Protein–RNA interactions for Protein: Q8IVW4

CDKL3, Cyclin-dependent kinase-like 3, humanhuman

Predicted RBP Predictions only

Length 592 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDKL3Q8IVW4 ATP6V0E1-204ENST00000519911 718 ntTSL 2 BASIC19.57■□□□□ 0.72
CDKL3Q8IVW4 RPL23AP53-202ENST00000606507 370 ntTSL 3 BASIC19.57■□□□□ 0.72
CDKL3Q8IVW4 AL445675.2-201ENST00000620291 557 ntBASIC19.57■□□□□ 0.72
CDKL3Q8IVW4 CABP2-204ENST00000636477 941 ntTSL 5 BASIC19.57■□□□□ 0.72
CDKL3Q8IVW4 AC083906.6-201ENST00000641366 219 ntBASIC19.57■□□□□ 0.72
CDKL3Q8IVW4 CDC42EP2-201ENST00000279249 2023 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
CDKL3Q8IVW4 FIP1L1-202ENST00000337488 2198 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
CDKL3Q8IVW4 FIP1L1-203ENST00000358575 2180 ntAPPRIS P4 TSL 2 BASIC19.57■□□□□ 0.72
CDKL3Q8IVW4 AL031598.1-201ENST00000561511 1773 ntBASIC19.57■□□□□ 0.72
CDKL3Q8IVW4 FBXL20-202ENST00000394294 2309 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
CDKL3Q8IVW4 CYP46A1-202ENST00000380228 1597 ntTSL 2 BASIC19.57■□□□□ 0.72
CDKL3Q8IVW4 LAMP1-201ENST00000332556 2699 ntAPPRIS P1 TSL 1 (best) BASIC19.57■□□□□ 0.72
CDKL3Q8IVW4 EDA-208ENST00000524573 1381 ntAPPRIS ALT1 TSL 1 (best) BASIC19.57■□□□□ 0.72
CDKL3Q8IVW4 TH-202ENST00000333684 1535 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
CDKL3Q8IVW4 GCDH-216ENST00000591470 1867 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
CDKL3Q8IVW4 NXNL2-202ENST00000375855 1457 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
CDKL3Q8IVW4 PDZRN3-202ENST00000308537 1136 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
CDKL3Q8IVW4 C7orf50-201ENST00000357429 1294 ntAPPRIS P2 TSL 1 (best) BASIC19.56■□□□□ 0.72
CDKL3Q8IVW4 PSMG1-202ENST00000380900 907 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
CDKL3Q8IVW4 CCT7-202ENST00000398422 1234 ntTSL 2 BASIC19.56■□□□□ 0.72
CDKL3Q8IVW4 AL359747.1-201ENST00000442370 536 ntTSL 2 BASIC19.56■□□□□ 0.72
CDKL3Q8IVW4 AC128676.1-201ENST00000454392 318 ntBASIC19.56■□□□□ 0.72
CDKL3Q8IVW4 NDUFS6-202ENST00000469176 550 ntTSL 2 BASIC19.56■□□□□ 0.72
CDKL3Q8IVW4 Z85996.1-201ENST00000494644 937 ntBASIC19.56■□□□□ 0.72
CDKL3Q8IVW4 TESC-AS1-201ENST00000547006 1053 ntTSL 2 BASIC19.56■□□□□ 0.72
CDKL3Q8IVW4 DEF8-211ENST00000563795 1767 ntTSL 5 BASIC19.56■□□□□ 0.72
CDKL3Q8IVW4 Z98044.1-201ENST00000632503 1764 ntBASIC19.56■□□□□ 0.72
CDKL3Q8IVW4 BTNL9-210ENST00000515271 1444 ntTSL 2 BASIC19.56■□□□□ 0.72
CDKL3Q8IVW4 FMR1-207ENST00000439526 3699 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
CDKL3Q8IVW4 DMD-208ENST00000378680 1858 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
CDKL3Q8IVW4 CD72-201ENST00000259633 1548 ntAPPRIS P2 TSL 1 (best) BASIC19.56■□□□□ 0.72
CDKL3Q8IVW4 RABEPK-202ENST00000373538 1504 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
