Protein–RNA interactions for Protein: Q96TA0

PCDHB18P, Putative protocadherin beta-18, humanhuman

Predictions only

Length 734 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB18PQ96TA0 ACOT8-201ENST00000217455 1168 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
PCDHB18PQ96TA0 SLC35A2-202ENST00000376512 903 ntTSL 2 BASIC20.19■□□□□ 0.82
PCDHB18PQ96TA0 PDCD2-202ENST00000392090 936 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
PCDHB18PQ96TA0 KRT18P29-201ENST00000397031 1267 ntBASIC20.19■□□□□ 0.82
PCDHB18PQ96TA0 UNC5D-204ENST00000420357 2966 ntTSL 5 BASIC20.19■□□□□ 0.82
PCDHB18PQ96TA0 UBE2K-204ENST00000503368 891 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
PCDHB18PQ96TA0 ROPN1L-202ENST00000503804 1291 ntAPPRIS P1 TSL 2 BASIC20.19■□□□□ 0.82
PCDHB18PQ96TA0 AC091564.5-201ENST00000526456 820 ntTSL 4 BASIC20.19■□□□□ 0.82
PCDHB18PQ96TA0 AC011445.1-201ENST00000601911 877 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
PCDHB18PQ96TA0 AL024498.1-202ENST00000606652 480 ntTSL 2 BASIC20.19■□□□□ 0.82
PCDHB18PQ96TA0 CR392000.1-201ENST00000624770 1228 ntBASIC20.19■□□□□ 0.82
PCDHB18PQ96TA0 RCC2P6-201ENST00000526625 1557 ntBASIC20.19■□□□□ 0.82
PCDHB18PQ96TA0 MYBL2-202ENST00000396863 2704 ntTSL 2 BASIC20.19■□□□□ 0.82
PCDHB18PQ96TA0 ZBED3-201ENST00000255198 6172 ntAPPRIS P2 TSL 1 (best) BASIC20.19■□□□□ 0.82
PCDHB18PQ96TA0 TTC19-201ENST00000261647 3002 ntAPPRIS P2 TSL 1 (best) BASIC20.19■□□□□ 0.82
PCDHB18PQ96TA0 TCAIM-203ENST00000396078 2178 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
PCDHB18PQ96TA0 LUC7L2-210ENST00000619796 2783 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
PCDHB18PQ96TA0 SCFD2-204ENST00000611795 1320 ntTSL 5 BASIC20.19■□□□□ 0.82
PCDHB18PQ96TA0 TMEM191C-214ENST00000621561 1337 ntAPPRIS P2 TSL 5 BASIC20.19■□□□□ 0.82
PCDHB18PQ96TA0 ANHX-202ENST00000545940 3452 ntAPPRIS P1 TSL 5 BASIC20.19■□□□□ 0.82
PCDHB18PQ96TA0 PDLIM4-201ENST00000253754 2282 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
PCDHB18PQ96TA0 CHPF-203ENST00000535926 2634 ntTSL 2 BASIC20.19■□□□□ 0.82
PCDHB18PQ96TA0 FAM99A-201ENST00000382167 1432 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
PCDHB18PQ96TA0 PTGER3-209ENST00000460330 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC20.19■□□□□ 0.82
PCDHB18PQ96TA0 NUP50-AS1-201ENST00000426282 2076 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
PCDHB18PQ96TA0 ARPP19-201ENST00000249822 5301 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
PCDHB18PQ96TA0 SMIM10L2A-201ENST00000417443 5230 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
PCDHB18PQ96TA0 KLHL17-201ENST00000338591 2560 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
PCDHB18PQ96TA0 MYEOV-201ENST00000308946 2287 ntAPPRIS P3 TSL 1 (best) BASIC20.18■□□□□ 0.82
PCDHB18PQ96TA0 GPR137-204ENST00000438980 1596 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
PCDHB18PQ96TA0 ANKS3-202ENST00000446014 2265 ntTSL 5 BASIC20.18■□□□□ 0.82
PCDHB18PQ96TA0 HDAC11-221ENST00000522202 1559 ntAPPRIS ALT2 TSL 2 BASIC20.18■□□□□ 0.82
