Protein–RNA interactions for Protein: Q7Z3D4

LYSMD3, LysM and putative peptidoglycan-binding domain-containing protein 3, humanhuman

Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD3Q7Z3D4 HOXB9-201ENST00000311177 2581 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
LYSMD3Q7Z3D4 ZNF385C-201ENST00000436535 1572 ntAPPRIS P1 TSL 5 BASIC19.14■□□□□ 0.65
LYSMD3Q7Z3D4 AC005906.2-207ENST00000639005 1580 ntTSL 5 BASIC19.14■□□□□ 0.65
LYSMD3Q7Z3D4 C21orf58-205ENST00000397683 1674 ntAPPRIS ALT2 TSL 2 BASIC19.14■□□□□ 0.65
LYSMD3Q7Z3D4 ZFC3H1-206ENST00000548100 1771 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
LYSMD3Q7Z3D4 MED15P9-202ENST00000427638 1841 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
LYSMD3Q7Z3D4 ARMC6-220ENST00000546344 1814 ntTSL 2 BASIC19.14■□□□□ 0.65
LYSMD3Q7Z3D4 CDC42EP2-201ENST00000279249 2023 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
LYSMD3Q7Z3D4 VWA8-AS1-201ENST00000611103 2079 ntTSL 2 BASIC19.13■□□□□ 0.65
LYSMD3Q7Z3D4 UBE2K-203ENST00000445950 2175 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
LYSMD3Q7Z3D4 YTHDC2-207ENST00000515883 2629 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
LYSMD3Q7Z3D4 NFIX-202ENST00000360105 5459 ntTSL 5 BASIC19.13■□□□□ 0.65
LYSMD3Q7Z3D4 DBNL-214ENST00000456905 1241 ntTSL 2 BASIC19.13■□□□□ 0.65
LYSMD3Q7Z3D4 AC008771.1-201ENST00000508000 1151 ntTSL 2 BASIC19.13■□□□□ 0.65
LYSMD3Q7Z3D4 DEUP1-206ENST00000530273 410 ntTSL 3 BASIC19.13■□□□□ 0.65
LYSMD3Q7Z3D4 SLC25A1P4-201ENST00000567977 778 ntBASIC19.13■□□□□ 0.65
LYSMD3Q7Z3D4 AP000525.1-201ENST00000608286 694 ntBASIC19.13■□□□□ 0.65
LYSMD3Q7Z3D4 AC027031.2-201ENST00000521369 1318 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
LYSMD3Q7Z3D4 PSMD8-210ENST00000620216 1538 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
LYSMD3Q7Z3D4 MINOS1-NBL1-204ENST00000602662 1623 ntAPPRIS P1 TSL 2 BASIC19.13■□□□□ 0.65
LYSMD3Q7Z3D4 HEXDC-201ENST00000327949 1733 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
LYSMD3Q7Z3D4 IP6K1-204ENST00000468463 1815 ntTSL 5 BASIC19.13■□□□□ 0.65
LYSMD3Q7Z3D4 ATPIF1-202ENST00000465645 1855 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
LYSMD3Q7Z3D4 PLIN2-201ENST00000276914 1972 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
LYSMD3Q7Z3D4 PDZD7-201ENST00000370215 2032 ntTSL 2 BASIC19.13■□□□□ 0.65
LYSMD3Q7Z3D4 FAR2P2-204ENST00000424873 2070 ntTSL 2 BASIC19.13■□□□□ 0.65
LYSMD3Q7Z3D4 PCDHA4-201ENST00000378125 2328 ntTSL 5 BASIC19.13■□□□□ 0.65
LYSMD3Q7Z3D4 PCDHB14-202ENST00000624896 2367 ntTSL 2 BASIC19.13■□□□□ 0.65
LYSMD3Q7Z3D4 REPS1-203ENST00000409812 2511 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
LYSMD3Q7Z3D4 VAV1-210ENST00000602142 2620 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
LYSMD3Q7Z3D4 LAD1-202ENST00000391967 2906 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
LYSMD3Q7Z3D4 FGFR1-238ENST00000532791 5590 ntAPPRIS ALT1 TSL 5 BASIC19.13■□□□□ 0.65
