Protein–RNA interactions for Protein: Q8NFH5

NUP35, Nucleoporin NUP53, humanhuman

Predictions only

Length 326 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUP35Q8NFH5 GALK1-201ENST00000225614 1445 ntAPPRIS P1 TSL 2 BASIC14.24□□□□□ -0.13
NUP35Q8NFH5 USP45-202ENST00000329966 1444 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
NUP35Q8NFH5 HLA-G-201ENST00000360323 1427 ntAPPRIS P2 BASIC14.24□□□□□ -0.13
NUP35Q8NFH5 MCM9-201ENST00000316068 2442 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
NUP35Q8NFH5 FHL1-205ENST00000370690 2441 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
NUP35Q8NFH5 GPR35-204ENST00000430267 1399 ntAPPRIS ALT2 TSL 5 BASIC14.24□□□□□ -0.13
NUP35Q8NFH5 C14orf180-202ENST00000410013 2009 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
NUP35Q8NFH5 ZCCHC17-205ENST00000615916 1652 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
NUP35Q8NFH5 NDRG2-227ENST00000554143 1980 ntAPPRIS ALT1 TSL 2 BASIC14.24□□□□□ -0.13
NUP35Q8NFH5 RIPK2-201ENST00000220751 2584 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
NUP35Q8NFH5 MIF-201ENST00000215754 939 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
NUP35Q8NFH5 LARP6-202ENST00000344870 527 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
NUP35Q8NFH5 PRSS3-202ENST00000361005 966 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
NUP35Q8NFH5 ZDHHC16-205ENST00000370846 1280 ntTSL 3 BASIC14.24□□□□□ -0.13
NUP35Q8NFH5 EBPL-204ENST00000378272 766 ntTSL 3 BASIC14.24□□□□□ -0.13
NUP35Q8NFH5 AL136116.3-201ENST00000402907 1138 ntBASIC14.24□□□□□ -0.13
NUP35Q8NFH5 LINC01659-202ENST00000449711 917 ntTSL 3 BASIC14.24□□□□□ -0.13
NUP35Q8NFH5 COL19A1-203ENST00000478620 589 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
NUP35Q8NFH5 AP2S1-207ENST00000599990 829 ntAPPRIS ALT1 TSL 2 BASIC14.24□□□□□ -0.13
NUP35Q8NFH5 SYNGR3-206ENST00000618464 1213 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
NUP35Q8NFH5 TAF4B-201ENST00000269142 5260 ntAPPRIS P3 TSL 1 (best) BASIC14.24□□□□□ -0.13
NUP35Q8NFH5 KLHL35-201ENST00000376292 1500 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
NUP35Q8NFH5 UBQLN4P1-201ENST00000461599 1801 ntBASIC14.24□□□□□ -0.13
NUP35Q8NFH5 TCP11-228ENST00000611141 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC14.24□□□□□ -0.13
NUP35Q8NFH5 PIGZ-202ENST00000412723 2701 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
NUP35Q8NFH5 SEPHS1-202ENST00000378614 2387 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
NUP35Q8NFH5 LEF1-203ENST00000438313 1488 ntAPPRIS ALT1 TSL 1 (best) BASIC14.24□□□□□ -0.13
NUP35Q8NFH5 AC018553.1-201ENST00000616682 1458 ntBASIC14.24□□□□□ -0.13
NUP35Q8NFH5 SPAG6-203ENST00000376624 2605 ntAPPRIS P1 TSL 1 (best) BASIC14.24□□□□□ -0.13
NUP35Q8NFH5 AC005498.3-201ENST00000596587 2045 ntTSL 1 (best) BASIC14.24□□□□□ -0.13
NUP35Q8NFH5 SPAG1-206ENST00000520643 1723 ntTSL 2 BASIC14.24□□□□□ -0.13
NUP35Q8NFH5 HEG1-201ENST00000311127 9156 ntAPPRIS P1 TSL 5 BASIC14.24□□□□□ -0.13
