Protein–RNA interactions for Protein: Q96A23

CPNE4, Copine-4, humanhuman

Predicted RBP Predictions only

Length 557 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE4Q96A23 TSPAN4-204ENST00000397404 1462 ntAPPRIS P1 TSL 5 BASIC17.09■□□□□ 0.33
CPNE4Q96A23 NDUFA10-203ENST00000404554 1557 ntTSL 5 BASIC17.09■□□□□ 0.33
CPNE4Q96A23 TPD52-211ENST00000519303 1594 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
CPNE4Q96A23 AC026412.3-201ENST00000605200 1661 ntTSL 5 BASIC17.09■□□□□ 0.33
CPNE4Q96A23 TM9SF1-203ENST00000524835 1938 ntTSL 2 BASIC17.09■□□□□ 0.33
CPNE4Q96A23 AC005906.2-203ENST00000640962 2091 ntTSL 5 BASIC17.09■□□□□ 0.33
CPNE4Q96A23 SLC34A3-201ENST00000361134 2124 ntAPPRIS P1 TSL 2 BASIC17.09■□□□□ 0.33
CPNE4Q96A23 ANXA8-208ENST00000611843 2174 ntTSL 2 BASIC17.09■□□□□ 0.33
CPNE4Q96A23 TMTC1-203ENST00000539277 2758 ntAPPRIS P2 TSL 1 (best) BASIC17.09■□□□□ 0.33
CPNE4Q96A23 SRRM3-204ENST00000611745 3612 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.33
CPNE4Q96A23 ZNF213-201ENST00000396878 3313 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
CPNE4Q96A23 TSNAXIP1-202ENST00000415766 2338 ntAPPRIS ALT2 TSL 2 BASIC17.08■□□□□ 0.33
CPNE4Q96A23 FOLH1-203ENST00000343844 2258 ntTSL 2 BASIC17.08■□□□□ 0.33
CPNE4Q96A23 STIM2-211ENST00000639195 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.33
CPNE4Q96A23 OTOP2-201ENST00000331427 2147 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.33
CPNE4Q96A23 EDEM1-201ENST00000256497 6146 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
CPNE4Q96A23 SLC25A3-201ENST00000188376 1909 ntAPPRIS ALT1 TSL 1 (best) BASIC17.08■□□□□ 0.33
CPNE4Q96A23 LIMS2-204ENST00000409286 1678 ntTSL 2 BASIC17.08■□□□□ 0.32
CPNE4Q96A23 RBPMS-210ENST00000520191 1613 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
CPNE4Q96A23 SERPINH1-212ENST00000530284 1358 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
CPNE4Q96A23 SYT15-205ENST00000503753 1331 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
CPNE4Q96A23 RNF170-205ENST00000526349 1338 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
CPNE4Q96A23 FDX2-206ENST00000492239 773 ntTSL 2 BASIC17.08■□□□□ 0.32
CPNE4Q96A23 FGFR1-203ENST00000341462 6054 ntTSL 5 BASIC17.08■□□□□ 0.32
CPNE4Q96A23 CNTNAP3B-202ENST00000341990 2666 ntTSL 2 BASIC17.08■□□□□ 0.32
CPNE4Q96A23 PLEKHG5-206ENST00000377748 5221 ntAPPRIS ALT2 TSL 2 BASIC17.08■□□□□ 0.32
CPNE4Q96A23 CTBP2-205ENST00000411419 2036 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
CPNE4Q96A23 GNB1-201ENST00000378609 3132 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CPNE4Q96A23 CFAP46-201ENST00000368585 1825 ntAPPRIS ALT2 TSL 2 BASIC17.07■□□□□ 0.32
CPNE4Q96A23 CHMP6-201ENST00000325167 1664 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CPNE4Q96A23 AC124066.1-201ENST00000581122 1660 ntTSL 5 BASIC17.07■□□□□ 0.32
CPNE4Q96A23 DISC1-215ENST00000602281 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
CPNE4Q96A23 CASTOR1-202ENST00000407689 1623 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CPNE4Q96A23 P2RY2-201ENST00000311131 2660 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CPNE4Q96A23 CDCA4-201ENST00000336219 2513 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CPNE4Q96A23 NAPA-210ENST00000595227 1460 ntTSL 3 BASIC17.07■□□□□ 0.32
CPNE4Q96A23 CYP2D6-201ENST00000359033 1433 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
CPNE4Q96A23 TMEM198-202ENST00000373883 2218 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CPNE4Q96A23 ANTXR1-203ENST00000409829 2221 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
CPNE4Q96A23 MPC2-201ENST00000271373 798 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CPNE4Q96A23 FAM182B-202ENST00000376404 456 ntAPPRIS ALT2 BASIC17.07■□□□□ 0.32
CPNE4Q96A23 CA15P1-201ENST00000481698 905 ntBASIC17.07■□□□□ 0.32
CPNE4Q96A23 AC098864.1-204ENST00000513752 805 ntTSL 4 BASIC17.07■□□□□ 0.32
CPNE4Q96A23 ANK1-211ENST00000522231 1060 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
CPNE4Q96A23 ANK1-212ENST00000522543 1160 ntTSL 2 BASIC17.07■□□□□ 0.32
CPNE4Q96A23 CCDC28A-203ENST00000617445 1240 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CPNE4Q96A23 USP25-204ENST00000400183 5341 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
CPNE4Q96A23 PKD2-201ENST00000237596 5056 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CPNE4Q96A23 FBXL18-203ENST00000453700 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
