Protein–RNA interactions for Protein: Q99603

TRGV9, T-cell receptor gamma variable 9 (Fragment), humanhuman

Predictions only

Length 122 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRGV9Q99603 GORASP1-206ENST00000422110 2523 ntTSL 2 BASIC14.86□□□□□ -0.03
TRGV9Q99603 FGFR3-205ENST00000440486 4287 ntAPPRIS P3 TSL 5 BASIC14.86□□□□□ -0.03
TRGV9Q99603 LONP1-215ENST00000593119 2918 ntTSL 2 BASIC14.86□□□□□ -0.03
TRGV9Q99603 SIX5-201ENST00000317578 3318 ntAPPRIS P2 TSL 1 (best) BASIC14.86□□□□□ -0.03
TRGV9Q99603 EFTUD1P1-204ENST00000560401 1798 ntBASIC14.85□□□□□ -0.03
TRGV9Q99603 LIN28B-AS1-203ENST00000636682 1797 ntTSL 3 BASIC14.85□□□□□ -0.03
TRGV9Q99603 CLN8-211ENST00000636934 1790 ntTSL 5 BASIC14.85□□□□□ -0.03
TRGV9Q99603 TMPRSS5-205ENST00000538955 1956 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
TRGV9Q99603 ENTPD8-202ENST00000371506 2222 ntAPPRIS P1 TSL 5 BASIC14.85□□□□□ -0.03
TRGV9Q99603 NF2-203ENST00000353887 1845 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
TRGV9Q99603 PLCH2-205ENST00000449969 5450 ntTSL 5 BASIC14.85□□□□□ -0.03
TRGV9Q99603 AHCYL2-201ENST00000325006 5056 ntAPPRIS P3 TSL 1 (best) BASIC14.85□□□□□ -0.03
TRGV9Q99603 NAF1-202ENST00000422287 1604 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
TRGV9Q99603 GIPR-202ENST00000304207 1432 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
TRGV9Q99603 KRT18-202ENST00000388837 1420 ntAPPRIS P1 TSL 5 BASIC14.85□□□□□ -0.03
TRGV9Q99603 MEN1-205ENST00000377316 2868 ntTSL 5 BASIC14.85□□□□□ -0.03
TRGV9Q99603 EMX2-203ENST00000553456 2897 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
TRGV9Q99603 MSL1-202ENST00000398532 4707 ntTSL 1 (best) BASIC14.85□□□□□ -0.03
TRGV9Q99603 C2CD2L-201ENST00000336702 4771 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
TRGV9Q99603 ADARB1-201ENST00000348831 6882 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
TRGV9Q99603 MCU-202ENST00000373053 2949 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
TRGV9Q99603 OGG1-201ENST00000302003 1655 ntAPPRIS P4 TSL 1 (best) BASIC14.85□□□□□ -0.03
TRGV9Q99603 PTGER3-203ENST00000354608 1470 ntAPPRIS ALT2 TSL 5 BASIC14.85□□□□□ -0.03
TRGV9Q99603 AC068473.1-201ENST00000317008 1111 ntTSL 2 BASIC14.85□□□□□ -0.03
TRGV9Q99603 UNG-202ENST00000336865 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
TRGV9Q99603 XBP1-202ENST00000344347 1131 ntTSL 5 BASIC14.85□□□□□ -0.03
TRGV9Q99603 CUEDC2-201ENST00000369937 1191 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
TRGV9Q99603 PSEN1-203ENST00000394157 1249 ntTSL 2 BASIC14.85□□□□□ -0.03
TRGV9Q99603 AL021707.1-201ENST00000416406 500 ntTSL 3 BASIC14.85□□□□□ -0.03
TRGV9Q99603 TTTY14-205ENST00000454875 544 ntTSL 2 BASIC14.85□□□□□ -0.03
TRGV9Q99603 C1orf52-203ENST00000471115 1219 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
TRGV9Q99603 TK2-208ENST00000545043 1120 ntTSL 2 BASIC14.85□□□□□ -0.03
TRGV9Q99603 SYNGR4-202ENST00000595322 533 ntTSL 3 BASIC14.85□□□□□ -0.03
