Protein–RNA interactions for Protein: Q92499

DDX1, ATP-dependent RNA helicase DDX1, humanhuman

Known RBP Predictions only

Length 740 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX1Q92499 TCP11-204ENST00000373979 1882 ntAPPRIS P3 TSL 5 BASIC20.3■□□□□ 0.84
DDX1Q92499 PLIN2-201ENST00000276914 1972 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
DDX1Q92499 LINC00511-201ENST00000453722 1716 ntTSL 2 BASIC20.3■□□□□ 0.84
DDX1Q92499 TSPAN4-204ENST00000397404 1462 ntAPPRIS P1 TSL 5 BASIC20.3■□□□□ 0.84
DDX1Q92499 GHDC-212ENST00000593209 1827 ntTSL 5 BASIC20.3■□□□□ 0.84
DDX1Q92499 CYP46A1-202ENST00000380228 1597 ntTSL 2 BASIC20.29■□□□□ 0.84
DDX1Q92499 AC027031.2-201ENST00000521369 1318 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
DDX1Q92499 ISOC1-201ENST00000173527 1940 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
DDX1Q92499 KRT8P11-201ENST00000409686 1436 ntBASIC20.29■□□□□ 0.84
DDX1Q92499 AGAP4-201ENST00000311652 2715 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
DDX1Q92499 TCTN1-223ENST00000550703 2149 ntTSL 2 BASIC20.29■□□□□ 0.84
DDX1Q92499 DNAL4-201ENST00000216068 1504 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
DDX1Q92499 RFC2-213ENST00000621097 1635 ntTSL 5 BASIC20.29■□□□□ 0.84
DDX1Q92499 TMEM223-201ENST00000307366 1288 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
DDX1Q92499 UBE2C-204ENST00000356455 850 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
DDX1Q92499 RXFP4-201ENST00000368318 1240 ntAPPRIS P1 BASIC20.29■□□□□ 0.84
DDX1Q92499 TMSB4X-201ENST00000380633 495 ntAPPRIS P1 TSL 3 BASIC20.29■□□□□ 0.84
DDX1Q92499 AL353807.1-201ENST00000427475 662 ntBASIC20.29■□□□□ 0.84
DDX1Q92499 RNF146-204ENST00000476956 884 ntTSL 2 BASIC20.29■□□□□ 0.84
DDX1Q92499 LINC02167-201ENST00000562769 594 ntTSL 3 BASIC20.29■□□□□ 0.84
DDX1Q92499 YAP1-202ENST00000345877 5284 ntTSL 5 BASIC20.29■□□□□ 0.84
DDX1Q92499 PODXL2-201ENST00000342480 2186 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
DDX1Q92499 AL138781.2-201ENST00000617896 1843 ntBASIC20.29■□□□□ 0.84
DDX1Q92499 RHBDL1-201ENST00000219551 1560 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
DDX1Q92499 PRR5-ARHGAP8-201ENST00000352766 2043 ntAPPRIS P1 TSL 2 BASIC20.29■□□□□ 0.84
DDX1Q92499 PTGIR-201ENST00000291294 2107 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
DDX1Q92499 FAM131A-204ENST00000418281 1664 ntTSL 5 BASIC20.29■□□□□ 0.84
DDX1Q92499 DIP2A-203ENST00000435722 2760 ntTSL 2 BASIC20.29■□□□□ 0.84
DDX1Q92499 HOXD12-202ENST00000406506 1318 ntAPPRIS P1 TSL 3 BASIC20.28■□□□□ 0.84
DDX1Q92499 IL10RB-201ENST00000290200 1963 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
DDX1Q92499 ZNF768-202ENST00000562803 1999 ntAPPRIS ALT2 TSL 3 BASIC20.28■□□□□ 0.84
DDX1Q92499 REPS2-202ENST00000357277 7953 ntAPPRIS P3 TSL 1 (best) BASIC20.28■□□□□ 0.84