LYSMD3Q7Z3D4 HOOK1-201ENST00000371208 5857 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
LYSMD3Q7Z3D4 XKR6-203ENST00000416569 3382 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
LYSMD3Q7Z3D4 RTN4-201ENST00000317610 2333 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
LYSMD3Q7Z3D4 PIANP-201ENST00000320591 2323 ntAPPRIS P3 TSL 1 (best) BASIC19.12■□□□□ 0.65
LYSMD3Q7Z3D4 C2orf81-201ENST00000290390 2227 ntAPPRIS P5 TSL 5 BASIC19.12■□□□□ 0.65
LYSMD3Q7Z3D4 KAT5-203ENST00000377046 2237 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
LYSMD3Q7Z3D4 SIX5-203ENST00000560168 1975 ntTSL 4 BASIC19.12■□□□□ 0.65
LYSMD3Q7Z3D4 IRX1P1-201ENST00000438849 1838 ntBASIC19.12■□□□□ 0.65
LYSMD3Q7Z3D4 LINC01586-201ENST00000506090 1840 ntTSL 2 BASIC19.12■□□□□ 0.65
LYSMD3Q7Z3D4 MBIP-203ENST00000416007 1648 ntAPPRIS P3 TSL 1 (best) BASIC19.12■□□□□ 0.65
LYSMD3Q7Z3D4 RHBDL1-201ENST00000219551 1560 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
LYSMD3Q7Z3D4 GPRC5C-205ENST00000481232 1592 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
LYSMD3Q7Z3D4 UBE2E3-209ENST00000602710 1556 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
LYSMD3Q7Z3D4 PLAUR-203ENST00000340093 1548 ntAPPRIS P3 TSL 1 (best) BASIC19.12■□□□□ 0.65
LYSMD3Q7Z3D4 GCOM1-201ENST00000380568 1516 ntAPPRIS ALT2 TSL 2 BASIC19.12■□□□□ 0.65
LYSMD3Q7Z3D4 GAS2L1P1-201ENST00000420145 1480 ntBASIC19.12■□□□□ 0.65
LYSMD3Q7Z3D4 UNC93B2-201ENST00000285383 730 ntBASIC19.12■□□□□ 0.65
LYSMD3Q7Z3D4 DUSP23-203ENST00000368109 729 ntAPPRIS P1 TSL 2 BASIC19.12■□□□□ 0.65
LYSMD3Q7Z3D4 C9orf129-201ENST00000375419 1154 ntAPPRIS P1 TSL 5 BASIC19.12■□□□□ 0.65
LYSMD3Q7Z3D4 UBB-203ENST00000395839 1012 ntAPPRIS P1 TSL 2 BASIC19.12■□□□□ 0.65
LYSMD3Q7Z3D4 AL162231.1-203ENST00000416454 465 ntAPPRIS ALT2 TSL 2 BASIC19.12■□□□□ 0.65
LYSMD3Q7Z3D4 GXYLT1P3-201ENST00000453058 1193 ntBASIC19.12■□□□□ 0.65
LYSMD3Q7Z3D4 FDX2-206ENST00000492239 773 ntTSL 2 BASIC19.12■□□□□ 0.65
LYSMD3Q7Z3D4 USP46-AS1-201ENST00000503051 1048 ntTSL 3 BASIC19.12■□□□□ 0.65
LYSMD3Q7Z3D4 AC097488.1-201ENST00000507834 756 ntBASIC19.12■□□□□ 0.65
LYSMD3Q7Z3D4 NEURL1B-202ENST00000520919 1089 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
LYSMD3Q7Z3D4 ZNF561-AS1-202ENST00000586614 568 ntTSL 5 BASIC19.12■□□□□ 0.65
LYSMD3Q7Z3D4 AC008649.1-201ENST00000589557 516 ntTSL 2 BASIC19.12■□□□□ 0.65
LYSMD3Q7Z3D4 CAMKK1-202ENST00000348335 3563 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
LYSMD3Q7Z3D4 LSM12-201ENST00000293406 2308 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
LYSMD3Q7Z3D4 PCBP3-206ENST00000400314 2202 ntAPPRIS P2 TSL 5 BASIC19.12■□□□□ 0.65
LYSMD3Q7Z3D4 AGPAT5-201ENST00000285518 3685 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
LYSMD3Q7Z3D4 REEP2-202ENST00000378339 2170 ntAPPRIS ALT1 TSL 1 (best) BASIC19.12■□□□□ 0.65
LYSMD3Q7Z3D4 FAM239A-202ENST00000438107 2155 ntTSL 5 BASIC19.12■□□□□ 0.65
LYSMD3Q7Z3D4 AR-209ENST00000613054 3532 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