CDKL3Q8IVW4 COX20-203ENST00000411948 2631 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
CDKL3Q8IVW4 GATM-201ENST00000396659 2597 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
CDKL3Q8IVW4 KRT16-201ENST00000301653 1644 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
CDKL3Q8IVW4 TMEM235-203ENST00000550981 1786 ntTSL 2 BASIC19.55■□□□□ 0.72
CDKL3Q8IVW4 SLC35B2-205ENST00000538577 1909 ntTSL 2 BASIC19.55■□□□□ 0.72
CDKL3Q8IVW4 PMEPA1-202ENST00000341744 4845 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
CDKL3Q8IVW4 ZCCHC24-202ENST00000372336 4933 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
CDKL3Q8IVW4 FAM98C-201ENST00000252530 1271 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
CDKL3Q8IVW4 TPCN2-201ENST00000294309 2931 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
CDKL3Q8IVW4 SPATA2L-202ENST00000335360 1001 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
CDKL3Q8IVW4 GRK6-201ENST00000355472 2939 ntAPPRIS P3 TSL 1 (best) BASIC19.55■□□□□ 0.72
CDKL3Q8IVW4 PSRC1-202ENST00000369904 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
CDKL3Q8IVW4 NUDT8-202ENST00000376693 728 ntAPPRIS ALT2 TSL 2 BASIC19.55■□□□□ 0.72
CDKL3Q8IVW4 UHRF2-202ENST00000381373 802 ntTSL 3 BASIC19.55■□□□□ 0.72
CDKL3Q8IVW4 DOLPP1-203ENST00000406974 2037 ntTSL 2 BASIC19.55■□□□□ 0.72
CDKL3Q8IVW4 UBE2F-203ENST00000409633 837 ntTSL 3 BASIC19.55■□□□□ 0.72
CDKL3Q8IVW4 NIFKP9-201ENST00000419265 221 ntBASIC19.55■□□□□ 0.72
CDKL3Q8IVW4 LRCH3-207ENST00000441090 2034 ntTSL 2 BASIC19.55■□□□□ 0.72
CDKL3Q8IVW4 LRRC75A-AS1-205ENST00000475953 1201 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
CDKL3Q8IVW4 SPINK2-202ENST00000504762 659 ntAPPRIS ALT2 TSL 2 BASIC19.55■□□□□ 0.72
CDKL3Q8IVW4 GLRB-205ENST00000512619 728 ntTSL 3 BASIC19.55■□□□□ 0.72
CDKL3Q8IVW4 AP003501.2-201ENST00000524433 477 ntTSL 4 BASIC19.55■□□□□ 0.72
CDKL3Q8IVW4 CLN6-206ENST00000565471 1075 ntTSL 2 BASIC19.55■□□□□ 0.72
CDKL3Q8IVW4 CYTH1-209ENST00000589296 2159 ntTSL 5 BASIC19.55■□□□□ 0.72
CDKL3Q8IVW4 NR2F1-205ENST00000615873 1427 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
CDKL3Q8IVW4 BAG5-201ENST00000299204 4848 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
CDKL3Q8IVW4 SULF2-201ENST00000359930 4915 ntAPPRIS P4 TSL 1 (best) BASIC19.55■□□□□ 0.72
CDKL3Q8IVW4 CCDC34-201ENST00000317945 2109 ntAPPRIS P3 TSL 1 (best) BASIC19.55■□□□□ 0.72
CDKL3Q8IVW4 CADPS2-201ENST00000313070 6065 ntTSL 5 BASIC19.55■□□□□ 0.72
CDKL3Q8IVW4 CEP78-201ENST00000277082 2542 ntAPPRIS ALT2 TSL 2 BASIC19.55■□□□□ 0.72
CDKL3Q8IVW4 FAM228A-201ENST00000295150 1774 ntAPPRIS P2 TSL 1 (best) BASIC19.55■□□□□ 0.72
CDKL3Q8IVW4 TMEM74-201ENST00000297459 1741 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
CDKL3Q8IVW4 SLC29A2-201ENST00000311161 2262 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
CDKL3Q8IVW4 TP53BP2-201ENST00000343537 4651 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