TRGV9Q99603 NKD2-201ENST00000274150 1940 ntAPPRIS ALT2 TSL 1 (best) BASIC14.85□□□□□ -0.03
TRGV9Q99603 HYOU1-212ENST00000532519 2162 ntTSL 5 BASIC14.85□□□□□ -0.03
TRGV9Q99603 NDRG2-227ENST00000554143 1980 ntAPPRIS ALT1 TSL 2 BASIC14.85□□□□□ -0.03
TRGV9Q99603 COL16A1-203ENST00000373672 5736 ntAPPRIS P1 TSL 5 BASIC14.85□□□□□ -0.03
TRGV9Q99603 GORASP1-220ENST00000479927 1345 ntTSL 2 BASIC14.85□□□□□ -0.03
TRGV9Q99603 MRC2-201ENST00000303375 5988 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
TRGV9Q99603 TRIM63-201ENST00000374272 1770 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
TRGV9Q99603 OCSTAMP-201ENST00000279028 2043 ntAPPRIS P1 TSL 5 BASIC14.85□□□□□ -0.03
TRGV9Q99603 CDC42EP2-201ENST00000279249 2023 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
TRGV9Q99603 WIPF1-202ENST00000359761 2003 ntAPPRIS P2 TSL 1 (best) BASIC14.85□□□□□ -0.03
TRGV9Q99603 DTWD1-202ENST00000403028 1584 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
TRGV9Q99603 ARSA-203ENST00000395619 1824 ntAPPRIS P1 TSL 5 BASIC14.85□□□□□ -0.03
TRGV9Q99603 ULK2-201ENST00000361658 3908 ntAPPRIS P1 TSL 1 (best) BASIC14.85□□□□□ -0.03
TRGV9Q99603 TWF1-201ENST00000395510 3045 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
TRGV9Q99603 SAMD11-216ENST00000620200 1874 ntTSL 5 BASIC14.84□□□□□ -0.03
TRGV9Q99603 RUNX2-202ENST00000371432 5487 ntAPPRIS ALT2 TSL 5 BASIC14.84□□□□□ -0.03
TRGV9Q99603 GTF2H4-202ENST00000376316 1673 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
TRGV9Q99603 FADS1-204ENST00000433932 1690 ntTSL 2 BASIC14.84□□□□□ -0.03
TRGV9Q99603 RGS9BP-201ENST00000334176 2894 ntAPPRIS P1 BASIC14.84□□□□□ -0.03
TRGV9Q99603 NOMO3-202ENST00000399336 4356 ntAPPRIS P2 TSL 1 (best) BASIC14.84□□□□□ -0.03
TRGV9Q99603 TACO1-201ENST00000258975 1469 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
TRGV9Q99603 SIM2-201ENST00000290399 4442 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
TRGV9Q99603 P3H1-204ENST00000397054 2705 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
TRGV9Q99603 SPAG9-202ENST00000357122 4761 ntAPPRIS P2 TSL 1 (best) BASIC14.84□□□□□ -0.03
TRGV9Q99603 ALDH5A1-201ENST00000348925 2266 ntAPPRIS P4 TSL 1 (best) BASIC14.84□□□□□ -0.03
TRGV9Q99603 SNAPC2-201ENST00000221573 1542 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
TRGV9Q99603 ZNF580-201ENST00000325333 1261 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
TRGV9Q99603 XXYLT1-202ENST00000356740 564 ntTSL 2 BASIC14.84□□□□□ -0.03
TRGV9Q99603 PPA1-202ENST00000373232 1295 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
TRGV9Q99603 TNIK-208ENST00000465393 750 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
TRGV9Q99603 CAPN5-206ENST00000531028 534 ntTSL 5 BASIC14.84□□□□□ -0.03
TRGV9Q99603 AC011611.3-201ENST00000552367 569 ntTSL 4 BASIC14.84□□□□□ -0.03
TRGV9Q99603 AC113189.1-201ENST00000570444 327 ntTSL 3 BASIC14.84□□□□□ -0.03
