Protein–RNA interactions for Protein: Q99638

RAD9A, Cell cycle checkpoint control protein RAD9A, humanhuman

Predictions only

Length 391 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAD9AQ99638 MAL-203ENST00000353004 873 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
RAD9AQ99638 HFE2-202ENST00000357836 2123 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
RAD9AQ99638 FAM239B-201ENST00000381106 1099 ntTSL 2 BASIC20.34■□□□□ 0.85
RAD9AQ99638 LINC01770-202ENST00000430109 510 ntTSL 3 BASIC20.34■□□□□ 0.85
RAD9AQ99638 AL445472.1-201ENST00000452532 1007 ntTSL 2 BASIC20.34■□□□□ 0.85
RAD9AQ99638 CIB2-208ENST00000560618 804 ntTSL 2 BASIC20.34■□□□□ 0.85
RAD9AQ99638 AC012615.1-201ENST00000565797 1299 ntBASIC20.34■□□□□ 0.85
RAD9AQ99638 RPL19-204ENST00000579260 1051 ntAPPRIS ALT1 TSL 2 BASIC20.34■□□□□ 0.85
RAD9AQ99638 ANAPC11-217ENST00000579978 575 ntAPPRIS P1 TSL 2 BASIC20.34■□□□□ 0.85
RAD9AQ99638 MIR3917-201ENST00000580971 93 ntBASIC20.34■□□□□ 0.85
RAD9AQ99638 PLAUR-214ENST00000601723 1205 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
RAD9AQ99638 DEF8-228ENST00000610455 816 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
RAD9AQ99638 ISG15-203ENST00000624697 788 ntAPPRIS ALT2 TSL 3 BASIC20.34■□□□□ 0.85
RAD9AQ99638 AC112497.1-201ENST00000624824 639 ntBASIC20.34■□□□□ 0.85
RAD9AQ99638 C1orf43-210ENST00000640799 1287 ntTSL 5 BASIC20.34■□□□□ 0.85
RAD9AQ99638 SNAP91-211ENST00000520213 2168 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
RAD9AQ99638 PTPRM-211ENST00000580170 5941 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
RAD9AQ99638 SH3RF3-201ENST00000309415 5803 ntAPPRIS P1 TSL 5 BASIC20.33■□□□□ 0.85
RAD9AQ99638 MAFG-AS1-201ENST00000582106 1895 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
RAD9AQ99638 MAG-201ENST00000361922 2426 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.85
RAD9AQ99638 AC026412.3-201ENST00000605200 1661 ntTSL 5 BASIC20.33■□□□□ 0.85
RAD9AQ99638 LINC01237-203ENST00000430555 843 ntTSL 4 BASIC20.33■□□□□ 0.85
RAD9AQ99638 AC079781.3-201ENST00000449110 356 ntBASIC20.33■□□□□ 0.85
RAD9AQ99638 KRT18P31-201ENST00000506277 1292 ntBASIC20.33■□□□□ 0.85
RAD9AQ99638 FOSL1P1-201ENST00000511041 816 ntBASIC20.33■□□□□ 0.85
RAD9AQ99638 RPL26L1-205ENST00000519974 695 ntAPPRIS P1 TSL 3 BASIC20.33■□□□□ 0.85
RAD9AQ99638 VEGFA-222ENST00000520948 1199 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
RAD9AQ99638 LAT-211ENST00000566177 786 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.85
RAD9AQ99638 TMEM220-AS1-201ENST00000579114 575 ntTSL 4 BASIC20.33■□□□□ 0.85
RAD9AQ99638 DNASE1L2-203ENST00000564065 2194 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
RAD9AQ99638 WNT5B-203ENST00000537031 1437 ntAPPRIS P1 TSL 2 BASIC20.33■□□□□ 0.84
RAD9AQ99638 TRMT2A-204ENST00000439169 2473 ntTSL 5 BASIC20.33■□□□□ 0.84
