Protein–RNA interactions for Protein: Q8NFU0

BEST4, Bestrophin-4, humanhuman

Predictions only

Length 473 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BEST4Q8NFU0 ITGA8-201ENST00000378076 6755 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
BEST4Q8NFU0 BST1-202ENST00000382346 1993 ntAPPRIS ALT2 TSL 5 BASIC16.42■□□□□ 0.22
BEST4Q8NFU0 ARNTL-205ENST00000403510 2745 ntTSL 2 BASIC16.42■□□□□ 0.22
BEST4Q8NFU0 RUNX1-207ENST00000437180 5967 ntAPPRIS P3 TSL 5 BASIC16.42■□□□□ 0.22
BEST4Q8NFU0 IL4I1-202ENST00000391826 1863 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
BEST4Q8NFU0 RAB40C-205ENST00000539661 2609 ntAPPRIS P1 TSL 3 BASIC16.42■□□□□ 0.22
BEST4Q8NFU0 AC009053.2-201ENST00000563701 2365 ntBASIC16.42■□□□□ 0.22
BEST4Q8NFU0 WBP2-219ENST00000626827 1867 ntTSL 5 BASIC16.42■□□□□ 0.22
BEST4Q8NFU0 MEPCE-202ENST00000414441 2261 ntTSL 2 BASIC16.42■□□□□ 0.22
BEST4Q8NFU0 UQCC3-202ENST00000531323 2288 ntAPPRIS P1 TSL 3 BASIC16.42■□□□□ 0.22
BEST4Q8NFU0 TRIM50-201ENST00000333149 2047 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
BEST4Q8NFU0 PHKA2-201ENST00000379942 5559 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
BEST4Q8NFU0 TRIQK-221ENST00000524107 737 ntAPPRIS P1 TSL 3 BASIC16.42■□□□□ 0.22
BEST4Q8NFU0 DHRS4L2-204ENST00000537912 918 ntTSL 2 BASIC16.42■□□□□ 0.22
BEST4Q8NFU0 CD99-212ENST00000624481 1089 ntAPPRIS ALT2 TSL 2 BASIC16.42■□□□□ 0.22
BEST4Q8NFU0 TNFRSF11A-207ENST00000639222 855 ntAPPRIS ALT2 TSL 5 BASIC16.42■□□□□ 0.22
BEST4Q8NFU0 DISC1-224ENST00000639374 1071 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.22
BEST4Q8NFU0 CLDND1-203ENST00000394181 2170 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
BEST4Q8NFU0 WASF1-202ENST00000359451 3075 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
BEST4Q8NFU0 C12orf65-202ENST00000366329 1901 ntAPPRIS P2 TSL 2 BASIC16.42■□□□□ 0.22
BEST4Q8NFU0 MMEL1-201ENST00000378412 2849 ntAPPRIS P1 TSL 2 BASIC16.42■□□□□ 0.22
BEST4Q8NFU0 CD7-206ENST00000583376 1659 ntTSL 1 (best) BASIC16.42■□□□□ 0.22
BEST4Q8NFU0 SOST-201ENST00000301691 2300 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
BEST4Q8NFU0 GRAMD2B-218ENST00000542322 2977 ntTSL 2 BASIC16.42■□□□□ 0.22
BEST4Q8NFU0 TMEM198-201ENST00000344458 2393 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
BEST4Q8NFU0 DCLK1-203ENST00000379892 2101 ntTSL 5 BASIC16.42■□□□□ 0.22
BEST4Q8NFU0 ZNF454-202ENST00000519564 2142 ntAPPRIS P1 TSL 2 BASIC16.42■□□□□ 0.22
BEST4Q8NFU0 KCNB1-203ENST00000635465 4114 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
BEST4Q8NFU0 SPEG-203ENST00000396688 1457 ntTSL 3 BASIC16.42■□□□□ 0.22
BEST4Q8NFU0 ATXN2-227ENST00000616825 4575 ntAPPRIS ALT2 TSL 5 BASIC16.41■□□□□ 0.22
BEST4Q8NFU0 TUBG1-201ENST00000251413 1611 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
BEST4Q8NFU0 GSR-201ENST00000221130 3119 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