PCDHB18PQ96TA0 P3H1-204ENST00000397054 2705 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
PCDHB18PQ96TA0 DNM1-206ENST00000475805 2710 ntAPPRIS ALT1 TSL 2 BASIC20.18■□□□□ 0.82
PCDHB18PQ96TA0 ABCC5-211ENST00000446941 883 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
PCDHB18PQ96TA0 AC098590.1-201ENST00000468126 897 ntBASIC20.18■□□□□ 0.82
PCDHB18PQ96TA0 RARRES2P10-201ENST00000564312 460 ntBASIC20.18■□□□□ 0.82
PCDHB18PQ96TA0 AC091551.1-201ENST00000590722 1228 ntAPPRIS P1 TSL 2 BASIC20.18■□□□□ 0.82
PCDHB18PQ96TA0 SPIB-206ENST00000596074 847 ntTSL 2 BASIC20.18■□□□□ 0.82
PCDHB18PQ96TA0 HOXD12-202ENST00000406506 1318 ntAPPRIS P1 TSL 3 BASIC20.18■□□□□ 0.82
PCDHB18PQ96TA0 PCCB-216ENST00000483687 1727 ntTSL 3 BASIC20.18■□□□□ 0.82
PCDHB18PQ96TA0 EMX2-203ENST00000553456 2897 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
PCDHB18PQ96TA0 MCU-202ENST00000373053 2949 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
PCDHB18PQ96TA0 KCNQ2-201ENST00000344425 1426 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
PCDHB18PQ96TA0 FGFR1-241ENST00000619564 5482 ntTSL 5 BASIC20.17■□□□□ 0.82
PCDHB18PQ96TA0 AC009113.1-201ENST00000570267 2443 ntBASIC20.17■□□□□ 0.82
PCDHB18PQ96TA0 GAL3ST1-206ENST00000406955 1635 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
PCDHB18PQ96TA0 RPH3A-203ENST00000543106 2581 ntAPPRIS ALT2 TSL 2 BASIC20.17■□□□□ 0.82
PCDHB18PQ96TA0 UNG-202ENST00000336865 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
PCDHB18PQ96TA0 PRSS33-201ENST00000293851 1694 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
PCDHB18PQ96TA0 GPRIN2-201ENST00000374314 1696 ntAPPRIS P1 BASIC20.17■□□□□ 0.82
PCDHB18PQ96TA0 PCGF3-208ENST00000470161 1652 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
PCDHB18PQ96TA0 PALM3-201ENST00000340790 2262 ntAPPRIS P2 TSL 5 BASIC20.17■□□□□ 0.82
PCDHB18PQ96TA0 WIZP1-201ENST00000531444 2299 ntBASIC20.17■□□□□ 0.82
PCDHB18PQ96TA0 AL360181.5-201ENST00000368554 1044 ntAPPRIS P1 TSL 2 BASIC20.17■□□□□ 0.82
PCDHB18PQ96TA0 TSPAN4-209ENST00000409543 1031 ntAPPRIS P1 TSL 5 BASIC20.17■□□□□ 0.82
PCDHB18PQ96TA0 DERL1-203ENST00000419562 918 ntTSL 2 BASIC20.17■□□□□ 0.82
PCDHB18PQ96TA0 AC073050.1-201ENST00000442316 462 ntTSL 3 BASIC20.17■□□□□ 0.82
PCDHB18PQ96TA0 MAGI2-AS3-211ENST00000451809 707 ntTSL 3 BASIC20.17■□□□□ 0.82
PCDHB18PQ96TA0 MIR1302-2HG-202ENST00000473358 712 ntTSL 5 BASIC20.17■□□□□ 0.82
PCDHB18PQ96TA0 AC011506.1-201ENST00000474329 610 ntBASIC20.17■□□□□ 0.82
PCDHB18PQ96TA0 EFTUD1P1-201ENST00000558187 596 ntTSL 4 BASIC20.17■□□□□ 0.82
PCDHB18PQ96TA0 IRX5-204ENST00000560154 879 ntTSL 5 BASIC20.17■□□□□ 0.82
PCDHB18PQ96TA0 AC140725.1-202ENST00000561145 712 ntTSL 5 BASIC20.17■□□□□ 0.82
PCDHB18PQ96TA0 METTL23-208ENST00000588822 1049 ntTSL 3 BASIC20.17■□□□□ 0.82
PCDHB18PQ96TA0 AC020922.2-201ENST00000596786 359 ntTSL 4 BASIC20.17■□□□□ 0.82
PCDHB18PQ96TA0 IRX5-205ENST00000620085 881 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
