Protein–RNA interactions for Protein: Q96EP0

RNF31, E3 ubiquitin-protein ligase RNF31, humanhuman

Predictions only

Length 1,072 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF31Q96EP0 NFU1-202ENST00000394305 1058 ntTSL 5 BASIC18.33■□□□□ 0.52
RNF31Q96EP0 DNAJC27-AS1-204ENST00000428614 780 ntTSL 3 BASIC18.33■□□□□ 0.52
RNF31Q96EP0 LMCD1-AS1-204ENST00000446281 932 ntTSL 5 BASIC18.33■□□□□ 0.52
RNF31Q96EP0 AC002467.1-201ENST00000457510 657 ntTSL 3 BASIC18.33■□□□□ 0.52
RNF31Q96EP0 BNIP3L-206ENST00000523515 915 ntTSL 2 BASIC18.33■□□□□ 0.52
RNF31Q96EP0 RAB2A-211ENST00000531289 1058 ntTSL 2 BASIC18.33■□□□□ 0.52
RNF31Q96EP0 NME3-204ENST00000563498 920 ntTSL 2 BASIC18.33■□□□□ 0.52
RNF31Q96EP0 RMI2-205ENST00000576027 818 ntTSL 2 BASIC18.33■□□□□ 0.52
RNF31Q96EP0 COLCA2-205ENST00000614153 1264 ntTSL 3 BASIC18.33■□□□□ 0.52
RNF31Q96EP0 WWOX-205ENST00000539474 1670 ntTSL 5 BASIC18.33■□□□□ 0.52
RNF31Q96EP0 MAPK8IP3-216ENST00000610761 5626 ntAPPRIS ALT1 TSL 1 (best) BASIC18.33■□□□□ 0.52
RNF31Q96EP0 NOTCH2NL-204ENST00000579793 1954 ntAPPRIS ALT2 TSL 2 BASIC18.33■□□□□ 0.52
RNF31Q96EP0 SLMAP-201ENST00000295951 5433 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.52
RNF31Q96EP0 RBM6-204ENST00000422955 2324 ntTSL 2 BASIC18.33■□□□□ 0.52
RNF31Q96EP0 ACSS3-201ENST00000261206 2666 ntAPPRIS ALT1 TSL 1 (best) BASIC18.33■□□□□ 0.52
RNF31Q96EP0 UNC5B-201ENST00000335350 6841 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
RNF31Q96EP0 DOK7-206ENST00000515886 2263 ntTSL 2 BASIC18.33■□□□□ 0.52
RNF31Q96EP0 SUMF2-202ENST00000342190 1876 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
RNF31Q96EP0 CCM2-202ENST00000381112 1881 ntAPPRIS ALT2 TSL 2 BASIC18.33■□□□□ 0.52
RNF31Q96EP0 PCCB-208ENST00000468777 1877 ntAPPRIS ALT2 TSL 3 BASIC18.33■□□□□ 0.52
RNF31Q96EP0 EFCAB11-202ENST00000538485 1870 ntTSL 2 BASIC18.33■□□□□ 0.52
RNF31Q96EP0 FAM129C-201ENST00000332386 2222 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.52
RNF31Q96EP0 C14orf180-201ENST00000331952 1455 ntAPPRIS ALT2 TSL 2 BASIC18.33■□□□□ 0.52
RNF31Q96EP0 PLCG1-AS1-201ENST00000454626 1462 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
RNF31Q96EP0 ACTR5-201ENST00000243903 2565 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
RNF31Q96EP0 GAS2L1-208ENST00000616432 2925 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
RNF31Q96EP0 NR1H2-211ENST00000599105 1830 ntAPPRIS ALT2 TSL 5 BASIC18.33■□□□□ 0.52
RNF31Q96EP0 DGKZ-203ENST00000421244 2862 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
RNF31Q96EP0 WWC1-201ENST00000265293 7130 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
RNF31Q96EP0 CLDN14-202ENST00000399135 1752 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
RNF31Q96EP0 DLEU7-201ENST00000400393 2092 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
RNF31Q96EP0 PMPCB-202ENST00000428154 1714 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