CPNE4Q96A23 BIRC2-206ENST00000530675 1927 ntTSL 2 BASIC17.07■□□□□ 0.32
CPNE4Q96A23 PCID2-202ENST00000337344 1898 ntAPPRIS P1 TSL 2 BASIC17.07■□□□□ 0.32
CPNE4Q96A23 NCK2-205ENST00000451463 1795 ntTSL 2 BASIC17.07■□□□□ 0.32
CPNE4Q96A23 SELENOF-207ENST00000611507 1785 ntTSL 5 BASIC17.07■□□□□ 0.32
CPNE4Q96A23 CADPS2-202ENST00000334010 6045 ntAPPRIS ALT2 TSL 5 BASIC17.07■□□□□ 0.32
CPNE4Q96A23 KRT1-201ENST00000252244 2451 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CPNE4Q96A23 FOXC2-201ENST00000320354 2478 ntAPPRIS P1 BASIC17.07■□□□□ 0.32
CPNE4Q96A23 RRS1-201ENST00000320270 1706 ntAPPRIS P1 BASIC17.07■□□□□ 0.32
CPNE4Q96A23 KTI12-201ENST00000371614 1714 ntAPPRIS P1 BASIC17.07■□□□□ 0.32
CPNE4Q96A23 DMRT2-205ENST00000382255 2367 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
CPNE4Q96A23 NRP2-206ENST00000417189 2386 ntTSL 2 BASIC17.07■□□□□ 0.32
CPNE4Q96A23 USP21-203ENST00000368002 2342 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CPNE4Q96A23 CYP2A7-202ENST00000301146 2281 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
CPNE4Q96A23 MOGS-201ENST00000233616 2895 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
CPNE4Q96A23 ANXA8L1-201ENST00000584982 2174 ntTSL 2 BASIC17.06■□□□□ 0.32
CPNE4Q96A23 TSHZ3-201ENST00000240587 5176 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CPNE4Q96A23 CYP2E1-205ENST00000463117 1912 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
CPNE4Q96A23 LTBP3-217ENST00000530785 2461 ntTSL 2 BASIC17.06■□□□□ 0.32
CPNE4Q96A23 ANGPTL4-201ENST00000301455 1879 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CPNE4Q96A23 CORO1B-201ENST00000341356 1881 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CPNE4Q96A23 DHRS11-210ENST00000611337 1341 ntTSL 5 BASIC17.06■□□□□ 0.32
CPNE4Q96A23 AC141586.3-201ENST00000562166 1838 ntBASIC17.06■□□□□ 0.32
CPNE4Q96A23 MED25-201ENST00000312865 2332 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CPNE4Q96A23 CACYBP-202ENST00000405362 1059 ntTSL 5 BASIC17.06■□□□□ 0.32
CPNE4Q96A23 SMIM1-201ENST00000444870 546 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CPNE4Q96A23 IKBKB-210ENST00000518983 447 ntTSL 2 BASIC17.06■□□□□ 0.32
CPNE4Q96A23 HRASLS5-205ENST00000539221 1167 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
CPNE4Q96A23 AC008763.3-201ENST00000597959 777 ntAPPRIS P1 TSL 4 BASIC17.06■□□□□ 0.32
CPNE4Q96A23 MRGPRF-201ENST00000309099 2295 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CPNE4Q96A23 GJB3-202ENST00000373366 2217 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CPNE4Q96A23 HCK-206ENST00000518730 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
CPNE4Q96A23 AL032819.2-201ENST00000624543 2162 ntBASIC17.06■□□□□ 0.32
CPNE4Q96A23 MEN1-202ENST00000315422 3148 ntAPPRIS ALT1 TSL 5 BASIC17.06■□□□□ 0.32
CPNE4Q96A23 RIMBP3C-201ENST00000331505 5475 ntAPPRIS ALT2 BASIC17.06■□□□□ 0.32
CPNE4Q96A23 GAL3ST1-206ENST00000406955 1635 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CPNE4Q96A23 TLE3-226ENST00000627388 5742 ntAPPRIS ALT1 TSL 5 BASIC17.06■□□□□ 0.32
CPNE4Q96A23 UBXN2A-201ENST00000309033 6066 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CPNE4Q96A23 LMNB1-202ENST00000395354 1572 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
CPNE4Q96A23 ZNF385C-201ENST00000436535 1572 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
CPNE4Q96A23 MLF2-201ENST00000203630 1969 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
CPNE4Q96A23 EOMES-202ENST00000449599 2829 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
CPNE4Q96A23 CORO1B-202ENST00000393893 1931 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
CPNE4Q96A23 PCDHA2-203ENST00000526136 5254 ntAPPRIS P2 TSL 1 (best) BASIC17.05■□□□□ 0.32
CPNE4Q96A23 GAS2L1P1-201ENST00000420145 1480 ntBASIC17.05■□□□□ 0.32
CPNE4Q96A23 AC004890.2-202ENST00000463462 1494 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
CPNE4Q96A23 ULK3-217ENST00000568667 1470 ntTSL 5 BASIC17.05■□□□□ 0.32
CPNE4Q96A23 ATP6V0E2-203ENST00000456496 2722 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
CPNE4Q96A23 ATP6V0E2-213ENST00000615196 2727 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
CPNE4Q96A23 TP53BP2-202ENST00000391878 4741 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
CPNE4Q96A23 CAPN1-226ENST00000533820 3083 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
CPNE4Q96A23 NFKBIL1-201ENST00000376145 1401 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 60 ms