Protein–RNA interactions for Protein: Q7Z7F7

MRPL55, 39S ribosomal protein L55, mitochondrial, humanhuman

Known RBP Predictions only

Length 128 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55Q7Z7F7 PRR7-202ENST00000502922 1345 ntAPPRIS P1 TSL 2 BASIC12.26□□□□□ -0.45
MRPL55Q7Z7F7 C12orf42-208ENST00000548883 1336 ntAPPRIS P2 TSL 1 (best) BASIC12.26□□□□□ -0.45
MRPL55Q7Z7F7 STRBP-201ENST00000348403 3337 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
MRPL55Q7Z7F7 SLC23A3-201ENST00000295738 2037 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
MRPL55Q7Z7F7 EARS2-210ENST00000564501 2027 ntTSL 5 BASIC12.26□□□□□ -0.45
MRPL55Q7Z7F7 P3H4-201ENST00000355468 2791 ntAPPRIS P2 TSL 2 BASIC12.26□□□□□ -0.45
MRPL55Q7Z7F7 MBD3-207ENST00000590550 2782 ntTSL 2 BASIC12.26□□□□□ -0.45
MRPL55Q7Z7F7 ZFP69-202ENST00000372706 2871 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
MRPL55Q7Z7F7 UBE2K-203ENST00000445950 2175 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
MRPL55Q7Z7F7 COL18A1-203ENST00000359759 6586 ntAPPRIS ALT2 TSL 5 BASIC12.26□□□□□ -0.45
MRPL55Q7Z7F7 PTDSS1-202ENST00000517309 5177 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
MRPL55Q7Z7F7 TUBA1C-201ENST00000301072 3001 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
MRPL55Q7Z7F7 NTMT1-210ENST00000613644 1501 ntAPPRIS P1 TSL 3 BASIC12.26□□□□□ -0.45
MRPL55Q7Z7F7 CASD1-201ENST00000297273 3942 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
MRPL55Q7Z7F7 LRCH1-201ENST00000311191 4710 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
MRPL55Q7Z7F7 RFC2-202ENST00000352131 1576 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
MRPL55Q7Z7F7 RNF157-201ENST00000269391 4955 ntAPPRIS P3 TSL 1 (best) BASIC12.26□□□□□ -0.45
MRPL55Q7Z7F7 EPHX1-201ENST00000272167 1660 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
MRPL55Q7Z7F7 AC007326.2-201ENST00000624224 7579 ntBASIC12.26□□□□□ -0.45
MRPL55Q7Z7F7 CDH6-205ENST00000514738 2569 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
MRPL55Q7Z7F7 ERLIN2-202ENST00000335171 1742 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
MRPL55Q7Z7F7 HCK-206ENST00000518730 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
MRPL55Q7Z7F7 OGFOD2-201ENST00000228922 1780 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
MRPL55Q7Z7F7 AC148477.3-202ENST00000376617 1766 ntTSL 2 BASIC12.25□□□□□ -0.45
MRPL55Q7Z7F7 ZNF554-201ENST00000317243 2736 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
MRPL55Q7Z7F7 FMR1-207ENST00000439526 3699 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
MRPL55Q7Z7F7 AC013268.5-201ENST00000454928 1959 ntTSL 2 BASIC12.25□□□□□ -0.45
MRPL55Q7Z7F7 CCT5-214ENST00000515676 1997 ntTSL 2 BASIC12.25□□□□□ -0.45
MRPL55Q7Z7F7 MEN1-202ENST00000315422 3148 ntAPPRIS ALT1 TSL 5 BASIC12.25□□□□□ -0.45
MRPL55Q7Z7F7 ERO1A-201ENST00000395686 5285 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
MRPL55Q7Z7F7 MARC2-202ENST00000366913 2134 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