RNF31Q96EP0 CXorf49-202ENST00000535490 1715 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
RNF31Q96EP0 CXorf49B-202ENST00000542739 1715 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
RNF31Q96EP0 IL15-208ENST00000529613 1355 ntAPPRIS P1 TSL 5 BASIC18.32■□□□□ 0.52
RNF31Q96EP0 ARID1A-201ENST00000324856 8577 ntAPPRIS P3 TSL 1 (best) BASIC18.32■□□□□ 0.52
RNF31Q96EP0 ARNTL-203ENST00000403290 2746 ntAPPRIS ALT1 TSL 1 (best) BASIC18.32■□□□□ 0.52
RNF31Q96EP0 LIMS2-207ENST00000409808 2315 ntAPPRIS ALT1 TSL 5 BASIC18.32■□□□□ 0.52
RNF31Q96EP0 RUVBL2-211ENST00000601968 1641 ntTSL 5 BASIC18.32■□□□□ 0.52
RNF31Q96EP0 TLK2-202ENST00000343388 3227 ntAPPRIS ALT1 TSL 1 (best) BASIC18.32■□□□□ 0.52
RNF31Q96EP0 PITPNC1-201ENST00000299954 6359 ntAPPRIS ALT2 TSL 5 BASIC18.32■□□□□ 0.52
RNF31Q96EP0 UBE2C-204ENST00000356455 850 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
RNF31Q96EP0 MDK-201ENST00000359803 985 ntAPPRIS P2 TSL 2 BASIC18.32■□□□□ 0.52
RNF31Q96EP0 TSPO2-202ENST00000373161 958 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
RNF31Q96EP0 AK4P3-201ENST00000418260 669 ntBASIC18.32■□□□□ 0.52
RNF31Q96EP0 ICAM1-202ENST00000423829 1296 ntTSL 2 BASIC18.32■□□□□ 0.52
RNF31Q96EP0 AC117947.1-201ENST00000427448 529 ntBASIC18.32■□□□□ 0.52
RNF31Q96EP0 TSPO2-203ENST00000470917 699 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
RNF31Q96EP0 SNCB-205ENST00000510387 730 ntAPPRIS P1 TSL 2 BASIC18.32■□□□□ 0.52
RNF31Q96EP0 TARBP2-220ENST00000552857 916 ntTSL 5 BASIC18.32■□□□□ 0.52
RNF31Q96EP0 ASRGL1-211ENST00000628829 1161 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
RNF31Q96EP0 TNFRSF1A-201ENST00000162749 2223 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
RNF31Q96EP0 LRRC1-202ENST00000370888 3180 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
RNF31Q96EP0 IQSEC2-218ENST00000640694 5958 ntAPPRIS ALT2 TSL 5 BASIC18.32■□□□□ 0.52
RNF31Q96EP0 SUMF2-201ENST00000275607 1894 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
RNF31Q96EP0 PPHLN1-213ENST00000549190 1777 ntTSL 5 BASIC18.32■□□□□ 0.52
RNF31Q96EP0 IFNLR1-202ENST00000327575 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
RNF31Q96EP0 TRIM73-205ENST00000450434 1425 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
RNF31Q96EP0 SHANK1-202ENST00000359082 6459 ntTSL 5 BASIC18.31■□□□□ 0.52
RNF31Q96EP0 TCF3P1-201ENST00000423021 1937 ntBASIC18.31■□□□□ 0.52
RNF31Q96EP0 CACNA1A-227ENST00000636549 6792 ntAPPRIS ALT2 TSL 5 BASIC18.31■□□□□ 0.52
RNF31Q96EP0 VAV1-201ENST00000304076 2825 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
RNF31Q96EP0 KLK14-201ENST00000156499 1060 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
RNF31Q96EP0 PEX11G-201ENST00000221480 1062 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
RNF31Q96EP0 INSIG1-202ENST00000342407 1127 ntTSL 2 BASIC18.31■□□□□ 0.52
RNF31Q96EP0 SHBG-203ENST00000416273 1042 ntAPPRIS ALT2 TSL 3 BASIC18.31■□□□□ 0.52
