Protein–RNA interactions for Protein: Q7Z401

DENND4A, C-myc promoter-binding protein, humanhuman

Predictions only

Length 1,863 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DENND4AQ7Z401 CHCHD1-201ENST00000372833 835 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
DENND4AQ7Z401 MCCD1P1-208ENST00000445732 328 ntBASIC19.59■□□□□ 0.73
DENND4AQ7Z401 AP002469.2-201ENST00000531724 424 ntBASIC19.59■□□□□ 0.73
DENND4AQ7Z401 TYROBP-205ENST00000585901 620 ntTSL 3 BASIC19.59■□□□□ 0.73
DENND4AQ7Z401 TMIGD2-202ENST00000595645 1212 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
DENND4AQ7Z401 STRADB-201ENST00000194530 2293 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
DENND4AQ7Z401 BRICD5-201ENST00000328540 1913 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
DENND4AQ7Z401 AC096719.1-201ENST00000510705 1874 ntTSL 5 BASIC19.59■□□□□ 0.73
DENND4AQ7Z401 WNT10B-202ENST00000403957 1817 ntTSL 5 BASIC19.59■□□□□ 0.73
DENND4AQ7Z401 CSNK2A2-201ENST00000262506 1701 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
DENND4AQ7Z401 KRT13-202ENST00000336861 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
DENND4AQ7Z401 USF2-202ENST00000343550 1523 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
DENND4AQ7Z401 TNFRSF1A-213ENST00000540022 1527 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
DENND4AQ7Z401 SCT-201ENST00000176195 366 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
DENND4AQ7Z401 FAM239B-201ENST00000381106 1099 ntTSL 2 BASIC19.58■□□□□ 0.73
DENND4AQ7Z401 MIR662-201ENST00000384847 95 ntBASIC19.58■□□□□ 0.73
DENND4AQ7Z401 AC093734.1-201ENST00000416100 242 ntTSL 3 BASIC19.58■□□□□ 0.73
DENND4AQ7Z401 NUS1P1-201ENST00000446295 882 ntBASIC19.58■□□□□ 0.73
DENND4AQ7Z401 LINC00265-3P-201ENST00000447588 903 ntBASIC19.58■□□□□ 0.73
DENND4AQ7Z401 CMPK1-205ENST00000471289 816 ntTSL 2 BASIC19.58■□□□□ 0.73
DENND4AQ7Z401 KLK12-205ENST00000529888 735 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
DENND4AQ7Z401 LINC01582-202ENST00000561215 452 ntTSL 4 BASIC19.58■□□□□ 0.73
DENND4AQ7Z401 AC009084.1-201ENST00000566869 317 ntTSL 5 BASIC19.58■□□□□ 0.73
DENND4AQ7Z401 NUTF2-205ENST00000568396 1179 ntAPPRIS P1 TSL 3 BASIC19.58■□□□□ 0.73
DENND4AQ7Z401 TBCB-205ENST00000585746 875 ntTSL 3 BASIC19.58■□□□□ 0.73
DENND4AQ7Z401 PHOSPHO1-201ENST00000310544 1816 ntAPPRIS P1 TSL 2 BASIC19.58■□□□□ 0.73
DENND4AQ7Z401 TEAD1-206ENST00000527636 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.73
DENND4AQ7Z401 SPPL2B-212ENST00000618220 2459 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
DENND4AQ7Z401 CYP2D7-201ENST00000358097 1655 ntTSL 1 (best) BASIC19.58■□□□□ 0.73
DENND4AQ7Z401 ABHD5-205ENST00000458276 1690 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.73
DENND4AQ7Z401 C21orf91-203ENST00000400559 1593 ntAPPRIS ALT1 TSL 5 BASIC19.58■□□□□ 0.73
DENND4AQ7Z401 ZNF707-201ENST00000358656 2183 ntAPPRIS P1 TSL 2 BASIC19.58■□□□□ 0.73