NUP35Q8NFH5 L1CAM-205ENST00000370060 5113 ntAPPRIS P4 TSL 5 BASIC14.24□□□□□ -0.13
NUP35Q8NFH5 FRMD4A-203ENST00000357447 6821 ntAPPRIS P2 TSL 1 (best) BASIC14.24□□□□□ -0.13
NUP35Q8NFH5 MATN4-205ENST00000537548 1991 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
NUP35Q8NFH5 RPS6KA5-201ENST00000418736 2249 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
NUP35Q8NFH5 COBL-210ENST00000632460 1941 ntTSL 5 BASIC14.23□□□□□ -0.13
NUP35Q8NFH5 KCNQ5-212ENST00000628967 3527 ntTSL 2 BASIC14.23□□□□□ -0.13
NUP35Q8NFH5 WSCD1-209ENST00000574232 2129 ntAPPRIS P1 TSL 5 BASIC14.23□□□□□ -0.13
NUP35Q8NFH5 DNAJB2-201ENST00000336576 3176 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
NUP35Q8NFH5 PDLIM7-203ENST00000359895 1567 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
NUP35Q8NFH5 PSRC1-202ENST00000369904 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
NUP35Q8NFH5 C21orf91-203ENST00000400559 1593 ntAPPRIS ALT1 TSL 5 BASIC14.23□□□□□ -0.13
NUP35Q8NFH5 LANCL3-201ENST00000378619 3063 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
NUP35Q8NFH5 HR-201ENST00000312841 5351 ntTSL 5 BASIC14.23□□□□□ -0.13
NUP35Q8NFH5 FXYD7-201ENST00000270310 712 ntAPPRIS P2 TSL 1 (best) BASIC14.23□□□□□ -0.13
NUP35Q8NFH5 C5orf38-201ENST00000334000 890 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
NUP35Q8NFH5 C19orf12-205ENST00000392278 895 ntTSL 2 BASIC14.23□□□□□ -0.13
NUP35Q8NFH5 RALB-203ENST00000420510 1252 ntAPPRIS P1 TSL 2 BASIC14.23□□□□□ -0.13
NUP35Q8NFH5 AL137779.2-201ENST00000554859 448 ntTSL 2 BASIC14.23□□□□□ -0.13
NUP35Q8NFH5 AC145207.2-202ENST00000576554 565 ntTSL 5 BASIC14.23□□□□□ -0.13
NUP35Q8NFH5 AC104564.5-201ENST00000584986 278 ntTSL 3 BASIC14.23□□□□□ -0.13
NUP35Q8NFH5 AL136982.7-201ENST00000609363 465 ntTSL 4 BASIC14.23□□□□□ -0.13
NUP35Q8NFH5 GRAMD4P4-201ENST00000613563 1115 ntBASIC14.23□□□□□ -0.13
NUP35Q8NFH5 CD72-201ENST00000259633 1548 ntAPPRIS P2 TSL 1 (best) BASIC14.23□□□□□ -0.13
NUP35Q8NFH5 ALKBH6-213ENST00000486389 1525 ntTSL 3 BASIC14.23□□□□□ -0.13
NUP35Q8NFH5 CAMK2B-204ENST00000350811 2292 ntAPPRIS P4 TSL 2 BASIC14.23□□□□□ -0.13
NUP35Q8NFH5 HOOK2-202ENST00000397668 2513 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
NUP35Q8NFH5 TXNL4A-201ENST00000269601 3504 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
NUP35Q8NFH5 CACNA1A-215ENST00000635727 7536 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
NUP35Q8NFH5 GRAMD2B-218ENST00000542322 2977 ntTSL 2 BASIC14.23□□□□□ -0.13
NUP35Q8NFH5 LMNA-207ENST00000368301 2461 ntTSL 2 BASIC14.23□□□□□ -0.13
NUP35Q8NFH5 IL17RC-215ENST00000455057 2244 ntAPPRIS ALT2 TSL 1 (best) BASIC14.23□□□□□ -0.13
NUP35Q8NFH5 ABHD14A-ACY1-202ENST00000463937 1705 ntAPPRIS ALT2 TSL 5 BASIC14.23□□□□□ -0.13
NUP35Q8NFH5 MGLL-204ENST00000434178 4941 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
NUP35Q8NFH5 HAUS4-202ENST00000342454 1474 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
