Protein–RNA interactions for Protein: Q86VP3

PACS2, Phosphofurin acidic cluster sorting protein 2, humanhuman

Predictions only

Length 889 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PACS2Q86VP3 HGFAC-201ENST00000382774 2159 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
PACS2Q86VP3 MYH14-208ENST00000598205 6137 ntAPPRIS P3 TSL 5 BASIC19.12■□□□□ 0.65
PACS2Q86VP3 ZBTB32-201ENST00000262630 1960 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
PACS2Q86VP3 TEFM-205ENST00000581216 1891 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
PACS2Q86VP3 OTUB1-209ENST00000538426 1729 ntAPPRIS P2 TSL 1 (best) BASIC19.12■□□□□ 0.65
PACS2Q86VP3 TUSC2-201ENST00000232496 1691 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
PACS2Q86VP3 SPR-201ENST00000234454 1480 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
PACS2Q86VP3 TBXA2R-202ENST00000411851 1494 ntTSL 2 BASIC19.12■□□□□ 0.65
PACS2Q86VP3 STAC-204ENST00000457375 1366 ntTSL 2 BASIC19.12■□□□□ 0.65
PACS2Q86VP3 ATPIF1-203ENST00000468425 539 ntTSL 2 BASIC19.12■□□□□ 0.65
PACS2Q86VP3 TMEM218-207ENST00000528724 1117 ntTSL 5 BASIC19.12■□□□□ 0.65
PACS2Q86VP3 TMEM218-214ENST00000532156 954 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
PACS2Q86VP3 SLC25A29-212ENST00000555927 960 ntTSL 2 BASIC19.12■□□□□ 0.65
PACS2Q86VP3 Z97986.1-201ENST00000565879 476 ntTSL 5 BASIC19.12■□□□□ 0.65
PACS2Q86VP3 PARD6A-203ENST00000602551 1171 ntTSL 5 BASIC19.12■□□□□ 0.65
PACS2Q86VP3 AC013268.1-206ENST00000638368 961 ntBASIC19.12■□□□□ 0.65
PACS2Q86VP3 AC112229.1-201ENST00000639295 961 ntBASIC19.12■□□□□ 0.65
PACS2Q86VP3 LYSMD4-201ENST00000332728 2847 ntTSL 4 BASIC19.12■□□□□ 0.65
PACS2Q86VP3 HSPA1A-201ENST00000375651 2483 ntAPPRIS P1 BASIC19.12■□□□□ 0.65
PACS2Q86VP3 KLC1-217ENST00000554280 2426 ntTSL 5 BASIC19.12■□□□□ 0.65
PACS2Q86VP3 EARS2-210ENST00000564501 2027 ntTSL 5 BASIC19.12■□□□□ 0.65
PACS2Q86VP3 TUBA3FP-202ENST00000422086 1974 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
PACS2Q86VP3 CBR1-205ENST00000530908 1924 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
PACS2Q86VP3 FENDRR-203ENST00000595886 3095 ntTSL 2 BASIC19.11■□□□□ 0.65
PACS2Q86VP3 C17orf62-202ENST00000342572 1849 ntTSL 2 BASIC19.11■□□□□ 0.65
PACS2Q86VP3 SBNO2-201ENST00000361757 4923 ntAPPRIS P4 TSL 1 (best) BASIC19.11■□□□□ 0.65
PACS2Q86VP3 PLAGL1-207ENST00000417959 1645 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
PACS2Q86VP3 ENTPD6-209ENST00000433259 2654 ntTSL 5 BASIC19.11■□□□□ 0.65
PACS2Q86VP3 BX119927.1-201ENST00000636596 1552 ntBASIC19.11■□□□□ 0.65
PACS2Q86VP3 ADA-201ENST00000372874 1539 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
PACS2Q86VP3 RELL2-201ENST00000297164 2520 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
PACS2Q86VP3 NOL4-211ENST00000589544 2221 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