CDKL3Q8IVW4 POU5F1P3-201ENST00000428824 1078 ntBASIC19.54■□□□□ 0.72
CDKL3Q8IVW4 PTPA-216ENST00000432651 857 ntTSL 2 BASIC19.54■□□□□ 0.72
CDKL3Q8IVW4 A3GALT2-201ENST00000442999 1023 ntAPPRIS P1 TSL 5 BASIC19.54■□□□□ 0.72
CDKL3Q8IVW4 AP002982.1-201ENST00000492365 877 ntBASIC19.54■□□□□ 0.72
CDKL3Q8IVW4 CDIPT-204ENST00000563415 1047 ntTSL 3 BASIC19.54■□□□□ 0.72
CDKL3Q8IVW4 MIR4651-201ENST00000582622 73 ntBASIC19.54■□□□□ 0.72
CDKL3Q8IVW4 ZNF667-AS1-206ENST00000591797 535 ntTSL 5 BASIC19.54■□□□□ 0.72
CDKL3Q8IVW4 KRTAP5-11-203ENST00000617152 558 ntAPPRIS ALT2 TSL 5 BASIC19.54■□□□□ 0.72
CDKL3Q8IVW4 AC131212.4-201ENST00000623606 975 ntBASIC19.54■□□□□ 0.72
CDKL3Q8IVW4 KRT13-202ENST00000336861 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC19.54■□□□□ 0.72
CDKL3Q8IVW4 PFN2-203ENST00000452853 1780 ntAPPRIS ALT1 TSL 1 (best) BASIC19.54■□□□□ 0.72
CDKL3Q8IVW4 PAX1-201ENST00000398485 2838 ntAPPRIS P3 TSL 5 BASIC19.54■□□□□ 0.72
CDKL3Q8IVW4 CLIP2-201ENST00000223398 5563 ntAPPRIS P1 TSL 5 BASIC19.54■□□□□ 0.72
CDKL3Q8IVW4 CSF1-203ENST00000369801 1364 ntTSL 1 (best) BASIC19.54■□□□□ 0.72
CDKL3Q8IVW4 COPS7A-204ENST00000534947 2034 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
CDKL3Q8IVW4 KRT6C-201ENST00000252250 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
CDKL3Q8IVW4 KRT6B-201ENST00000252252 2282 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
CDKL3Q8IVW4 FAM72C-202ENST00000584486 2297 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
CDKL3Q8IVW4 HTRA3-201ENST00000307358 2541 ntAPPRIS P1 TSL 1 (best) BASIC19.54■□□□□ 0.72
CDKL3Q8IVW4 CHRNA4-207ENST00000615287 5643 ntTSL 5 BASIC19.54■□□□□ 0.72
CDKL3Q8IVW4 MEN1-201ENST00000312049 2761 ntAPPRIS ALT1 TSL 1 (best) BASIC19.54■□□□□ 0.72
CDKL3Q8IVW4 C6orf223-202ENST00000439969 2757 ntTSL 2 BASIC19.54■□□□□ 0.72
CDKL3Q8IVW4 CADPS-201ENST00000283269 4591 ntAPPRIS P4 TSL 1 (best) BASIC19.54■□□□□ 0.72
CDKL3Q8IVW4 LRRC27-203ENST00000368613 2113 ntAPPRIS P3 TSL 1 (best) BASIC19.54■□□□□ 0.72
CDKL3Q8IVW4 NDRG2-227ENST00000554143 1980 ntAPPRIS ALT1 TSL 2 BASIC19.53■□□□□ 0.72
CDKL3Q8IVW4 EGFR-202ENST00000342916 2239 ntTSL 1 (best) BASIC19.53■□□□□ 0.72
CDKL3Q8IVW4 BAIAP2-204ENST00000428708 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
CDKL3Q8IVW4 FAM91A1-201ENST00000334705 5511 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.72
CDKL3Q8IVW4 AC007405.3-201ENST00000429172 561 ntTSL 3 BASIC19.53■□□□□ 0.72
CDKL3Q8IVW4 ASH1L-AS1-202ENST00000456633 911 ntTSL 2 BASIC19.53■□□□□ 0.72
CDKL3Q8IVW4 C1QBPP2-201ENST00000528754 825 ntBASIC19.53■□□□□ 0.72
CDKL3Q8IVW4 NDUFV2-AS1-201ENST00000582375 770 ntTSL 2 BASIC19.53■□□□□ 0.72
CDKL3Q8IVW4 TCP11-204ENST00000373979 1882 ntAPPRIS P3 TSL 5 BASIC19.53■□□□□ 0.72
CDKL3Q8IVW4 IL4I1-202ENST00000391826 1863 ntAPPRIS ALT2 TSL 1 (best) BASIC19.53■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 17.9 ms