DENND4AQ7Z401 FAM129C-203ENST00000449408 2004 ntAPPRIS ALT2 TSL 2 BASIC19.58■□□□□ 0.72
DENND4AQ7Z401 ZNF773-204ENST00000598770 2019 ntAPPRIS ALT2 TSL 2 BASIC19.58■□□□□ 0.72
DENND4AQ7Z401 C6orf89-203ENST00000373685 1400 ntAPPRIS ALT2 TSL 5 BASIC19.58■□□□□ 0.72
DENND4AQ7Z401 LTK-202ENST00000355166 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC19.58■□□□□ 0.72
DENND4AQ7Z401 NUDT11-201ENST00000375992 2385 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
DENND4AQ7Z401 TCEAL2-202ENST00000372780 1100 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
DENND4AQ7Z401 AL023284.2-201ENST00000405850 579 ntBASIC19.58■□□□□ 0.72
DENND4AQ7Z401 LINC02247-201ENST00000417135 743 ntTSL 3 BASIC19.58■□□□□ 0.72
DENND4AQ7Z401 FNDC5-205ENST00000496770 837 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
DENND4AQ7Z401 LIMD2-211ENST00000583211 1298 ntTSL 3 BASIC19.58■□□□□ 0.72
DENND4AQ7Z401 AC020909.1-201ENST00000599632 1265 ntAPPRIS P1 TSL 5 BASIC19.58■□□□□ 0.72
DENND4AQ7Z401 SPINK2-205ENST00000616980 677 ntTSL 5 BASIC19.58■□□□□ 0.72
DENND4AQ7Z401 NDOR1-201ENST00000344894 1794 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
DENND4AQ7Z401 CDK4-202ENST00000312990 1650 ntTSL 1 (best) BASIC19.58■□□□□ 0.72
DENND4AQ7Z401 RUFY1-201ENST00000319449 2646 ntAPPRIS P3 TSL 1 (best) BASIC19.58■□□□□ 0.72
DENND4AQ7Z401 CRYZL1-203ENST00000381540 1482 ntTSL 2 BASIC19.57■□□□□ 0.72
DENND4AQ7Z401 TMEM237-213ENST00000621467 1824 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
DENND4AQ7Z401 WIPF1-203ENST00000392546 2180 ntAPPRIS P2 TSL 5 BASIC19.57■□□□□ 0.72
DENND4AQ7Z401 KCNAB2-205ENST00000378092 1202 ntAPPRIS ALT1 TSL 5 BASIC19.57■□□□□ 0.72
DENND4AQ7Z401 MRPL3P1-201ENST00000400109 1033 ntBASIC19.57■□□□□ 0.72
DENND4AQ7Z401 CRELD2-202ENST00000403427 1242 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
DENND4AQ7Z401 DMKN-215ENST00000451297 1111 ntAPPRIS ALT2 TSL 1 (best) BASIC19.57■□□□□ 0.72
DENND4AQ7Z401 PNMA8A-203ENST00000602246 572 ntAPPRIS ALT2 TSL 4 BASIC19.57■□□□□ 0.72
DENND4AQ7Z401 ERCC2-205ENST00000485403 1538 ntTSL 1 (best) BASIC19.57■□□□□ 0.72
DENND4AQ7Z401 SERBP1-201ENST00000361219 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC19.57■□□□□ 0.72
DENND4AQ7Z401 NYAP1-202ENST00000454988 2777 ntTSL 5 BASIC19.57■□□□□ 0.72
DENND4AQ7Z401 ABHD14B-204ENST00000461108 1397 ntTSL 2 BASIC19.57■□□□□ 0.72
DENND4AQ7Z401 C11orf49-201ENST00000278460 1645 ntAPPRIS P3 TSL 1 (best) BASIC19.56■□□□□ 0.72
DENND4AQ7Z401 ENTPD8-201ENST00000344119 2111 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
DENND4AQ7Z401 ENSA-205ENST00000361532 792 ntTSL 2 BASIC19.56■□□□□ 0.72
DENND4AQ7Z401 MRPL28-203ENST00000429738 310 ntTSL 2 BASIC19.56■□□□□ 0.72
DENND4AQ7Z401 AC004975.2-201ENST00000442017 565 ntTSL 5 BASIC19.56■□□□□ 0.72
DENND4AQ7Z401 AC104819.1-201ENST00000504587 486 ntBASIC19.56■□□□□ 0.72
DENND4AQ7Z401 ARSK-202ENST00000504763 1088 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