PCDHB18PQ96TA0 KCNH1-210ENST00000640044 1818 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
PCDHB18PQ96TA0 SH3BP1-201ENST00000357436 2852 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
PCDHB18PQ96TA0 SNAP47-201ENST00000315781 2367 ntAPPRIS P3 TSL 1 (best) BASIC20.17■□□□□ 0.82
PCDHB18PQ96TA0 NECTIN3-211ENST00000493615 1876 ntAPPRIS ALT2 TSL 2 BASIC20.17■□□□□ 0.82
PCDHB18PQ96TA0 CDC42BPB-201ENST00000361246 6758 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
PCDHB18PQ96TA0 COLEC12-201ENST00000400256 5742 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
PCDHB18PQ96TA0 MAFF-206ENST00000538320 2458 ntAPPRIS P1 TSL 4 BASIC20.17■□□□□ 0.82
PCDHB18PQ96TA0 KRT16P1-201ENST00000399124 1418 ntBASIC20.17■□□□□ 0.82
PCDHB18PQ96TA0 RNF139-201ENST00000303545 2637 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
PCDHB18PQ96TA0 BAIAP2-204ENST00000428708 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
PCDHB18PQ96TA0 PDE8A-202ENST00000339708 2663 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
PCDHB18PQ96TA0 PLCB2-204ENST00000557821 4517 ntAPPRIS ALT1 TSL 1 (best) BASIC20.17■□□□□ 0.82
PCDHB18PQ96TA0 EGLN2-201ENST00000303961 2102 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
PCDHB18PQ96TA0 ZNRF1-202ENST00000335325 4620 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
PCDHB18PQ96TA0 IGFBP4-201ENST00000269593 2200 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
PCDHB18PQ96TA0 PLEKHB2-204ENST00000409158 2277 ntTSL 2 BASIC20.16■□□□□ 0.82
PCDHB18PQ96TA0 ZNF213-202ENST00000416391 2996 ntAPPRIS P1 TSL 5 BASIC20.16■□□□□ 0.82
PCDHB18PQ96TA0 ARHGAP22-203ENST00000374172 2380 ntTSL 2 BASIC20.16■□□□□ 0.82
PCDHB18PQ96TA0 MTSS1-203ENST00000431961 1711 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
PCDHB18PQ96TA0 CTDP1-208ENST00000613122 5866 ntAPPRIS P3 TSL 1 (best) BASIC20.16■□□□□ 0.82
PCDHB18PQ96TA0 ACVR1B-203ENST00000426655 1782 ntTSL 2 BASIC20.16■□□□□ 0.82
PCDHB18PQ96TA0 SIGLEC10-204ENST00000436984 1776 ntTSL 2 BASIC20.16■□□□□ 0.82
PCDHB18PQ96TA0 SNX4-201ENST00000251775 2513 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
PCDHB18PQ96TA0 AP5S1-203ENST00000379573 1848 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
PCDHB18PQ96TA0 TCP11-209ENST00000444780 1841 ntAPPRIS ALT2 TSL 2 BASIC20.16■□□□□ 0.82
PCDHB18PQ96TA0 ARAP1-AS2-201ENST00000500163 1824 ntTSL 2 BASIC20.16■□□□□ 0.82
PCDHB18PQ96TA0 SRRM3-204ENST00000611745 3612 ntAPPRIS P1 TSL 5 BASIC20.16■□□□□ 0.82
PCDHB18PQ96TA0 GRM2-204ENST00000442933 2064 ntTSL 5 BASIC20.16■□□□□ 0.82
PCDHB18PQ96TA0 LONP1-215ENST00000593119 2918 ntTSL 2 BASIC20.16■□□□□ 0.82
PCDHB18PQ96TA0 CENPA-201ENST00000233505 1299 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
PCDHB18PQ96TA0 PTMS-201ENST00000309083 1139 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
PCDHB18PQ96TA0 PEX7-202ENST00000367756 680 ntTSL 3 BASIC20.16■□□□□ 0.82
PCDHB18PQ96TA0 S100A14-203ENST00000368701 1080 ntAPPRIS P1 TSL 2 BASIC20.16■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 38.9 ms