PACS2Q86VP3 LGI2-201ENST00000382114 6428 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
PACS2Q86VP3 H2AFV-201ENST00000222690 3804 ntAPPRIS ALT1 TSL 2 BASIC19.11■□□□□ 0.65
PACS2Q86VP3 CFD-201ENST00000327726 1201 ntAPPRIS P3 TSL 1 (best) BASIC19.11■□□□□ 0.65
PACS2Q86VP3 AC006970.2-201ENST00000450065 779 ntBASIC19.11■□□□□ 0.65
PACS2Q86VP3 AC120057.1-201ENST00000483947 663 ntBASIC19.11■□□□□ 0.65
PACS2Q86VP3 RAP2CP1-201ENST00000605103 478 ntBASIC19.11■□□□□ 0.65
PACS2Q86VP3 CD99-212ENST00000624481 1089 ntAPPRIS ALT2 TSL 2 BASIC19.11■□□□□ 0.65
PACS2Q86VP3 NOL4L-205ENST00000375678 2042 ntAPPRIS ALT2 TSL 2 BASIC19.11■□□□□ 0.65
PACS2Q86VP3 LOXL3-205ENST00000409986 2005 ntTSL 2 BASIC19.11■□□□□ 0.65
PACS2Q86VP3 GOLGA2P9-203ENST00000600260 2033 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
PACS2Q86VP3 CACNA1A-246ENST00000637736 8340 ntAPPRIS ALT2 TSL 5 BASIC19.11■□□□□ 0.65
PACS2Q86VP3 PRRT4-201ENST00000446477 3544 ntAPPRIS P1 TSL 5 BASIC19.11■□□□□ 0.65
PACS2Q86VP3 RND2-202ENST00000587250 4147 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
PACS2Q86VP3 C8orf58-207ENST00000615223 1848 ntAPPRIS ALT2 TSL 5 BASIC19.11■□□□□ 0.65
PACS2Q86VP3 POLR3E-203ENST00000418581 2529 ntTSL 2 BASIC19.11■□□□□ 0.65
PACS2Q86VP3 FMR1-207ENST00000439526 3699 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
PACS2Q86VP3 AC012317.2-201ENST00000623305 2251 ntBASIC19.11■□□□□ 0.65
PACS2Q86VP3 AD000864.1-201ENST00000624076 2295 ntBASIC19.11■□□□□ 0.65
PACS2Q86VP3 RPS6KA5-201ENST00000418736 2249 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
PACS2Q86VP3 PIGP-207ENST00000464265 3437 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
PACS2Q86VP3 GGT6-202ENST00000381550 2145 ntTSL 2 BASIC19.1■□□□□ 0.65
PACS2Q86VP3 GLUD1-201ENST00000277865 3039 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
PACS2Q86VP3 PABPC1L-217ENST00000537323 1910 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
PACS2Q86VP3 MUTYH-203ENST00000372098 1839 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
PACS2Q86VP3 MUTYH-204ENST00000372104 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
PACS2Q86VP3 MUTYH-205ENST00000372110 1809 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
PACS2Q86VP3 SSR1-204ENST00000474597 1808 ntTSL 5 BASIC19.1■□□□□ 0.65
PACS2Q86VP3 TINAGL1-211ENST00000537531 1841 ntAPPRIS ALT2 TSL 5 BASIC19.1■□□□□ 0.65
PACS2Q86VP3 MOB2-201ENST00000329957 1207 ntAPPRIS P1 TSL 2 BASIC19.1■□□□□ 0.65
PACS2Q86VP3 ZNF451-202ENST00000370702 458 ntTSL 2 BASIC19.1■□□□□ 0.65
PACS2Q86VP3 C19orf73-201ENST00000408991 744 ntAPPRIS P1 BASIC19.1■□□□□ 0.65
PACS2Q86VP3 LINC02199-202ENST00000510067 1008 ntTSL 2 BASIC19.1■□□□□ 0.65
PACS2Q86VP3 NDUFS3-207ENST00000529276 558 ntTSL 2 BASIC19.1■□□□□ 0.65
PACS2Q86VP3 SEC23A-213ENST00000557280 561 ntTSL 4 BASIC19.1■□□□□ 0.65
