Protein–RNA interactions for Protein: Q8NC44

RETREG2, Reticulophagy regulator 2, humanhuman

Predictions only

Length 543 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RETREG2Q8NC44 LINC01381-201ENST00000431650 466 ntTSL 3 BASIC21.54■■□□□ 1.04
RETREG2Q8NC44 AC012618.3-202ENST00000440004 472 ntTSL 4 BASIC21.54■■□□□ 1.04
RETREG2Q8NC44 ALKAL1-202ENST00000523939 536 ntAPPRIS ALT2 TSL 1 (best) BASIC21.54■■□□□ 1.04
RETREG2Q8NC44 MOK-234ENST00000524370 1165 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
RETREG2Q8NC44 AP003501.2-201ENST00000524433 477 ntTSL 4 BASIC21.54■■□□□ 1.04
RETREG2Q8NC44 SSSCA1-206ENST00000531405 879 ntTSL 2 BASIC21.54■■□□□ 1.04
RETREG2Q8NC44 AL929554.1-201ENST00000568665 460 ntAPPRIS P1 TSL 3 BASIC21.54■■□□□ 1.04
RETREG2Q8NC44 AC139887.4-201ENST00000607877 719 ntBASIC21.54■■□□□ 1.04
RETREG2Q8NC44 TPGS2-221ENST00000614939 1268 ntTSL 4 BASIC21.54■■□□□ 1.04
RETREG2Q8NC44 KAZN-209ENST00000636564 1197 ntTSL 5 BASIC21.54■■□□□ 1.04
RETREG2Q8NC44 ZNF398-202ENST00000475153 2860 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
RETREG2Q8NC44 FGF17-201ENST00000359441 1714 ntAPPRIS P1 TSL 1 (best) BASIC21.54■■□□□ 1.04
RETREG2Q8NC44 EARS2-206ENST00000563232 1709 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
RETREG2Q8NC44 FAR2P2-204ENST00000424873 2070 ntTSL 2 BASIC21.54■■□□□ 1.04
RETREG2Q8NC44 RASSF1-202ENST00000357043 1864 ntAPPRIS P3 TSL 1 (best) BASIC21.54■■□□□ 1.04
RETREG2Q8NC44 DDAH2-211ENST00000375787 1330 ntAPPRIS P1 TSL 5 BASIC21.54■■□□□ 1.04
RETREG2Q8NC44 ISLR2-202ENST00000419208 2306 ntTSL 1 (best) BASIC21.54■■□□□ 1.04
RETREG2Q8NC44 GLRB-207ENST00000541722 2765 ntTSL 5 BASIC21.53■■□□□ 1.04
RETREG2Q8NC44 PTBP1-220ENST00000627714 2201 ntTSL 5 BASIC21.53■■□□□ 1.04
RETREG2Q8NC44 DISC1-204ENST00000366633 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC21.53■■□□□ 1.04
RETREG2Q8NC44 DISC1-214ENST00000539444 2658 ntAPPRIS ALT2 TSL 1 (best) BASIC21.53■■□□□ 1.04
RETREG2Q8NC44 SEPT6-202ENST00000354228 1576 ntAPPRIS P4 TSL 1 (best) BASIC21.53■■□□□ 1.04
RETREG2Q8NC44 TNXA-203ENST00000507684 2038 ntBASIC21.53■■□□□ 1.04
RETREG2Q8NC44 RAB5C-202ENST00000393860 1912 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
RETREG2Q8NC44 RAX-202ENST00000334889 3197 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
RETREG2Q8NC44 CA11-201ENST00000084798 1844 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
RETREG2Q8NC44 ANXA8L1-201ENST00000584982 2174 ntTSL 2 BASIC21.53■■□□□ 1.04
RETREG2Q8NC44 TMSB4X-203ENST00000380636 1702 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
RETREG2Q8NC44 BRSK1-202ENST00000326848 2095 ntTSL 5 BASIC21.53■■□□□ 1.04
RETREG2Q8NC44 NR5A1-202ENST00000373588 3104 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
RETREG2Q8NC44 PSEN1-203ENST00000394157 1249 ntTSL 2 BASIC21.53■■□□□ 1.04
RETREG2Q8NC44 EEF1D-202ENST00000395119 1249 ntAPPRIS ALT2 TSL 1 (best) BASIC21.53■■□□□ 1.04
RETREG2Q8NC44 SLC25A1P2-201ENST00000430693 912 ntBASIC21.53■■□□□ 1.04
