Protein–RNA interactions for Protein: Q70E73

RAPH1, Ras-associated and pleckstrin homology domains-containing protein 1, humanhuman

Predictions only

Length 1,250 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAPH1Q70E73 PAQR4-202ENST00000318782 2793 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
RAPH1Q70E73 PRR5-ARHGAP8-201ENST00000352766 2043 ntAPPRIS P1 TSL 2 BASIC19.12■□□□□ 0.65
RAPH1Q70E73 PDLIM2-204ENST00000397760 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
RAPH1Q70E73 DOK4-218ENST00000569548 1848 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
RAPH1Q70E73 AGAP2-201ENST00000257897 5388 ntAPPRIS P3 TSL 1 (best) BASIC19.12■□□□□ 0.65
RAPH1Q70E73 STARD3-209ENST00000544210 1666 ntTSL 2 BASIC19.12■□□□□ 0.65
RAPH1Q70E73 PYURF-201ENST00000273968 1361 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
RAPH1Q70E73 AC008443.1-203ENST00000505151 886 ntTSL 2 BASIC19.12■□□□□ 0.65
RAPH1Q70E73 AC016065.1-203ENST00000523225 1017 ntTSL 3 BASIC19.12■□□□□ 0.65
RAPH1Q70E73 TK2-208ENST00000545043 1120 ntTSL 2 BASIC19.12■□□□□ 0.65
RAPH1Q70E73 COX4I1-202ENST00000561569 716 ntAPPRIS P1 TSL 2 BASIC19.12■□□□□ 0.65
RAPH1Q70E73 AC098934.4-201ENST00000564127 592 ntBASIC19.12■□□□□ 0.65
RAPH1Q70E73 AL138781.1-201ENST00000566567 1274 ntBASIC19.12■□□□□ 0.65
RAPH1Q70E73 COX20-203ENST00000411948 2631 ntAPPRIS P1 TSL 1 (best) BASIC19.12■□□□□ 0.65
RAPH1Q70E73 SEMA6D-205ENST00000389425 2318 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
RAPH1Q70E73 TMEM8B-204ENST00000439587 2150 ntTSL 1 (best) BASIC19.12■□□□□ 0.65
RAPH1Q70E73 NOP14-AS1-202ENST00000505731 1999 ntTSL 2 BASIC19.12■□□□□ 0.65
RAPH1Q70E73 USP39-202ENST00000409025 1946 ntTSL 5 BASIC19.12■□□□□ 0.65
RAPH1Q70E73 TSG101-201ENST00000251968 1824 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
RAPH1Q70E73 WDR34-201ENST00000372715 1755 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
RAPH1Q70E73 NRN1-204ENST00000622188 1795 ntTSL 2 BASIC19.11■□□□□ 0.65
RAPH1Q70E73 CARD10-202ENST00000403299 4113 ntAPPRIS P1 TSL 5 BASIC19.11■□□□□ 0.65
RAPH1Q70E73 SLC37A2-203ENST00000403796 2910 ntAPPRIS ALT1 TSL 2 BASIC19.11■□□□□ 0.65
RAPH1Q70E73 RNF167-205ENST00000571816 1728 ntAPPRIS P3 TSL 5 BASIC19.11■□□□□ 0.65
RAPH1Q70E73 VBP1-201ENST00000286428 1686 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
RAPH1Q70E73 SLC35F3-201ENST00000366617 2762 ntAPPRIS ALT1 TSL 1 (best) BASIC19.11■□□□□ 0.65
RAPH1Q70E73 HOXB2-201ENST00000330070 1562 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
RAPH1Q70E73 SENP2-201ENST00000296257 5717 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
RAPH1Q70E73 BAG3-201ENST00000369085 2571 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
RAPH1Q70E73 HSPB2-C11orf52-202ENST00000534100 1521 ntAPPRIS ALT2 TSL 2 BASIC19.11■□□□□ 0.65
RAPH1Q70E73 B4GALT1-202ENST00000535206 1535 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
RAPH1Q70E73 TRAK1-209ENST00000487159 5536 ntAPPRIS ALT2 TSL 5 BASIC19.11■□□□□ 0.65
RAPH1Q70E73 SLC6A17-201ENST00000331565 6427 ntAPPRIS P1 TSL 2 BASIC19.11■□□□□ 0.65
RAPH1Q70E73 CERS6-201ENST00000305747 7217 ntAPPRIS P3 TSL 2 BASIC19.11■□□□□ 0.65
RAPH1Q70E73 GPR142-201ENST00000335666 1437 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
RAPH1Q70E73 IFI27L2-201ENST00000238609 511 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
RAPH1Q70E73 AC068473.1-201ENST00000317008 1111 ntTSL 2 BASIC19.11■□□□□ 0.65
RAPH1Q70E73 VMO1-201ENST00000328739 766 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
RAPH1Q70E73 UBE2I-203ENST00000397514 2976 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
RAPH1Q70E73 LEF1-AS1-203ENST00000507799 459 ntTSL 3 BASIC19.11■□□□□ 0.65