BEST4Q8NFU0 NRBP2-202ENST00000442628 3587 ntAPPRIS P1 TSL 2 BASIC16.41■□□□□ 0.22
BEST4Q8NFU0 DAG1-201ENST00000308775 5522 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
BEST4Q8NFU0 SPAG6-203ENST00000376624 2605 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
BEST4Q8NFU0 DIAPH2-205ENST00000373061 4983 ntAPPRIS ALT2 TSL 5 BASIC16.41■□□□□ 0.22
BEST4Q8NFU0 PPM1D-204ENST00000629650 1525 ntTSL 5 BASIC16.41■□□□□ 0.22
BEST4Q8NFU0 SPRYD7-201ENST00000361840 3053 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
BEST4Q8NFU0 CD24-204ENST00000619133 2513 ntAPPRIS P3 TSL 2 BASIC16.41■□□□□ 0.22
BEST4Q8NFU0 AC141586.3-201ENST00000562166 1838 ntBASIC16.41■□□□□ 0.22
BEST4Q8NFU0 ASXL1-202ENST00000375687 7031 ntAPPRIS P2 TSL 5 BASIC16.41■□□□□ 0.22
BEST4Q8NFU0 NCK1-207ENST00000481752 1971 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
BEST4Q8NFU0 GJA3-201ENST00000241125 5211 ntAPPRIS P1 TSL 3 BASIC16.41■□□□□ 0.22
BEST4Q8NFU0 HCFC1R1-201ENST00000248089 965 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
BEST4Q8NFU0 CBFB-202ENST00000412916 2971 ntAPPRIS ALT1 TSL 1 (best) BASIC16.41■□□□□ 0.22
BEST4Q8NFU0 FTCDNL1-202ENST00000420128 1021 ntTSL 5 BASIC16.41■□□□□ 0.22
BEST4Q8NFU0 RASGEF1B-208ENST00000510780 539 ntTSL 3 BASIC16.41■□□□□ 0.22
BEST4Q8NFU0 RASGEF1B-209ENST00000512343 498 ntTSL 3 BASIC16.41■□□□□ 0.22
BEST4Q8NFU0 AC023632.3-201ENST00000521633 145 ntBASIC16.41■□□□□ 0.22
BEST4Q8NFU0 SLC25A29-212ENST00000555927 960 ntTSL 2 BASIC16.41■□□□□ 0.22
BEST4Q8NFU0 LINC01956-201ENST00000557729 695 ntTSL 5 BASIC16.41■□□□□ 0.22
BEST4Q8NFU0 AC106738.2-202ENST00000558156 533 ntTSL 4 BASIC16.41■□□□□ 0.22
BEST4Q8NFU0 AC140479.5-201ENST00000568189 735 ntTSL 3 BASIC16.41■□□□□ 0.22
BEST4Q8NFU0 PLLP-204ENST00000569059 665 ntTSL 3 BASIC16.41■□□□□ 0.22
BEST4Q8NFU0 HCFC1R1-207ENST00000574980 845 ntTSL 5 BASIC16.41■□□□□ 0.22
BEST4Q8NFU0 JOSD2-205ENST00000601423 802 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
BEST4Q8NFU0 BRWD1-AS2-201ENST00000603064 1028 ntBASIC16.41■□□□□ 0.22
BEST4Q8NFU0 ATP10A-207ENST00000619904 988 ntTSL 5 BASIC16.41■□□□□ 0.22
BEST4Q8NFU0 SPATS2L-218ENST00000451764 2250 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
BEST4Q8NFU0 DBNDD2-203ENST00000372710 1417 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
BEST4Q8NFU0 LMNB1-202ENST00000395354 1572 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
BEST4Q8NFU0 SETD7-202ENST00000404104 1590 ntTSL 2 BASIC16.41■□□□□ 0.22
BEST4Q8NFU0 AC093525.10-201ENST00000625130 1569 ntBASIC16.41■□□□□ 0.22
BEST4Q8NFU0 SLC2A5-201ENST00000377414 2344 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
BEST4Q8NFU0 COL4A3BP-203ENST00000380494 5651 ntTSL 2 BASIC16.41■□□□□ 0.22
BEST4Q8NFU0 EDA-204ENST00000374553 5272 ntAPPRIS ALT1 TSL 1 (best) BASIC16.41■□□□□ 0.22
BEST4Q8NFU0 CFAP77-203ENST00000393216 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC16.41■□□□□ 0.22