MRPL55Q7Z7F7 IDUA-201ENST00000247933 2163 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
MRPL55Q7Z7F7 LRP8-204ENST00000371454 3322 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
MRPL55Q7Z7F7 RAB7A-201ENST00000265062 2244 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
MRPL55Q7Z7F7 FBXL16-203ENST00000562563 2257 ntTSL 2 BASIC12.25□□□□□ -0.45
MRPL55Q7Z7F7 NDOR1-203ENST00000427047 2315 ntTSL 2 BASIC12.25□□□□□ -0.45
MRPL55Q7Z7F7 GTF3C5-202ENST00000372097 2406 ntAPPRIS P3 TSL 1 (best) BASIC12.25□□□□□ -0.45
MRPL55Q7Z7F7 C2orf82-203ENST00000409533 561 ntAPPRIS P2 TSL 4 BASIC12.25□□□□□ -0.45
MRPL55Q7Z7F7 ZPBP-203ENST00000419417 1095 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
MRPL55Q7Z7F7 ASMTL-AS1-203ENST00000425740 840 ntTSL 2 BASIC12.25□□□□□ -0.45
MRPL55Q7Z7F7 TUBB8P6-201ENST00000436895 1288 ntBASIC12.25□□□□□ -0.45
MRPL55Q7Z7F7 AC069152.1-201ENST00000438030 544 ntBASIC12.25□□□□□ -0.45
MRPL55Q7Z7F7 SLC29A4P2-201ENST00000504749 1089 ntBASIC12.25□□□□□ -0.45
MRPL55Q7Z7F7 SEC23A-AS1-201ENST00000557350 500 ntTSL 3 BASIC12.25□□□□□ -0.45
MRPL55Q7Z7F7 AC091138.1-202ENST00000578967 457 ntTSL 2 BASIC12.25□□□□□ -0.45
MRPL55Q7Z7F7 JOSD2-202ENST00000595669 733 ntTSL 2 BASIC12.25□□□□□ -0.45
MRPL55Q7Z7F7 AC008687.6-201ENST00000596318 630 ntBASIC12.25□□□□□ -0.45
MRPL55Q7Z7F7 NCBP2-AS2-201ENST00000602845 918 ntAPPRIS P1 BASIC12.25□□□□□ -0.45
MRPL55Q7Z7F7 AC083880.1-201ENST00000608266 535 ntBASIC12.25□□□□□ -0.45
MRPL55Q7Z7F7 HOXB9-201ENST00000311177 2581 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
MRPL55Q7Z7F7 RPL7-202ENST00000396465 1308 ntTSL 3 BASIC12.25□□□□□ -0.45
MRPL55Q7Z7F7 MYO1D-201ENST00000318217 5563 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
MRPL55Q7Z7F7 GRIA4-203ENST00000393127 5621 ntTSL 5 BASIC12.25□□□□□ -0.45
MRPL55Q7Z7F7 GRAMD2B-219ENST00000544396 2822 ntTSL 2 BASIC12.25□□□□□ -0.45
MRPL55Q7Z7F7 EFS-201ENST00000216733 3118 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
MRPL55Q7Z7F7 FDFT1-209ENST00000525900 1596 ntTSL 5 BASIC12.25□□□□□ -0.45
MRPL55Q7Z7F7 RBPJL-203ENST00000372743 1623 ntAPPRIS ALT1 TSL 1 (best) BASIC12.25□□□□□ -0.45
MRPL55Q7Z7F7 AC012414.5-201ENST00000564214 1602 ntTSL 5 BASIC12.25□□□□□ -0.45
MRPL55Q7Z7F7 KCNK4-202ENST00000422670 1697 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
MRPL55Q7Z7F7 TEX21P-204ENST00000641479 1693 ntBASIC12.25□□□□□ -0.45
MRPL55Q7Z7F7 OSR2-202ENST00000435298 1736 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
MRPL55Q7Z7F7 ABHD14A-ACY1-202ENST00000463937 1705 ntAPPRIS ALT2 TSL 5 BASIC12.25□□□□□ -0.45
MRPL55Q7Z7F7 MRM3-201ENST00000304478 1809 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
MRPL55Q7Z7F7 MRGPRG-AS1-201ENST00000420873 1818 ntTSL 2 BASIC12.25□□□□□ -0.45
MRPL55Q7Z7F7 ANGPTL4-201ENST00000301455 1879 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
MRPL55Q7Z7F7 NFATC4-231ENST00000557451 5613 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