PACS2Q86VP3 GPX1-204ENST00000620890 897 ntAPPRIS ALT2 TSL 5 BASIC19.1■□□□□ 0.65
PACS2Q86VP3 PARP1-210ENST00000629232 477 ntTSL 5 BASIC19.1■□□□□ 0.65
PACS2Q86VP3 Z98044.1-201ENST00000632503 1764 ntBASIC19.1■□□□□ 0.65
PACS2Q86VP3 ERLIN1-203ENST00000421367 5792 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
PACS2Q86VP3 TMEM45B-201ENST00000281441 2234 ntAPPRIS P1 TSL 2 BASIC19.1■□□□□ 0.65
PACS2Q86VP3 RWDD4-201ENST00000326397 2641 ntAPPRIS P2 TSL 2 BASIC19.1■□□□□ 0.65
PACS2Q86VP3 POLR2C-201ENST00000219252 2057 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
PACS2Q86VP3 NFKBIZ-201ENST00000326151 2058 ntTSL 2 BASIC19.1■□□□□ 0.65
PACS2Q86VP3 AL645608.8-201ENST00000606034 2086 ntBASIC19.1■□□□□ 0.65
PACS2Q86VP3 DUX4-204ENST00000569241 1574 ntAPPRIS P2 TSL 1 (best) BASIC19.1■□□□□ 0.65
PACS2Q86VP3 SNAPC3-207ENST00000610884 2453 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
PACS2Q86VP3 PSPC1-206ENST00000619300 2013 ntAPPRIS P1 TSL 5 BASIC19.1■□□□□ 0.65
PACS2Q86VP3 SEPT11-201ENST00000264893 5593 ntAPPRIS P2 TSL 1 (best) BASIC19.1■□□□□ 0.65
PACS2Q86VP3 EIF2AK3-201ENST00000303236 4646 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
PACS2Q86VP3 NFATC4-222ENST00000555590 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
PACS2Q86VP3 FXYD3-203ENST00000435734 1467 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
PACS2Q86VP3 IQSEC2-218ENST00000640694 5958 ntAPPRIS ALT2 TSL 5 BASIC19.09■□□□□ 0.65
PACS2Q86VP3 PPCS-203ENST00000372561 1431 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
PACS2Q86VP3 PKD2-201ENST00000237596 5056 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
PACS2Q86VP3 AVPR1B-201ENST00000367126 2237 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
PACS2Q86VP3 ZNF133-205ENST00000401790 2642 ntAPPRIS ALT2 TSL 2 BASIC19.09■□□□□ 0.65
PACS2Q86VP3 CHRNA4-201ENST00000370263 5577 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
PACS2Q86VP3 SMARCB1-202ENST00000344921 1728 ntTSL 2 BASIC19.09■□□□□ 0.65
PACS2Q86VP3 TOM1L1-204ENST00000570371 2442 ntTSL 5 BASIC19.09■□□□□ 0.65
PACS2Q86VP3 ATG4B-204ENST00000402096 1685 ntTSL 2 BASIC19.09■□□□□ 0.65
PACS2Q86VP3 DCXR-201ENST00000306869 887 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
PACS2Q86VP3 PGPEP1L-201ENST00000378919 995 ntTSL 1 (best) BASIC19.09■□□□□ 0.65
PACS2Q86VP3 FP475955.4-201ENST00000623131 1990 ntBASIC19.09■□□□□ 0.65
PACS2Q86VP3 SLC35A3-222ENST00000640715 1989 ntTSL 5 BASIC19.09■□□□□ 0.65
PACS2Q86VP3 PNMA6E-201ENST00000445091 2192 ntAPPRIS P1 TSL 2 BASIC19.09■□□□□ 0.65
PACS2Q86VP3 MEN1-203ENST00000337652 3162 ntAPPRIS P3 TSL 5 BASIC19.09■□□□□ 0.65
PACS2Q86VP3 EGR2-203ENST00000439032 2844 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
PACS2Q86VP3 HEXDC-203ENST00000577944 1820 ntTSL 5 BASIC19.09■□□□□ 0.65
PACS2Q86VP3 NARFL-201ENST00000251588 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 26.8 ms