DENND4AQ7Z401 C5orf49-202ENST00000509627 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
DENND4AQ7Z401 GSTZ1-218ENST00000557053 580 ntTSL 3 BASIC19.56■□□□□ 0.72
DENND4AQ7Z401 AC138894.3-201ENST00000603787 634 ntBASIC19.56■□□□□ 0.72
DENND4AQ7Z401 IZUMO4-213ENST00000620263 947 ntTSL 3 BASIC19.56■□□□□ 0.72
DENND4AQ7Z401 NUTF2-201ENST00000219169 2321 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
DENND4AQ7Z401 USP39-204ENST00000409766 2033 ntTSL 2 BASIC19.56■□□□□ 0.72
DENND4AQ7Z401 CYP21A1P-201ENST00000342991 1971 ntTSL 3 BASIC19.56■□□□□ 0.72
DENND4AQ7Z401 RAB5C-202ENST00000393860 1912 ntAPPRIS P1 TSL 1 (best) BASIC19.56■□□□□ 0.72
DENND4AQ7Z401 AC092667.1-201ENST00000434301 2586 ntBASIC19.56■□□□□ 0.72
DENND4AQ7Z401 PIGQ-206ENST00000422307 2052 ntTSL 3 BASIC19.56■□□□□ 0.72
DENND4AQ7Z401 PTPMT1-201ENST00000326656 928 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
DENND4AQ7Z401 LBX1-AS1-204ENST00000456391 421 ntTSL 5 BASIC19.56■□□□□ 0.72
DENND4AQ7Z401 ZNF706-206ENST00000519744 785 ntTSL 3 BASIC19.56■□□□□ 0.72
DENND4AQ7Z401 NAA38-203ENST00000575071 553 ntTSL 2 BASIC19.56■□□□□ 0.72
DENND4AQ7Z401 PLAUR-214ENST00000601723 1205 ntTSL 1 (best) BASIC19.56■□□□□ 0.72
DENND4AQ7Z401 LITAF-220ENST00000620789 692 ntTSL 5 BASIC19.56■□□□□ 0.72
DENND4AQ7Z401 ZNF692-202ENST00000366471 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
DENND4AQ7Z401 BRD4-202ENST00000360016 3240 ntAPPRIS ALT2 TSL 1 (best) BASIC19.56■□□□□ 0.72
DENND4AQ7Z401 FDXR-201ENST00000293195 1875 ntAPPRIS ALT1 TSL 1 (best) BASIC19.55■□□□□ 0.72
DENND4AQ7Z401 RPRD1A-201ENST00000357384 1850 ntAPPRIS P1 TSL 5 BASIC19.55■□□□□ 0.72
DENND4AQ7Z401 STXBP2-202ENST00000414284 1859 ntAPPRIS ALT1 TSL 1 (best) BASIC19.55■□□□□ 0.72
DENND4AQ7Z401 RHNO1-204ENST00000489288 1870 ntAPPRIS P3 TSL 1 (best) BASIC19.55■□□□□ 0.72
DENND4AQ7Z401 ARID3C-201ENST00000378909 1411 ntAPPRIS P1 TSL 2 BASIC19.55■□□□□ 0.72
DENND4AQ7Z401 ZNF497-202ENST00000425453 2261 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
DENND4AQ7Z401 PDLIM5-205ENST00000380180 2020 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
DENND4AQ7Z401 PTPRN2-204ENST00000404321 1374 ntTSL 5 BASIC19.55■□□□□ 0.72
DENND4AQ7Z401 DNAJB11-202ENST00000439351 2398 ntAPPRIS P1 TSL 1 (best) BASIC19.55■□□□□ 0.72
DENND4AQ7Z401 FAM87B-201ENST00000326734 1947 ntTSL 2 BASIC19.55■□□□□ 0.72
DENND4AQ7Z401 MAFG-AS1-201ENST00000582106 1895 ntTSL 1 (best) BASIC19.55■□□□□ 0.72
DENND4AQ7Z401 SPHK1-207ENST00000590959 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC19.55■□□□□ 0.72
DENND4AQ7Z401 GAD2-202ENST00000376248 680 ntTSL 5 BASIC19.55■□□□□ 0.72
DENND4AQ7Z401 KRT18P31-201ENST00000506277 1292 ntBASIC19.55■□□□□ 0.72
DENND4AQ7Z401 ZBED5-AS1-202ENST00000529014 771 ntTSL 5 BASIC19.55■□□□□ 0.72
DENND4AQ7Z401 GPR32P1-201ENST00000601788 811 ntBASIC19.55■□□□□ 0.72
Retrieved 100 of 98,524 protein–RNA pairs in 38.6 ms