MRPL55Q7Z7F7 FAM217A-208ENST00000639338 1929 ntTSL 5 BASIC12.25□□□□□ -0.45
MRPL55Q7Z7F7 CMTM7-201ENST00000334983 2038 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
MRPL55Q7Z7F7 MTFR1L-202ENST00000374301 2099 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
MRPL55Q7Z7F7 PDCD10-201ENST00000392750 2067 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
MRPL55Q7Z7F7 MVB12A-201ENST00000317040 2223 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
MRPL55Q7Z7F7 P3H4-202ENST00000393928 2601 ntAPPRIS P2 TSL 1 (best) BASIC12.24□□□□□ -0.45
MRPL55Q7Z7F7 KSR1-205ENST00000509603 2731 ntAPPRIS ALT2 TSL 5 BASIC12.24□□□□□ -0.45
MRPL55Q7Z7F7 NEURL1B-201ENST00000369800 6424 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
MRPL55Q7Z7F7 TACO1-201ENST00000258975 1469 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
MRPL55Q7Z7F7 PYURF-201ENST00000273968 1361 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
MRPL55Q7Z7F7 PRR14-202ENST00000300835 2198 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
MRPL55Q7Z7F7 CD55-201ENST00000314754 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC12.24□□□□□ -0.45
MRPL55Q7Z7F7 AHRR-201ENST00000316418 5661 ntAPPRIS P3 TSL 1 (best) BASIC12.24□□□□□ -0.45
MRPL55Q7Z7F7 ADAP2-201ENST00000330889 2934 ntAPPRIS P2 TSL 1 (best) BASIC12.24□□□□□ -0.45
MRPL55Q7Z7F7 UPP1-201ENST00000331803 1932 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
MRPL55Q7Z7F7 TREX2-204ENST00000370212 861 ntTSL 5 BASIC12.24□□□□□ -0.45
MRPL55Q7Z7F7 TREX2-205ENST00000370231 1255 ntAPPRIS P1 TSL 5 BASIC12.24□□□□□ -0.45
MRPL55Q7Z7F7 ERCC2-203ENST00000391944 2334 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
MRPL55Q7Z7F7 TREX2-207ENST00000393862 907 ntAPPRIS P1 TSL 2 BASIC12.24□□□□□ -0.45
MRPL55Q7Z7F7 RABEPK-204ENST00000394125 1466 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
MRPL55Q7Z7F7 EIF3B-202ENST00000397011 2966 ntAPPRIS P1 TSL 1 (best) BASIC12.24□□□□□ -0.45
MRPL55Q7Z7F7 TMEM214-203ENST00000404032 2830 ntTSL 2 BASIC12.24□□□□□ -0.45
MRPL55Q7Z7F7 HAGLROS-201ENST00000426615 1121 ntTSL 2 BASIC12.24□□□□□ -0.45
MRPL55Q7Z7F7 GATA2-202ENST00000430265 2525 ntTSL 1 (best) BASIC12.24□□□□□ -0.45
MRPL55Q7Z7F7 LMCD1-AS1-204ENST00000446281 932 ntTSL 5 BASIC12.24□□□□□ -0.45
MRPL55Q7Z7F7 NCBP2-207ENST00000452404 1133 ntTSL 2 BASIC12.24□□□□□ -0.45
MRPL55Q7Z7F7 LIME1-205ENST00000480139 819 ntAPPRIS ALT2 TSL 3 BASIC12.24□□□□□ -0.45
MRPL55Q7Z7F7 AMACR-206ENST00000502637 1598 ntTSL 5 BASIC12.24□□□□□ -0.45
MRPL55Q7Z7F7 AC008691.1-203ENST00000515337 1580 ntTSL 2 BASIC12.24□□□□□ -0.45
MRPL55Q7Z7F7 SAAL1-202ENST00000524803 1582 ntAPPRIS P2 TSL 1 (best) BASIC12.24□□□□□ -0.45
MRPL55Q7Z7F7 CXorf49-202ENST00000535490 1715 ntAPPRIS P1 TSL 5 BASIC12.24□□□□□ -0.45
MRPL55Q7Z7F7 CXorf49B-202ENST00000542739 1715 ntAPPRIS P1 TSL 5 BASIC12.24□□□□□ -0.45
MRPL55Q7Z7F7 ALDH7A1-215ENST00000553117 1935 ntTSL 2 BASIC12.24□□□□□ -0.45
MRPL55Q7Z7F7 RGMA-211ENST00000557420 989 ntTSL 3 BASIC12.24□□□□□ -0.45
Retrieved 100 of 98,524 protein–RNA pairs in 22.2 ms