DDX1Q92499 LINC01819-201ENST00000422351 2156 ntTSL 5 BASIC20.28■□□□□ 0.84
DDX1Q92499 AC007743.1-203ENST00000447423 1623 ntTSL 2 BASIC20.28■□□□□ 0.84
DDX1Q92499 CYP2D7-203ENST00000433992 1740 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
DDX1Q92499 CYP2D7-207ENST00000612115 1734 ntAPPRIS P1 TSL 5 BASIC20.28■□□□□ 0.84
DDX1Q92499 OCSTAMP-201ENST00000279028 2043 ntAPPRIS P1 TSL 5 BASIC20.28■□□□□ 0.84
DDX1Q92499 MSGN1-201ENST00000281047 606 ntAPPRIS P1 BASIC20.28■□□□□ 0.84
DDX1Q92499 LGALS7B-201ENST00000314980 483 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
DDX1Q92499 BSX-201ENST00000343035 830 ntAPPRIS P1 TSL 5 BASIC20.28■□□□□ 0.84
DDX1Q92499 MDK-201ENST00000359803 985 ntAPPRIS P2 TSL 2 BASIC20.28■□□□□ 0.84
DDX1Q92499 BABAM1-202ENST00000447614 930 ntAPPRIS ALT2 TSL 5 BASIC20.28■□□□□ 0.84
DDX1Q92499 AC008040.2-201ENST00000461049 708 ntBASIC20.28■□□□□ 0.84
DDX1Q92499 AC091390.4-202ENST00000476426 537 ntBASIC20.28■□□□□ 0.84
DDX1Q92499 SLC25A11-202ENST00000544061 952 ntTSL 3 BASIC20.28■□□□□ 0.84
DDX1Q92499 TNNT1-208ENST00000587465 1065 ntAPPRIS ALT2 TSL 5 BASIC20.28■□□□□ 0.84
DDX1Q92499 DNAJC28-204ENST00000617313 2237 ntAPPRIS P1 TSL 5 BASIC20.28■□□□□ 0.84
DDX1Q92499 RCC2P6-201ENST00000526625 1557 ntBASIC20.28■□□□□ 0.84
DDX1Q92499 AC093525.10-201ENST00000625130 1569 ntBASIC20.28■□□□□ 0.84
DDX1Q92499 GIT1-201ENST00000225394 3768 ntAPPRIS P3 TSL 1 (best) BASIC20.28■□□□□ 0.84
DDX1Q92499 CD7-206ENST00000583376 1659 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
DDX1Q92499 GRK6-201ENST00000355472 2939 ntAPPRIS P3 TSL 1 (best) BASIC20.28■□□□□ 0.84
DDX1Q92499 P2RX5-203ENST00000547178 1998 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
DDX1Q92499 ANKRD24-201ENST00000262970 3711 ntAPPRIS ALT2 TSL 5 BASIC20.28■□□□□ 0.84
DDX1Q92499 CERS5-203ENST00000422340 2855 ntAPPRIS ALT2 TSL 2 BASIC20.28■□□□□ 0.84
DDX1Q92499 FAM99A-201ENST00000382167 1432 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
DDX1Q92499 KRT16P1-201ENST00000399124 1418 ntBASIC20.27■□□□□ 0.84
DDX1Q92499 PTGER3-209ENST00000460330 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
DDX1Q92499 NR2F1-205ENST00000615873 1427 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
DDX1Q92499 FN3KRP-201ENST00000269373 1849 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
DDX1Q92499 LRP8-204ENST00000371454 3322 ntAPPRIS ALT2 TSL 1 (best) BASIC20.27■□□□□ 0.84
DDX1Q92499 MEN1-201ENST00000312049 2761 ntAPPRIS ALT1 TSL 1 (best) BASIC20.27■□□□□ 0.84
DDX1Q92499 TULP1-201ENST00000229771 2162 ntAPPRIS P2 TSL 1 (best) BASIC20.27■□□□□ 0.84
DDX1Q92499 CBSL-210ENST00000624934 1992 ntTSL 5 BASIC20.27■□□□□ 0.84
DDX1Q92499 PLA2G7-201ENST00000274793 1882 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
DDX1Q92499 AL031598.1-201ENST00000561511 1773 ntBASIC20.27■□□□□ 0.84
DDX1Q92499 RBFOX1-204ENST00000422070 1684 ntTSL 2 BASIC20.27■□□□□ 0.84