RNF31Q96EP0 WDR45-218ENST00000473974 1077 ntTSL 5 BASIC18.31■□□□□ 0.52
RNF31Q96EP0 PRKCB-209ENST00000498058 480 ntTSL 3 BASIC18.31■□□□□ 0.52
RNF31Q96EP0 AC012213.1-202ENST00000523422 449 ntTSL 3 BASIC18.31■□□□□ 0.52
RNF31Q96EP0 SELENOS-203ENST00000526049 1188 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
RNF31Q96EP0 CBFB-203ENST00000561924 584 ntTSL 5 BASIC18.31■□□□□ 0.52
RNF31Q96EP0 SHBG-215ENST00000575903 1196 ntTSL 3 BASIC18.31■□□□□ 0.52
RNF31Q96EP0 ELAC2-212ENST00000578071 579 ntTSL 4 BASIC18.31■□□□□ 0.52
RNF31Q96EP0 ZNF667-AS1-208ENST00000594783 475 ntTSL 3 BASIC18.31■□□□□ 0.52
RNF31Q96EP0 ABHD13-201ENST00000375898 5338 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
RNF31Q96EP0 FAM129C-205ENST00000595684 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC18.31■□□□□ 0.52
RNF31Q96EP0 DHRS3-204ENST00000616661 1722 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
RNF31Q96EP0 VSTM2B-201ENST00000335523 1488 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
RNF31Q96EP0 AQP11-201ENST00000313578 2152 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
RNF31Q96EP0 CBR1-205ENST00000530908 1924 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
RNF31Q96EP0 CYP2D6-201ENST00000359033 1433 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
RNF31Q96EP0 FBLN1-204ENST00000402984 2355 ntTSL 5 BASIC18.31■□□□□ 0.52
RNF31Q96EP0 KANK4-202ENST00000354381 2103 ntTSL 2 BASIC18.31■□□□□ 0.52
RNF31Q96EP0 ZNF331-214ENST00000511154 2120 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
RNF31Q96EP0 DOK1-201ENST00000233668 2555 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
RNF31Q96EP0 MCTP1-218ENST00000515393 5396 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
RNF31Q96EP0 ETV4-204ENST00000545089 1628 ntTSL 2 BASIC18.31■□□□□ 0.52
RNF31Q96EP0 SERPINH1-212ENST00000530284 1358 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
RNF31Q96EP0 DDX59-201ENST00000331314 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
RNF31Q96EP0 AC008060.1-201ENST00000401499 1551 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
RNF31Q96EP0 APTR-204ENST00000440088 2029 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
RNF31Q96EP0 SHANK3-203ENST00000445220 5175 ntAPPRIS ALT2 TSL 5 BASIC18.3■□□□□ 0.52
RNF31Q96EP0 UHRF1-203ENST00000615884 2651 ntAPPRIS P1 TSL 2 BASIC18.3■□□□□ 0.52
RNF31Q96EP0 PFKFB3-217ENST00000626882 1965 ntTSL 5 BASIC18.3■□□□□ 0.52
RNF31Q96EP0 PIK3R1-201ENST00000320694 2625 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
RNF31Q96EP0 KRT8P41-201ENST00000533985 1514 ntBASIC18.3■□□□□ 0.52
RNF31Q96EP0 SDHA-201ENST00000264932 2390 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
RNF31Q96EP0 MBD3-207ENST00000590550 2782 ntTSL 2 BASIC18.3■□□□□ 0.52
RNF31Q96EP0 AC093620.1-201ENST00000342963 583 ntTSL 3 BASIC18.3■□□□□ 0.52
RNF31Q96EP0 GUK1-204ENST00000366721 689 ntTSL 3 BASIC18.3■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 25.3 ms