS P1 TSL 5 BASIC17.47■□□□□ 0.39
TIMP4Q99727 HOXD12-202ENST00000406506 1318 ntAPPRIS P1 TSL 3 BASIC17.47■□□□□ 0.39
TIMP4Q99727 KRT15-203ENST00000393976 2394 ntAPPRIS P1 TSL 5 BASIC17.46■□□□□ 0.39
TIMP4Q99727 LDLRAD4-211ENST00000587757 2171 ntTSL 2 BASIC17.46■□□□□ 0.39
TIMP4Q99727 NR1H2-201ENST00000253727 1998 ntAPPRIS P2 TSL 1 (best) BASIC17.46■□□□□ 0.39
TIMP4Q99727 ACD-202ENST00000393919 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.39
TIMP4Q99727 ANKRD65-201ENST00000427211 1976 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
TIMP4Q99727 FGFR1-214ENST00000447712 5900 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.39
TIMP4Q99727 CCT5-214ENST00000515676 1997 ntTSL 2 BASIC17.46■□□□□ 0.39
TIMP4Q99727 ACTL6A-201ENST00000392662 1899 ntTSL 2 BASIC17.46■□□□□ 0.39
TIMP4Q99727 SSC4D-201ENST00000275560 2801 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
TIMP4Q99727 IFFO1-212ENST00000619571 2724 ntTSL 2 BASIC17.46■□□□□ 0.39
TIMP4Q99727 FGFBP3-201ENST00000311575 2545 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
TIMP4Q99727 RTN4-207ENST00000402434 1456 ntTSL 5 BASIC17.46■□□□□ 0.39
TIMP4Q99727 APIP-201ENST00000395787 1366 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
TIMP4Q99727 NT5C1A-201ENST00000235628 1107 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
TIMP4Q99727 HBA1-201ENST00000320868 577 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
TIMP4Q99727 COX5A-201ENST00000322347 1268 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
TIMP4Q99727 MARC2-202ENST00000366913 2134 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
TIMP4Q99727 RXFP4-201ENST00000368318 1240 ntAPPRIS P1 BASIC17.46■□□□□ 0.39
TIMP4Q99727 GGT6-202ENST00000381550 2145 ntTSL 2 BASIC17.46■□□□□ 0.39
TIMP4Q99727 ATP5S-204ENST00000426751 1171 ntTSL 1 (best) BASIC17.46■□□□□ 0.39
TIMP4Q99727 C20orf166-AS1-202ENST00000436101 761 ntTSL 5 BASIC17.46■□□□□ 0.39
TIMP4Q99727 USP46-AS1-201ENST00000503051 1048 ntTSL 3 BASIC17.46■□□□□ 0.39
TIMP4Q99727 AZIN1-AS1-215ENST00000522939 644 ntTSL 2 BASIC17.46■□□□□ 0.39
TIMP4Q99727 AC008649.1-201ENST00000589557 516 ntTSL 2 BASIC17.46■□□□□ 0.39
TIMP4Q99727 AC100793.2-201ENST00000593139 542 ntTSL 5 BASIC17.46■□□□□ 0.39
TIMP4Q99727 DGCR10-201ENST00000609839 495 ntBASIC17.46■□□□□ 0.39
TIMP4Q99727 CNNM4-201ENST00000377075 4800 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.39
TIMP4Q99727 PLPPR2-208ENST00000591608 2552 ntAPPRIS ALT2 TSL 2 BASIC17.46■□□□□ 0.39
TIMP4Q99727 GIT1-201ENST00000225394 3768 ntAPPRIS P3 TSL 1 (best) BASIC17.46■□□□□ 0.39
TIMP4Q99727 FBRS-202ENST00000356166 5200 ntTSL 5 BASIC17.46■□□□□ 0.39
TIMP4Q99727 CHPF-203ENST00000535926 2634 ntTSL 2 BASIC17.46■□□□□ 0.39
TIMP4Q99727 TRAK2-202ENST00000430254 1436 ntTSL 2 BASIC17.46■□□□□ 0.39
TIMP4Q99727 MTCL1-201ENST00000306329 5718 ntAPPRIS ALT2 TSL 5 BASIC17.46■□□□□ 0.38
TIMP4Q99727 EPOR-201ENST00000222139 2411 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.38
TIMP4Q99727 BIRC7-202ENST00000342412 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC17.46■□□□□ 0.38
TIMP4Q99727 KCNJ12-202ENST00000583088 5425 ntAPPRIS P1 TSL 1 (best) BASIC17.46■□□□□ 0.38
TIMP4Q99727 EFS-201ENST00000216733 3118 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
TIMP4Q99727 GPRIN2-201ENST00000374314 1696 ntAPPRIS P1 BASIC17.45■□□□□ 0.38
TIMP4Q99727 FLVCR1-201ENST00000366971 5939 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
TIMP4Q99727 NBL1-212ENST00000621723 2133 ntAPPRIS P3 TSL 2 BASIC17.45■□□□□ 0.38
TIMP4Q99727 KLHL17-201ENST00000338591 2560 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
TIMP4Q99727 RCC2P6-201ENST00000526625 1557 ntBASIC17.45■□□□□ 0.38
TIMP4Q99727 CYP2D8P-201ENST00000433633 1490 ntBASIC17.45■□□□□ 0.38
TIMP4Q99727 STOML1-209ENST00000564777 1849 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
TIMP4Q99727 ZNF839-202ENST00000442396 2987 ntAPPRIS P3 TSL 5 BASIC17.45■□□□□ 0.38
TIMP4Q99727 MAGED2-203ENST00000375053 2066 ntAPPRIS P2 TSL 1 (best) BASIC17.45■□□□□ 0.38
TIMP4Q99727 BICRA-204ENST00000614245 5697 ntAPPRIS ALT2 TSL 5 BASIC17.45■□□□□ 0.38
TIMP4Q99727 IFI6-201ENST00000339145 822 ntAPPRIS P4 TSL 2 BASIC17.45■□□□□ 0.38