TRGV9Q99603 FXYD1-204ENST00000588081 645 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
TRGV9Q99603 AC027307.1-201ENST00000590252 457 ntTSL 5 BASIC14.84□□□□□ -0.03
TRGV9Q99603 AC083880.1-201ENST00000608266 535 ntBASIC14.84□□□□□ -0.03
TRGV9Q99603 IL15RA-221ENST00000620865 1037 ntAPPRIS ALT2 TSL 1 (best) BASIC14.84□□□□□ -0.03
TRGV9Q99603 TMEM255B-202ENST00000375353 6100 ntAPPRIS P2 TSL 1 (best) BASIC14.84□□□□□ -0.03
TRGV9Q99603 TXNRD3-205ENST00000640797 1824 ntAPPRIS ALT2 TSL 2 BASIC14.84□□□□□ -0.03
TRGV9Q99603 NDUFV3-202ENST00000354250 1575 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
TRGV9Q99603 NTMT1-209ENST00000611055 1562 ntAPPRIS P1 TSL 3 BASIC14.84□□□□□ -0.03
TRGV9Q99603 MAPK9-207ENST00000452135 4815 ntAPPRIS P5 TSL 5 BASIC14.84□□□□□ -0.03
TRGV9Q99603 UBE2I-203ENST00000397514 2976 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
TRGV9Q99603 RBPMS-210ENST00000520191 1613 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
TRGV9Q99603 FAM83A-205ENST00000522648 1604 ntTSL 1 (best) BASIC14.84□□□□□ -0.03
TRGV9Q99603 CNOT9-209ENST00000627282 1621 ntTSL 2 BASIC14.84□□□□□ -0.03
TRGV9Q99603 LGALS9C-209ENST00000581545 1378 ntTSL 5 BASIC14.84□□□□□ -0.03
TRGV9Q99603 DNAJC28-204ENST00000617313 2237 ntAPPRIS P1 TSL 5 BASIC14.84□□□□□ -0.03
TRGV9Q99603 CHRNA4-201ENST00000370263 5577 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
TRGV9Q99603 DUSP15-209ENST00000486996 1651 ntTSL 2 BASIC14.84□□□□□ -0.03
TRGV9Q99603 BICD1-207ENST00000551848 1962 ntBASIC14.84□□□□□ -0.03
TRGV9Q99603 NR2F1-205ENST00000615873 1427 ntTSL 1 (best) BASIC14.83□□□□□ -0.03
TRGV9Q99603 GRB10-208ENST00000403097 5432 ntTSL 1 (best) BASIC14.83□□□□□ -0.03
TRGV9Q99603 RIPK2-201ENST00000220751 2584 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
TRGV9Q99603 IMPAD1-201ENST00000262644 7199 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
TRGV9Q99603 NRG2-202ENST00000289422 2923 ntTSL 5 BASIC14.83□□□□□ -0.03
TRGV9Q99603 ZNF395-211ENST00000523202 2068 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
TRGV9Q99603 ARHGAP22-203ENST00000374172 2380 ntTSL 2 BASIC14.83□□□□□ -0.03
TRGV9Q99603 UBE2Q2-208ENST00000569423 2969 ntTSL 2 BASIC14.83□□□□□ -0.03
TRGV9Q99603 UBE2QL1-201ENST00000399816 4317 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
TRGV9Q99603 CCDC17-209ENST00000528266 2181 ntAPPRIS P3 TSL 2 BASIC14.83□□□□□ -0.04
TRGV9Q99603 MAPT-209ENST00000446361 5345 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
TRGV9Q99603 SMARCC2-201ENST00000267064 4076 ntAPPRIS P4 TSL 1 (best) BASIC14.83□□□□□ -0.04
TRGV9Q99603 SSC4D-201ENST00000275560 2801 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
TRGV9Q99603 TSPAN3-210ENST00000561277 1592 ntTSL 5 BASIC14.83□□□□□ -0.04
TRGV9Q99603 IFI27L2-201ENST00000238609 511 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
TRGV9Q99603 RAC3-201ENST00000306897 1090 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Retrieved 100 of 98,524 protein–RNA pairs in 35.5 ms