Protein–RNA interactions for Protein: Q99496

RNF2, E3 ubiquitin-protein ligase RING2, humanhuman

Predictions only

Length 336 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF2Q99496 FZR1-203ENST00000441788 5212 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
RNF2Q99496 NPAS1-207ENST00000602189 1643 ntTSL 5 BASIC15.15■□□□□ 0.02
RNF2Q99496 MZB1-201ENST00000302125 825 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
RNF2Q99496 PIP4K2A-202ENST00000376573 3802 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
RNF2Q99496 MPV17L-202ENST00000396385 1037 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
RNF2Q99496 RAMP1-202ENST00000403885 650 ntTSL 3 BASIC15.15■□□□□ 0.02
RNF2Q99496 ZNF487-202ENST00000437590 2111 ntTSL 2 BASIC15.15■□□□□ 0.02
RNF2Q99496 ZNF467-202ENST00000484747 913 ntTSL 2 BASIC15.15■□□□□ 0.02
RNF2Q99496 AC022509.3-202ENST00000545819 566 ntTSL 3 BASIC15.15■□□□□ 0.02
RNF2Q99496 TMEM191B-201ENST00000612978 1220 ntAPPRIS P2 TSL 5 BASIC15.15■□□□□ 0.02
RNF2Q99496 PPM1D-204ENST00000629650 1525 ntTSL 5 BASIC15.15■□□□□ 0.02
RNF2Q99496 ACVR1B-205ENST00000541224 1791 ntTSL 2 BASIC15.15■□□□□ 0.02
RNF2Q99496 SLC23A3-201ENST00000295738 2037 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
RNF2Q99496 BEND4-201ENST00000502486 8765 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
RNF2Q99496 ZBTB48-202ENST00000377674 2293 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
RNF2Q99496 FGFBP3-201ENST00000311575 2545 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
RNF2Q99496 SLC8A3-202ENST00000356921 5250 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
RNF2Q99496 GBGT1-208ENST00000540636 1934 ntTSL 2 BASIC15.15■□□□□ 0.02
RNF2Q99496 LDLRAD4-211ENST00000587757 2171 ntTSL 2 BASIC15.15■□□□□ 0.02
RNF2Q99496 ZNF346-201ENST00000358149 2314 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
RNF2Q99496 CHTOP-204ENST00000368694 2096 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
RNF2Q99496 PGAM1-201ENST00000334828 1830 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
RNF2Q99496 ASPHD1-201ENST00000308748 1584 ntAPPRIS P2 TSL 1 (best) BASIC15.15■□□□□ 0.02
RNF2Q99496 ARHGDIA-202ENST00000400721 1568 ntTSL 2 BASIC15.15■□□□□ 0.02
RNF2Q99496 C12orf42-208ENST00000548883 1336 ntAPPRIS P2 TSL 1 (best) BASIC15.15■□□□□ 0.02
RNF2Q99496 TMEM191A-208ENST00000450925 1961 ntTSL 2 BASIC15.15■□□□□ 0.02
RNF2Q99496 MCIDAS-201ENST00000513312 1736 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
RNF2Q99496 GMPPA-213ENST00000622191 1473 ntTSL 5 BASIC15.14■□□□□ 0.01
RNF2Q99496 PCID2-202ENST00000337344 1898 ntAPPRIS P1 TSL 2 BASIC15.14■□□□□ 0.01
RNF2Q99496 ZNF274-212ENST00000617501 2538 ntAPPRIS P4 TSL 1 (best) BASIC15.14■□□□□ 0.01
RNF2Q99496 PALM3-201ENST00000340790 2262 ntAPPRIS P2 TSL 5 BASIC15.14■□□□□ 0.01
RNF2Q99496 WDR34-201ENST00000372715 1755 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