NUP35Q8NFH5 CHTOP-203ENST00000368690 2165 ntAPPRIS ALT1 TSL 1 (best) BASIC14.23□□□□□ -0.13
NUP35Q8NFH5 IL17RC-201ENST00000295981 2621 ntAPPRIS P4 TSL 2 BASIC14.23□□□□□ -0.13
NUP35Q8NFH5 TRAF3IP1-201ENST00000373327 4279 ntAPPRIS P3 TSL 1 (best) BASIC14.23□□□□□ -0.13
NUP35Q8NFH5 TXNRD3-202ENST00000523403 2351 ntAPPRIS ALT2 TSL 2 BASIC14.23□□□□□ -0.13
NUP35Q8NFH5 NSFL1C-206ENST00000476071 2800 ntTSL 5 BASIC14.23□□□□□ -0.13
NUP35Q8NFH5 HSD17B12-201ENST00000278353 2571 ntAPPRIS P1 TSL 1 (best) BASIC14.23□□□□□ -0.13
NUP35Q8NFH5 ICA1-201ENST00000265577 2309 ntAPPRIS ALT1 TSL 5 BASIC14.23□□□□□ -0.13
NUP35Q8NFH5 C2CD2L-205ENST00000528586 2320 ntTSL 2 BASIC14.23□□□□□ -0.13
NUP35Q8NFH5 DSCR9-201ENST00000454482 1644 ntTSL 1 (best) BASIC14.23□□□□□ -0.13
NUP35Q8NFH5 STAMBPL1-203ENST00000371926 2532 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
NUP35Q8NFH5 SDHAP1-207ENST00000440850 2000 ntBASIC14.22□□□□□ -0.13
NUP35Q8NFH5 WDR41-208ENST00000507029 1553 ntTSL 2 BASIC14.22□□□□□ -0.13
NUP35Q8NFH5 SRRM2-201ENST00000301740 9353 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
NUP35Q8NFH5 DVL2-209ENST00000575458 2659 ntAPPRIS ALT2 TSL 2 BASIC14.22□□□□□ -0.13
NUP35Q8NFH5 TRIM15-207ENST00000376694 2214 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
NUP35Q8NFH5 NR2F1-201ENST00000327111 3732 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
NUP35Q8NFH5 CDH22-203ENST00000537909 3902 ntAPPRIS P1 TSL 2 BASIC14.22□□□□□ -0.13
NUP35Q8NFH5 PRSS36-201ENST00000268281 2840 ntAPPRIS P3 TSL 1 (best) BASIC14.22□□□□□ -0.13
NUP35Q8NFH5 KSR1-201ENST00000268763 2806 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
NUP35Q8NFH5 ARHGAP22-205ENST00000417912 2352 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
NUP35Q8NFH5 CD1E-205ENST00000368160 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
NUP35Q8NFH5 GDF5OS-201ENST00000374375 1734 ntAPPRIS P1 TSL 2 BASIC14.22□□□□□ -0.13
NUP35Q8NFH5 PMAIP1-202ENST00000316660 1948 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
NUP35Q8NFH5 CLTB-201ENST00000310418 1215 ntAPPRIS P4 TSL 1 (best) BASIC14.22□□□□□ -0.13
NUP35Q8NFH5 GLTPD2-201ENST00000331264 1023 ntAPPRIS P1 TSL 1 (best) BASIC14.22□□□□□ -0.13
NUP35Q8NFH5 CLTB-202ENST00000345807 1161 ntAPPRIS ALT1 TSL 1 (best) BASIC14.22□□□□□ -0.13
NUP35Q8NFH5 U2AF1-202ENST00000380276 940 ntAPPRIS ALT2 TSL 1 (best) BASIC14.22□□□□□ -0.13
NUP35Q8NFH5 NRL-201ENST00000396995 810 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
NUP35Q8NFH5 WWTR1-AS1-203ENST00000495094 975 ntTSL 1 (best) BASIC14.22□□□□□ -0.13
NUP35Q8NFH5 PLEKHA2-206ENST00000521746 2127 ntTSL 5 BASIC14.22□□□□□ -0.13
NUP35Q8NFH5 AC083906.6-201ENST00000641366 219 ntBASIC14.22□□□□□ -0.13
NUP35Q8NFH5 CELF6-205ENST00000567083 1496 ntAPPRIS ALT2 TSL 2 BASIC14.22□□□□□ -0.13
NUP35Q8NFH5 SKOR1-204ENST00000554240 3597 ntAPPRIS ALT2 TSL 5 BASIC14.22□□□□□ -0.13
NUP35Q8NFH5 BFSP1-205ENST00000536626 2075 ntTSL 2 BASIC14.22□□□□□ -0.13
Retrieved 100 of 98,524 protein–RNA pairs in 31.8 ms