RAD9AQ99638 GAS2L1-207ENST00000611648 2482 ntAPPRIS P1 TSL 2 BASIC20.33■□□□□ 0.84
RAD9AQ99638 SRP9-203ENST00000366839 1596 ntTSL 1 (best) BASIC20.33■□□□□ 0.84
RAD9AQ99638 MSL1-204ENST00000578648 2267 ntTSL 5 BASIC20.33■□□□□ 0.84
RAD9AQ99638 ICAM5-201ENST00000221980 3000 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
RAD9AQ99638 GSN-204ENST00000373818 2657 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
RAD9AQ99638 MYOZ3-203ENST00000517768 1451 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
RAD9AQ99638 AC148477.3-202ENST00000376617 1766 ntTSL 2 BASIC20.32■□□□□ 0.84
RAD9AQ99638 TMEM42-201ENST00000302392 1026 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
RAD9AQ99638 RPL36-202ENST00000394580 556 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
RAD9AQ99638 GNB1L-203ENST00000405009 1076 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
RAD9AQ99638 AKR7L-201ENST00000420396 1240 ntAPPRIS ALT2 TSL 5 BASIC20.32■□□□□ 0.84
RAD9AQ99638 LINC00454-206ENST00000609861 841 ntTSL 5 BASIC20.32■□□□□ 0.84
RAD9AQ99638 C10orf142-202ENST00000623589 1010 ntAPPRIS ALT2 TSL 5 BASIC20.32■□□□□ 0.84
RAD9AQ99638 CEACAM3-208ENST00000630848 1110 ntAPPRIS ALT2 TSL 5 BASIC20.32■□□□□ 0.84
RAD9AQ99638 CLN3-259ENST00000637551 1083 ntTSL 5 BASIC20.32■□□□□ 0.84
RAD9AQ99638 IFNL4-203ENST00000634680 1421 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
RAD9AQ99638 ME3-212ENST00000543262 2311 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
RAD9AQ99638 CLEC4G-201ENST00000328853 1360 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
RAD9AQ99638 AKR1A1-214ENST00000621846 1360 ntAPPRIS P1 TSL 5 BASIC20.32■□□□□ 0.84
RAD9AQ99638 NCKAP1-201ENST00000360982 4989 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
RAD9AQ99638 EPS8L1-203ENST00000540810 2360 ntTSL 2 BASIC20.31■□□□□ 0.84
RAD9AQ99638 CACNB2-203ENST00000352115 1911 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
RAD9AQ99638 CENPT-215ENST00000564817 1638 ntAPPRIS ALT2 TSL 5 BASIC20.31■□□□□ 0.84
RAD9AQ99638 OSBPL10-204ENST00000438237 2624 ntAPPRIS ALT2 TSL 2 BASIC20.31■□□□□ 0.84
RAD9AQ99638 AC096719.1-201ENST00000510705 1874 ntTSL 5 BASIC20.31■□□□□ 0.84
RAD9AQ99638 ZNF815P-204ENST00000434898 1737 ntBASIC20.31■□□□□ 0.84
RAD9AQ99638 FCER2-201ENST00000346664 1596 ntAPPRIS P2 TSL 1 (best) BASIC20.31■□□□□ 0.84
RAD9AQ99638 ZNF346-209ENST00000512315 1575 ntTSL 2 BASIC20.31■□□□□ 0.84
RAD9AQ99638 FCER2-205ENST00000597921 1560 ntAPPRIS P2 TSL 1 (best) BASIC20.31■□□□□ 0.84
RAD9AQ99638 LAT-204ENST00000395461 1448 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
RAD9AQ99638 PSCA-201ENST00000301258 1020 ntAPPRIS P2 TSL 1 (best) BASIC20.31■□□□□ 0.84
RAD9AQ99638 MOS-201ENST00000311923 1041 ntAPPRIS P1 BASIC20.31■□□□□ 0.84
RAD9AQ99638 CKLF-202ENST00000345436 571 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
RAD9AQ99638 AC013402.1-201ENST00000456999 561 ntTSL 4 BASIC20.31■□□□□ 0.84