RNF2Q99496 DSCC1-201ENST00000313655 2314 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
RNF2Q99496 CDK11A-205ENST00000378633 2458 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
RNF2Q99496 MTFR1L-202ENST00000374301 2099 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
RNF2Q99496 EIF4E3-203ENST00000421769 777 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
RNF2Q99496 AKAIN1-201ENST00000434239 575 ntAPPRIS P1 TSL 2 BASIC15.14■□□□□ 0.01
RNF2Q99496 MAGI2-AS3-209ENST00000448195 774 ntTSL 3 BASIC15.14■□□□□ 0.01
RNF2Q99496 GATS-209ENST00000454084 1030 ntTSL 3 BASIC15.14■□□□□ 0.01
RNF2Q99496 AL359182.2-201ENST00000457720 606 ntTSL 3 BASIC15.14■□□□□ 0.01
RNF2Q99496 RGMA-211ENST00000557420 989 ntTSL 3 BASIC15.14■□□□□ 0.01
RNF2Q99496 AL049874.3-201ENST00000557618 868 ntTSL 3 BASIC15.14■□□□□ 0.01
RNF2Q99496 AC006435.1-201ENST00000571775 1065 ntTSL 5 BASIC15.14■□□□□ 0.01
RNF2Q99496 AC083880.1-201ENST00000608266 535 ntBASIC15.14■□□□□ 0.01
RNF2Q99496 SHISA5-220ENST00000619810 2385 ntTSL 2 BASIC15.14■□□□□ 0.01
RNF2Q99496 HSF2-201ENST00000368455 2549 ntAPPRIS P3 TSL 1 (best) BASIC15.14■□□□□ 0.01
RNF2Q99496 C15orf56-202ENST00000623360 2129 ntTSL 2 BASIC15.14■□□□□ 0.01
RNF2Q99496 SMTN-204ENST00000404574 1735 ntTSL 2 BASIC15.14■□□□□ 0.01
RNF2Q99496 SOCS2-210ENST00000551556 1716 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
RNF2Q99496 DENND6B-201ENST00000413817 4939 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
RNF2Q99496 PPARG-202ENST00000309576 1870 ntAPPRIS ALT1 TSL 2 BASIC15.14■□□□□ 0.01
RNF2Q99496 ITSN2-201ENST00000355123 6300 ntAPPRIS P4 TSL 1 (best) BASIC15.14■□□□□ 0.01
RNF2Q99496 PSPC1-206ENST00000619300 2013 ntAPPRIS P1 TSL 5 BASIC15.14■□□□□ 0.01
RNF2Q99496 HSPB8-201ENST00000281938 2152 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
RNF2Q99496 KCNE5-201ENST00000372101 1473 ntAPPRIS P1 BASIC15.14■□□□□ 0.01
RNF2Q99496 SLC38A11-203ENST00000409149 1621 ntAPPRIS P2 TSL 2 BASIC15.14■□□□□ 0.01
RNF2Q99496 UMOD-201ENST00000302509 2477 ntAPPRIS P3 TSL 5 BASIC15.14■□□□□ 0.01
RNF2Q99496 AC006333.2-201ENST00000607957 2099 ntBASIC15.13■□□□□ 0.01
RNF2Q99496 MON1A-202ENST00000417270 2527 ntAPPRIS ALT2 TSL 5 BASIC15.13■□□□□ 0.01
RNF2Q99496 MRGPRG-AS1-201ENST00000420873 1818 ntTSL 2 BASIC15.13■□□□□ 0.01
RNF2Q99496 REPS2-201ENST00000303843 7771 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
RNF2Q99496 CDC42EP5-201ENST00000301200 864 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
RNF2Q99496 C11orf86-201ENST00000308963 1187 ntAPPRIS P1 TSL 2 BASIC15.13■□□□□ 0.01
RNF2Q99496 AP1AR-202ENST00000309703 2337 ntAPPRIS ALT1 TSL 1 (best) BASIC15.13■□□□□ 0.01
RNF2Q99496 RNF5-203ENST00000375094 1168 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
RNF2Q99496 N4BP2L1-203ENST00000380133 903 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