LYSMD3Q7Z3D4 CFAP100-203ENST00000505024 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC19.12■□□□□ 0.65
LYSMD3Q7Z3D4 FBXO41-204ENST00000520530 3293 ntAPPRIS P1 TSL 5 BASIC19.12■□□□□ 0.65
LYSMD3Q7Z3D4 MRGPRG-AS1-201ENST00000420873 1818 ntTSL 2 BASIC19.11■□□□□ 0.65
LYSMD3Q7Z3D4 TPD52-211ENST00000519303 1594 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
LYSMD3Q7Z3D4 HERPUD2-201ENST00000311350 2474 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
LYSMD3Q7Z3D4 TRMT2A-203ENST00000404751 2498 ntAPPRIS ALT2 TSL 2 BASIC19.11■□□□□ 0.65
LYSMD3Q7Z3D4 HSPB6-201ENST00000004982 1457 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
LYSMD3Q7Z3D4 ARHGAP11A-208ENST00000567348 2422 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
LYSMD3Q7Z3D4 RENBP-202ENST00000393700 1388 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
LYSMD3Q7Z3D4 FBXO24-201ENST00000241071 2276 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
LYSMD3Q7Z3D4 ADGRL1-202ENST00000361434 5610 ntAPPRIS P3 TSL 1 (best) BASIC19.11■□□□□ 0.65
LYSMD3Q7Z3D4 IL17C-201ENST00000244241 1044 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
LYSMD3Q7Z3D4 MDK-201ENST00000359803 985 ntAPPRIS P2 TSL 2 BASIC19.11■□□□□ 0.65
LYSMD3Q7Z3D4 PMVK-201ENST00000368467 1280 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
LYSMD3Q7Z3D4 ZFYVE1-202ENST00000394207 1183 ntTSL 2 BASIC19.11■□□□□ 0.65
LYSMD3Q7Z3D4 HOXD12-201ENST00000404162 841 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
LYSMD3Q7Z3D4 AC026412.1-201ENST00000507290 1033 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
LYSMD3Q7Z3D4 PRSS44-201ENST00000515154 1146 ntBASIC19.11■□□□□ 0.65
LYSMD3Q7Z3D4 AC136628.4-201ENST00000520758 535 ntTSL 2 BASIC19.11■□□□□ 0.65
LYSMD3Q7Z3D4 BX088651.1-201ENST00000540551 451 ntBASIC19.11■□□□□ 0.65
LYSMD3Q7Z3D4 TARBP2-220ENST00000552857 916 ntTSL 5 BASIC19.11■□□□□ 0.65
LYSMD3Q7Z3D4 AP005263.1-201ENST00000579126 914 ntTSL 2 BASIC19.11■□□□□ 0.65
LYSMD3Q7Z3D4 ZNF667-AS1-208ENST00000594783 475 ntTSL 3 BASIC19.11■□□□□ 0.65
LYSMD3Q7Z3D4 OAZ1-211ENST00000602676 1148 ntAPPRIS P3 TSL 5 BASIC19.11■□□□□ 0.65
LYSMD3Q7Z3D4 AC073912.3-201ENST00000624414 853 ntBASIC19.11■□□□□ 0.65
LYSMD3Q7Z3D4 SQSTM1-216ENST00000626660 274 ntTSL 5 BASIC19.11■□□□□ 0.65
LYSMD3Q7Z3D4 CROCCP2-205ENST00000639481 1296 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
LYSMD3Q7Z3D4 PROB1-201ENST00000434752 5122 ntAPPRIS P1 BASIC19.11■□□□□ 0.65
LYSMD3Q7Z3D4 NAPRT-203ENST00000435154 1877 ntTSL 2 BASIC19.11■□□□□ 0.65
LYSMD3Q7Z3D4 PDZD3-203ENST00000525131 1882 ntTSL 2 BASIC19.11■□□□□ 0.65
LYSMD3Q7Z3D4 FST-201ENST00000256759 2519 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
LYSMD3Q7Z3D4 CORO1A-216ENST00000570045 1622 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
LYSMD3Q7Z3D4 RFC2-213ENST00000621097 1635 ntTSL 5 BASIC19.11■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 44.4 ms