DDX1Q92499 C1QBP-201ENST00000225698 1169 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
DDX1Q92499 CENPA-201ENST00000233505 1299 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
DDX1Q92499 CTAG2-201ENST00000247306 993 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
DDX1Q92499 ACP1-205ENST00000407983 703 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
DDX1Q92499 ROPN1L-202ENST00000503804 1291 ntAPPRIS P1 TSL 2 BASIC20.27■□□□□ 0.84
DDX1Q92499 AC073195.1-201ENST00000607241 877 ntBASIC20.27■□□□□ 0.84
DDX1Q92499 PARS2-201ENST00000371279 2347 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
DDX1Q92499 SEMA3D-202ENST00000444867 1605 ntTSL 1 (best) BASIC20.27■□□□□ 0.83
DDX1Q92499 KCNIP4-206ENST00000447367 1641 ntTSL 5 BASIC20.27■□□□□ 0.83
DDX1Q92499 RIPK2-201ENST00000220751 2584 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
DDX1Q92499 TEPSIN-201ENST00000300714 2287 ntAPPRIS P2 TSL 1 (best) BASIC20.27■□□□□ 0.83
DDX1Q92499 ADAP2-201ENST00000330889 2934 ntAPPRIS P2 TSL 1 (best) BASIC20.26■□□□□ 0.83
DDX1Q92499 FAM189B-204ENST00000368368 2609 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
DDX1Q92499 GCDH-216ENST00000591470 1867 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
DDX1Q92499 AIPL1-209ENST00000575265 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
DDX1Q92499 NKX1-2-201ENST00000451024 3364 ntAPPRIS P1 TSL 5 BASIC20.26■□□□□ 0.83
DDX1Q92499 LINC01743-201ENST00000366308 964 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
DDX1Q92499 NDUFA13-201ENST00000428459 576 ntTSL 2 BASIC20.26■□□□□ 0.83
DDX1Q92499 ADAMTS19-AS1-201ENST00000502827 786 ntTSL 4 BASIC20.26■□□□□ 0.83
DDX1Q92499 AMN1-211ENST00000541931 880 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
DDX1Q92499 AL355075.4-201ENST00000554988 638 ntBASIC20.26■□□□□ 0.83
DDX1Q92499 AC015712.2-203ENST00000560461 688 ntTSL 3 BASIC20.26■□□□□ 0.83
DDX1Q92499 AC113410.3-201ENST00000623366 203 ntBASIC20.26■□□□□ 0.83
DDX1Q92499 CR392000.1-201ENST00000624770 1228 ntBASIC20.26■□□□□ 0.83
DDX1Q92499 FAM72C-202ENST00000584486 2297 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
DDX1Q92499 FBXO24-202ENST00000427939 2087 ntTSL 2 BASIC20.26■□□□□ 0.83
DDX1Q92499 CDC14B-203ENST00000375242 2965 ntTSL 2 BASIC20.26■□□□□ 0.83
DDX1Q92499 PPP1R3F-202ENST00000376188 2443 ntTSL 2 BASIC20.26■□□□□ 0.83
DDX1Q92499 CCDC106-201ENST00000308964 1546 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
DDX1Q92499 SUMF2-202ENST00000342190 1876 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
DDX1Q92499 GPRIN2-201ENST00000374314 1696 ntAPPRIS P1 BASIC20.26■□□□□ 0.83
DDX1Q92499 TRIM47-201ENST00000254816 2266 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
DDX1Q92499 LARGE2-208ENST00000531526 2528 ntAPPRIS P3 TSL 2 BASIC20.25■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 64.5 ms