RETREG2Q8NC44 PTPA-216ENST00000432651 857 ntTSL 2 BASIC21.53■■□□□ 1.04
RETREG2Q8NC44 AC098864.1-204ENST00000513752 805 ntTSL 4 BASIC21.53■■□□□ 1.04
RETREG2Q8NC44 RNF165-206ENST00000590330 1049 ntTSL 2 BASIC21.53■■□□□ 1.04
RETREG2Q8NC44 GPR146-201ENST00000397095 1969 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
RETREG2Q8NC44 MSANTD2-202ENST00000374979 2349 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
RETREG2Q8NC44 COL9A3-201ENST00000343916 2485 ntAPPRIS P1 TSL 1 (best) BASIC21.53■■□□□ 1.04
RETREG2Q8NC44 HCN1-202ENST00000634658 4738 ntTSL 3 BASIC21.53■■□□□ 1.04
RETREG2Q8NC44 LARGE2-208ENST00000531526 2528 ntAPPRIS P3 TSL 2 BASIC21.53■■□□□ 1.04
RETREG2Q8NC44 PQLC2-202ENST00000375155 1805 ntAPPRIS P1 TSL 2 BASIC21.52■■□□□ 1.04
RETREG2Q8NC44 AMDHD2-201ENST00000293971 1459 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
RETREG2Q8NC44 BCS1L-201ENST00000359273 1454 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
RETREG2Q8NC44 FOXD4-201ENST00000382500 1974 ntAPPRIS P1 BASIC21.52■■□□□ 1.04
RETREG2Q8NC44 GJB3-202ENST00000373366 2217 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
RETREG2Q8NC44 ZNF582-207ENST00000619584 2297 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
RETREG2Q8NC44 TYMSOS-201ENST00000323813 844 ntTSL 1 (best) BASIC21.52■■□□□ 1.04
RETREG2Q8NC44 LCE3D-201ENST00000368787 613 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
RETREG2Q8NC44 AC008040.2-201ENST00000461049 708 ntBASIC21.52■■□□□ 1.04
RETREG2Q8NC44 AC091390.4-202ENST00000476426 537 ntBASIC21.52■■□□□ 1.04
RETREG2Q8NC44 PHB2-207ENST00000542912 1138 ntTSL 5 BASIC21.52■■□□□ 1.04
RETREG2Q8NC44 AC005625.1-201ENST00000590304 472 ntTSL 3 BASIC21.52■■□□□ 1.04
RETREG2Q8NC44 USF2-205ENST00000594064 1179 ntTSL 2 BASIC21.52■■□□□ 1.04
RETREG2Q8NC44 AC008763.3-201ENST00000597959 777 ntAPPRIS P1 TSL 4 BASIC21.52■■□□□ 1.04
RETREG2Q8NC44 TRIP6-201ENST00000200457 1942 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.04
RETREG2Q8NC44 TMEM230-206ENST00000379283 1660 ntAPPRIS P1 TSL 3 BASIC21.52■■□□□ 1.04
RETREG2Q8NC44 CFP-201ENST00000247153 1713 ntAPPRIS P2 TSL 5 BASIC21.52■■□□□ 1.03
RETREG2Q8NC44 ST3GAL4-203ENST00000392669 1724 ntAPPRIS ALT1 TSL 1 (best) BASIC21.52■■□□□ 1.03
RETREG2Q8NC44 RELB-207ENST00000625761 2279 ntAPPRIS ALT2 TSL 5 BASIC21.52■■□□□ 1.03
RETREG2Q8NC44 CHAC1-205ENST00000617961 1498 ntAPPRIS P1 TSL 1 (best) BASIC21.52■■□□□ 1.03
RETREG2Q8NC44 FBLN7-202ENST00000331203 2301 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
RETREG2Q8NC44 RHOT2-201ENST00000315082 2539 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
RETREG2Q8NC44 TBC1D10A-204ENST00000403477 1950 ntAPPRIS ALT2 TSL 2 BASIC21.51■■□□□ 1.03
RETREG2Q8NC44 HLA-DRB1-201ENST00000360004 1229 ntAPPRIS P1 BASIC21.51■■□□□ 1.03
RETREG2Q8NC44 MATN4-202ENST00000360607 2127 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
RETREG2Q8NC44 TSPY8-202ENST00000383000 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC21.51■■□□□ 1.03