TIMP4Q99727 PTPA-216ENST00000432651 857 ntTSL 2 BASIC17.45■□□□□ 0.38
TIMP4Q99727 CHAC1-203ENST00000487220 853 ntTSL 3 BASIC17.45■□□□□ 0.38
TIMP4Q99727 FAM181A-203ENST00000556222 1162 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
TIMP4Q99727 KAZN-209ENST00000636564 1197 ntTSL 5 BASIC17.45■□□□□ 0.38
TIMP4Q99727 AL590627.2-201ENST00000637510 144 ntTSL 5 BASIC17.45■□□□□ 0.38
TIMP4Q99727 MTX1-202ENST00000368376 1632 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
TIMP4Q99727 L2HGDH-203ENST00000421284 1958 ntAPPRIS P1 TSL 2 BASIC17.45■□□□□ 0.38
TIMP4Q99727 HOXC6-202ENST00000394331 2943 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
TIMP4Q99727 PRKAR1B-212ENST00000544935 2494 ntAPPRIS P1 TSL 5 BASIC17.45■□□□□ 0.38
TIMP4Q99727 NFKBIL1-201ENST00000376145 1401 ntTSL 1 (best) BASIC17.45■□□□□ 0.38
TIMP4Q99727 PTGER3-209ENST00000460330 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC17.45■□□□□ 0.38
TIMP4Q99727 EVX1-202ENST00000496902 2955 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
TIMP4Q99727 KMT2B-201ENST00000420124 8469 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
TIMP4Q99727 TMEM230-206ENST00000379283 1660 ntAPPRIS P1 TSL 3 BASIC17.45■□□□□ 0.38
TIMP4Q99727 PRR14-202ENST00000300835 2198 ntAPPRIS P1 TSL 1 (best) BASIC17.45■□□□□ 0.38
TIMP4Q99727 ADAP1-205ENST00000449296 2093 ntTSL 2 BASIC17.44■□□□□ 0.38
TIMP4Q99727 CHAC1-205ENST00000617961 1498 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
TIMP4Q99727 MAFF-206ENST00000538320 2458 ntAPPRIS P1 TSL 4 BASIC17.44■□□□□ 0.38
TIMP4Q99727 ZNF316-201ENST00000382252 5392 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
TIMP4Q99727 TMTC1-203ENST00000539277 2758 ntAPPRIS P2 TSL 1 (best) BASIC17.44■□□□□ 0.38
TIMP4Q99727 AGPAT5-201ENST00000285518 3685 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
TIMP4Q99727 IMMP2L-202ENST00000405709 1522 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
TIMP4Q99727 CENPA-201ENST00000233505 1299 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
TIMP4Q99727 EMC6-201ENST00000248378 653 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
TIMP4Q99727 DUSP23-203ENST00000368109 729 ntAPPRIS P1 TSL 2 BASIC17.44■□□□□ 0.38
TIMP4Q99727 PSEN1-203ENST00000394157 1249 ntTSL 2 BASIC17.44■□□□□ 0.38
TIMP4Q99727 AL954642.1-201ENST00000428088 538 ntTSL 3 BASIC17.44■□□□□ 0.38
TIMP4Q99727 LMCD1-AS1-204ENST00000446281 932 ntTSL 5 BASIC17.44■□□□□ 0.38
TIMP4Q99727 AC097488.1-201ENST00000507834 756 ntBASIC17.44■□□□□ 0.38
TIMP4Q99727 KRT18P21-201ENST00000515767 1272 ntBASIC17.44■□□□□ 0.38
TIMP4Q99727 AP003501.2-201ENST00000524433 477 ntTSL 4 BASIC17.44■□□□□ 0.38
TIMP4Q99727 TARBP2-220ENST00000552857 916 ntTSL 5 BASIC17.44■□□□□ 0.38
TIMP4Q99727 CRNDE-210ENST00000560912 459 ntTSL 5 BASIC17.44■□□□□ 0.38
TIMP4Q99727 NAPSB-206ENST00000562112 1266 ntBASIC17.44■□□□□ 0.38
TIMP4Q99727 AC145285.6-201ENST00000604632 637 ntBASIC17.44■□□□□ 0.38
TIMP4Q99727 CCDC28A-203ENST00000617445 1240 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
TIMP4Q99727 RPS27A-211ENST00000639844 606 ntTSL 5 BASIC17.44■□□□□ 0.38
TIMP4Q99727 SLC7A10-201ENST00000253188 1946 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
TIMP4Q99727 MLX-201ENST00000246912 2586 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
TIMP4Q99727 FARSA-207ENST00000588025 2057 ntTSL 5 BASIC17.44■□□□□ 0.38
TIMP4Q99727 MAP3K15-201ENST00000338883 4012 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
TIMP4Q99727 TRAPPC5-204ENST00000596148 5498 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
TIMP4Q99727 PVRIG-201ENST00000317271 1583 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
TIMP4Q99727 ACBD4-207ENST00000586346 1579 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
TIMP4Q99727 LUC7L2-210ENST00000619796 2783 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
TIMP4Q99727 NRG2-202ENST00000289422 2923 ntTSL 5 BASIC17.44■□□□□ 0.38
TIMP4Q99727 AC012414.5-201ENST00000564214 1602 ntTSL 5 BASIC17.43■□□□□ 0.38
TIMP4Q99727 PDP1-208ENST00000520728 2554 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 39.2 ms