RAD9AQ99638 TOB2P1-201ENST00000469761 992 ntBASIC20.31■□□□□ 0.84
RAD9AQ99638 EFCAB11-211ENST00000556609 568 ntTSL 3 BASIC20.31■□□□□ 0.84
RAD9AQ99638 RNF126P1-202ENST00000569893 925 ntBASIC20.31■□□□□ 0.84
RAD9AQ99638 STAU2-229ENST00000524300 3065 ntAPPRIS P4 TSL 2 BASIC20.31■□□□□ 0.84
RAD9AQ99638 FKBP3-201ENST00000216330 1684 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
RAD9AQ99638 MCAT-201ENST00000290429 2056 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
RAD9AQ99638 PIGQ-206ENST00000422307 2052 ntTSL 3 BASIC20.31■□□□□ 0.84
RAD9AQ99638 BRSK2-212ENST00000531197 3163 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
RAD9AQ99638 PHACTR2-203ENST00000367584 2490 ntAPPRIS ALT2 TSL 5 BASIC20.31■□□□□ 0.84
RAD9AQ99638 TBL1Y-201ENST00000346432 2312 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
RAD9AQ99638 PRKAG2-203ENST00000418337 2318 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
RAD9AQ99638 ASCL5-201ENST00000449188 2026 ntAPPRIS P1 TSL 3 BASIC20.31■□□□□ 0.84
RAD9AQ99638 PRMT2-206ENST00000397638 2131 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
RAD9AQ99638 CDC14B-208ENST00000463569 1734 ntAPPRIS ALT2 TSL 5 BASIC20.3■□□□□ 0.84
RAD9AQ99638 TFCP2-205ENST00000549867 1727 ntTSL 5 BASIC20.3■□□□□ 0.84
RAD9AQ99638 KCNN4-201ENST00000262888 2240 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
RAD9AQ99638 OTUB1-210ENST00000541478 1803 ntTSL 5 BASIC20.3■□□□□ 0.84
RAD9AQ99638 CMTM1-204ENST00000336328 606 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
RAD9AQ99638 PHPT1-202ENST00000371661 985 ntTSL 5 BASIC20.3■□□□□ 0.84
RAD9AQ99638 KCNAB2-205ENST00000378092 1202 ntAPPRIS ALT1 TSL 5 BASIC20.3■□□□□ 0.84
RAD9AQ99638 AC093459.1-201ENST00000444567 481 ntTSL 3 BASIC20.3■□□□□ 0.84
RAD9AQ99638 CMPK1-205ENST00000471289 816 ntTSL 2 BASIC20.3■□□□□ 0.84
RAD9AQ99638 AC008825.1-201ENST00000504398 452 ntTSL 3 BASIC20.3■□□□□ 0.84
RAD9AQ99638 AC106795.1-205ENST00000512851 1056 ntBASIC20.3■□□□□ 0.84
RAD9AQ99638 CMTM1-213ENST00000529506 581 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
RAD9AQ99638 SRSF1-209ENST00000585096 568 ntTSL 4 BASIC20.3■□□□□ 0.84
RAD9AQ99638 AC015961.2-201ENST00000589281 701 ntTSL 3 BASIC20.3■□□□□ 0.84
RAD9AQ99638 AC020909.1-201ENST00000599632 1265 ntAPPRIS P1 TSL 5 BASIC20.3■□□□□ 0.84
RAD9AQ99638 TPSB2-201ENST00000606293 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC20.3■□□□□ 0.84
RAD9AQ99638 IZUMO4-213ENST00000620263 947 ntTSL 3 BASIC20.3■□□□□ 0.84
RAD9AQ99638 LTK-201ENST00000263800 3046 ntAPPRIS P4 TSL 1 (best) BASIC20.3■□□□□ 0.84
RAD9AQ99638 SLCO3A1-202ENST00000424469 2705 ntTSL 1 (best) BASIC20.3■□□□□ 0.84
RAD9AQ99638 MRPL3-202ENST00000425847 1457 ntTSL 2 BASIC20.3■□□□□ 0.84
RAD9AQ99638 MOB3C-202ENST00000319928 2822 ntAPPRIS P1 TSL 2 BASIC20.3■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 23.4 ms