RNF2Q99496 WWTR1-AS1-203ENST00000495094 975 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
RNF2Q99496 AL356020.1-201ENST00000554235 1076 ntTSL 5 BASIC15.13■□□□□ 0.01
RNF2Q99496 TJP1-212ENST00000614355 6977 ntAPPRIS ALT2 TSL 5 BASIC15.13■□□□□ 0.01
RNF2Q99496 CLASRP-201ENST00000221455 2234 ntAPPRIS P2 TSL 1 (best) BASIC15.13■□□□□ 0.01
RNF2Q99496 NFKBIZ-201ENST00000326151 2058 ntTSL 2 BASIC15.13■□□□□ 0.01
RNF2Q99496 RPP25-201ENST00000322177 3049 ntAPPRIS P1 BASIC15.13■□□□□ 0.01
RNF2Q99496 VSTM2B-201ENST00000335523 1488 ntAPPRIS P1 TSL 5 BASIC15.13■□□□□ 0.01
RNF2Q99496 NAPA-210ENST00000595227 1460 ntTSL 3 BASIC15.13■□□□□ 0.01
RNF2Q99496 QTRT1-201ENST00000250237 1317 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
RNF2Q99496 CENPH-206ENST00000515001 1305 ntTSL 2 BASIC15.13■□□□□ 0.01
RNF2Q99496 PHRF1-202ENST00000413872 5224 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
RNF2Q99496 KLHL17-201ENST00000338591 2560 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
RNF2Q99496 CBSL-210ENST00000624934 1992 ntTSL 5 BASIC15.13■□□□□ 0.01
RNF2Q99496 MINDY2-202ENST00000450403 4820 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
RNF2Q99496 CD7-206ENST00000583376 1659 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
RNF2Q99496 PRKCD-201ENST00000330452 2680 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
RNF2Q99496 NFATC4-220ENST00000555393 2235 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
RNF2Q99496 AL355987.4-201ENST00000415992 4244 ntTSL 2 BASIC15.12■□□□□ 0.01
RNF2Q99496 AC093525.10-201ENST00000625130 1569 ntBASIC15.12■□□□□ 0.01
RNF2Q99496 GPR142-201ENST00000335666 1437 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
RNF2Q99496 FAM66E-201ENST00000529252 1433 ntTSL 2 BASIC15.12■□□□□ 0.01
RNF2Q99496 CALM3-201ENST00000291295 2289 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
RNF2Q99496 CLEC10A-201ENST00000254868 1797 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
RNF2Q99496 Z98044.1-201ENST00000632503 1764 ntBASIC15.12■□□□□ 0.01
RNF2Q99496 RPS14-201ENST00000312037 711 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
RNF2Q99496 HCFC1R1-202ENST00000354679 765 ntTSL 2 BASIC15.12■□□□□ 0.01
RNF2Q99496 AL390719.1-204ENST00000412397 1219 ntBASIC15.12■□□□□ 0.01
RNF2Q99496 NBL1-212ENST00000621723 2133 ntAPPRIS P3 TSL 2 BASIC15.12■□□□□ 0.01
RNF2Q99496 AL160396.2-202ENST00000636692 566 ntAPPRIS ALT2 TSL 5 BASIC15.12■□□□□ 0.01
RNF2Q99496 PHRF1-205ENST00000533464 5218 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
RNF2Q99496 ZNF354C-201ENST00000315475 5411 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
RNF2Q99496 EPN2-212ENST00000575595 1491 ntTSL 2 BASIC15.12■□□□□ 0.01
RNF2Q99496 BABAM1-208ENST00000598188 1470 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
RNF2Q99496 SHF-201ENST00000290894 2500 ntAPPRIS P3 TSL 2 BASIC15.12■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 19.7 ms