RETREG2Q8NC44 TSPY2-202ENST00000383042 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC21.51■■□□□ 1.03
RETREG2Q8NC44 FAM8A6P-201ENST00000407496 1135 ntBASIC21.51■■□□□ 1.03
RETREG2Q8NC44 TSPY3-201ENST00000424594 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC21.51■■□□□ 1.03
RETREG2Q8NC44 SAPCD2P2-201ENST00000431719 1174 ntBASIC21.51■■□□□ 1.03
RETREG2Q8NC44 TSPY10-202ENST00000444056 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC21.51■■□□□ 1.03
RETREG2Q8NC44 AC092647.4-201ENST00000457211 535 ntBASIC21.51■■□□□ 1.03
RETREG2Q8NC44 BVES-AS1-203ENST00000580511 853 ntTSL 5 BASIC21.51■■□□□ 1.03
RETREG2Q8NC44 AL138966.2-201ENST00000621997 464 ntBASIC21.51■■□□□ 1.03
RETREG2Q8NC44 MYC-201ENST00000259523 2042 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
RETREG2Q8NC44 KLRG2-201ENST00000340940 2197 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
RETREG2Q8NC44 REEP2-202ENST00000378339 2170 ntAPPRIS ALT1 TSL 1 (best) BASIC21.51■■□□□ 1.03
RETREG2Q8NC44 ITGBL1-202ENST00000376180 2494 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
RETREG2Q8NC44 EIF5A-204ENST00000416016 1336 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
RETREG2Q8NC44 RNF170-205ENST00000526349 1338 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
RETREG2Q8NC44 PTGES2-214ENST00000617202 1344 ntTSL 5 BASIC21.51■■□□□ 1.03
RETREG2Q8NC44 BPIFB3-201ENST00000375494 1454 ntAPPRIS P1 TSL 1 (best) BASIC21.51■■□□□ 1.03
RETREG2Q8NC44 QKI-201ENST00000275262 6964 ntTSL 1 (best) BASIC21.51■■□□□ 1.03
RETREG2Q8NC44 CD82-201ENST00000227155 2289 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
RETREG2Q8NC44 AC009133.6-201ENST00000609618 2252 ntAPPRIS P1 TSL 5 BASIC21.5■■□□□ 1.03
RETREG2Q8NC44 LIMS2-204ENST00000409286 1678 ntTSL 2 BASIC21.5■■□□□ 1.03
RETREG2Q8NC44 FGF2-201ENST00000264498 6775 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
RETREG2Q8NC44 PLCL1-201ENST00000428675 5125 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
RETREG2Q8NC44 CYGB-201ENST00000293230 2158 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
RETREG2Q8NC44 ZNF394-203ENST00000426306 2017 ntTSL 1 (best) BASIC21.5■■□□□ 1.03
RETREG2Q8NC44 LAMC3-202ENST00000361069 6133 ntAPPRIS P1 TSL 2 BASIC21.5■■□□□ 1.03
RETREG2Q8NC44 MFSD10-205ENST00000507555 1573 ntTSL 5 BASIC21.5■■□□□ 1.03
RETREG2Q8NC44 ZNF346-209ENST00000512315 1575 ntTSL 2 BASIC21.5■■□□□ 1.03
RETREG2Q8NC44 TMIGD2-201ENST00000301272 1262 ntAPPRIS P3 TSL 1 (best) BASIC21.5■■□□□ 1.03
RETREG2Q8NC44 BAD-201ENST00000309032 929 ntAPPRIS P1 TSL 1 (best) BASIC21.5■■□□□ 1.03
RETREG2Q8NC44 CD7-201ENST00000312648 1281 ntAPPRIS P2 TSL 1 (best) BASIC21.5■■□□□ 1.03
RETREG2Q8NC44 TRPT1-202ENST00000394546 1058 ntAPPRIS ALT1 TSL 5 BASIC21.5■■□□□ 1.03
RETREG2Q8NC44 KRTAP5-3-201ENST00000399685 899 ntAPPRIS P1 BASIC21.5■■□□□ 1.03
RETREG2Q8NC44 TSPY5P-201ENST00000426936 936 ntBASIC21.5■■□□□ 1.03
Retrieved 100 of 98,524 protein–RNA pairs in 32.2 ms