BEST4Q8NFU0 CHRNA10-201ENST00000250699 1945 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
BEST4Q8NFU0 USP39-202ENST00000409025 1946 ntTSL 5 BASIC16.41■□□□□ 0.22
BEST4Q8NFU0 ATRIP-202ENST00000346691 2509 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
BEST4Q8NFU0 PCOLCE-AS1-201ENST00000442166 2537 ntTSL 2 BASIC16.41■□□□□ 0.22
BEST4Q8NFU0 TCIRG1-201ENST00000265686 2677 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
BEST4Q8NFU0 TRIM9-201ENST00000298355 5284 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
BEST4Q8NFU0 TRPV4-208ENST00000544971 2295 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
BEST4Q8NFU0 TMEM191A-208ENST00000450925 1961 ntTSL 2 BASIC16.4■□□□□ 0.22
BEST4Q8NFU0 KRT14-201ENST00000167586 1662 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
BEST4Q8NFU0 ENTPD2-201ENST00000312665 1500 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
BEST4Q8NFU0 BCR-201ENST00000305877 7082 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
BEST4Q8NFU0 EML2-203ENST00000536630 2791 ntAPPRIS ALT2 TSL 2 BASIC16.4■□□□□ 0.22
BEST4Q8NFU0 MEST-201ENST00000223215 2465 ntAPPRIS P4 TSL 1 (best) BASIC16.4■□□□□ 0.22
BEST4Q8NFU0 SLC39A7-201ENST00000374675 2153 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
BEST4Q8NFU0 PRORSD1P-202ENST00000563365 2154 ntBASIC16.4■□□□□ 0.22
BEST4Q8NFU0 BIRC8-201ENST00000426466 2026 ntAPPRIS P1 BASIC16.4■□□□□ 0.22
BEST4Q8NFU0 ARID3A-201ENST00000263620 5941 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
BEST4Q8NFU0 PRDM11-201ENST00000424263 1858 ntAPPRIS P3 TSL 2 BASIC16.4■□□□□ 0.22
BEST4Q8NFU0 RIN1-201ENST00000311320 2693 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
BEST4Q8NFU0 KCNT1-202ENST00000371757 4717 ntAPPRIS P3 TSL 1 (best) BASIC16.4■□□□□ 0.22
BEST4Q8NFU0 EGFR-204ENST00000420316 1570 ntTSL 1 (best) BASIC16.4■□□□□ 0.22
BEST4Q8NFU0 RASGRP2-203ENST00000377486 667 ntTSL 3 BASIC16.4■□□□□ 0.22
BEST4Q8NFU0 MIF4GD-211ENST00000580571 952 ntTSL 2 BASIC16.4■□□□□ 0.22
BEST4Q8NFU0 ACTR8-202ENST00000482349 2091 ntTSL 2 BASIC16.4■□□□□ 0.22
BEST4Q8NFU0 UPP1-201ENST00000331803 1932 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
BEST4Q8NFU0 BRPF1-203ENST00000424362 4712 ntAPPRIS ALT1 TSL 1 (best) BASIC16.4■□□□□ 0.22
BEST4Q8NFU0 MORF4L1-215ENST00000559345 1468 ntTSL 2 BASIC16.4■□□□□ 0.22
BEST4Q8NFU0 GMPPA-213ENST00000622191 1473 ntTSL 5 BASIC16.4■□□□□ 0.22
BEST4Q8NFU0 PCDHA8-201ENST00000378123 2616 ntAPPRIS ALT2 BASIC16.4■□□□□ 0.22
BEST4Q8NFU0 GBGT1-203ENST00000372040 1980 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
BEST4Q8NFU0 AL512353.2-201ENST00000448759 1962 ntBASIC16.4■□□□□ 0.22
BEST4Q8NFU0 CT47B1-201ENST00000371311 1328 ntAPPRIS P1 TSL 5 BASIC16.4■□□□□ 0.22
BEST4Q8NFU0 MADD-208ENST00000405573 1823 ntTSL 5 BASIC16.4■□□□□ 0.22
Retrieved 100 of 98,524 protein–RNA pairs in 31.3 ms