RAPH1Q70E73 KRT18P16-201ENST00000510337 1294 ntBASIC19.11■□□□□ 0.65
RAPH1Q70E73 AP001458.2-201ENST00000528405 577 ntAPPRIS P1 TSL 4 BASIC19.11■□□□□ 0.65
RAPH1Q70E73 EML2-AS1-202ENST00000591087 838 ntTSL 3 BASIC19.11■□□□□ 0.65
RAPH1Q70E73 AC008687.6-201ENST00000596318 630 ntBASIC19.11■□□□□ 0.65
RAPH1Q70E73 NCBP2-AS2-201ENST00000602845 918 ntAPPRIS P1 BASIC19.11■□□□□ 0.65
RAPH1Q70E73 AC083880.1-201ENST00000608266 535 ntBASIC19.11■□□□□ 0.65
RAPH1Q70E73 AL121829.2-201ENST00000620908 328 ntBASIC19.11■□□□□ 0.65
RAPH1Q70E73 DOLPP1-203ENST00000406974 2037 ntTSL 2 BASIC19.11■□□□□ 0.65
RAPH1Q70E73 PGAM1-201ENST00000334828 1830 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
RAPH1Q70E73 IRX1P1-201ENST00000438849 1838 ntBASIC19.11■□□□□ 0.65
RAPH1Q70E73 THOC3-208ENST00000513482 1796 ntTSL 1 (best) BASIC19.11■□□□□ 0.65
RAPH1Q70E73 PPP1R18-201ENST00000274853 4599 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
RAPH1Q70E73 PPP1R18-205ENST00000615527 4597 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
RAPH1Q70E73 EPOR-201ENST00000222139 2411 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
RAPH1Q70E73 AUP1-201ENST00000377526 1695 ntAPPRIS P1 TSL 1 (best) BASIC19.11■□□□□ 0.65
RAPH1Q70E73 NDUFV3-202ENST00000354250 1575 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
RAPH1Q70E73 WAC-202ENST00000347934 2839 ntTSL 5 BASIC19.1■□□□□ 0.65
RAPH1Q70E73 FIP1L1-202ENST00000337488 2198 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
RAPH1Q70E73 RELA-202ENST00000406246 2700 ntAPPRIS P3 TSL 1 (best) BASIC19.1■□□□□ 0.65
RAPH1Q70E73 ADORA2A-213ENST00000610595 2736 ntAPPRIS P1 TSL 2 BASIC19.1■□□□□ 0.65
RAPH1Q70E73 TACO1-201ENST00000258975 1469 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
RAPH1Q70E73 LRCH3-207ENST00000441090 2034 ntTSL 2 BASIC19.1■□□□□ 0.65
RAPH1Q70E73 CCNO-201ENST00000282572 1433 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
RAPH1Q70E73 C6orf89-203ENST00000373685 1400 ntAPPRIS ALT2 TSL 5 BASIC19.1■□□□□ 0.65
RAPH1Q70E73 OGFOD2-207ENST00000536150 1956 ntTSL 2 BASIC19.1■□□□□ 0.65
RAPH1Q70E73 KMT5A-201ENST00000330479 3069 ntAPPRIS ALT2 TSL 1 (best) BASIC19.1■□□□□ 0.65
RAPH1Q70E73 AKT1S1-207ENST00000391835 3075 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
RAPH1Q70E73 LTB4R2-202ENST00000528054 3092 ntBASIC19.1■□□□□ 0.65
RAPH1Q70E73 TMEM214-201ENST00000238788 2990 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
RAPH1Q70E73 COL27A1-201ENST00000356083 7790 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
RAPH1Q70E73 SLC2A11-204ENST00000398356 2388 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
RAPH1Q70E73 TLK2-203ENST00000346027 3449 ntAPPRIS P3 TSL 1 (best) BASIC19.1■□□□□ 0.65
RAPH1Q70E73 KLHDC4-203ENST00000347925 1821 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
RAPH1Q70E73 GLI4-202ENST00000344692 1012 ntTSL 2 BASIC19.1■□□□□ 0.65
RAPH1Q70E73 RAMP1-202ENST00000403885 650 ntTSL 3 BASIC19.1■□□□□ 0.65
RAPH1Q70E73 EIF4E3-203ENST00000421769 777 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
RAPH1Q70E73 LIME1-205ENST00000480139 819 ntAPPRIS ALT2 TSL 3 BASIC19.1■□□□□ 0.65
RAPH1Q70E73 AF274858.3-202ENST00000569906 755 ntTSL 3 BASIC19.1■□□□□ 0.65
RAPH1Q70E73 AC091138.1-202ENST00000578967 457 ntTSL 2 BASIC19.1■□□□□ 0.65
RAPH1Q70E73 AL109923.1-201ENST00000618799 583 ntBASIC19.1■□□□□ 0.65
RAPH1Q70E73 HEXDC-201ENST00000327949 1733 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
RAPH1Q70E73 DMRTA1-201ENST00000325870 5569 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
RAPH1Q70E73 PHF12-205ENST00000577226 7679 ntTSL 1 (best) BASIC19.1■□□□□ 0.65
RAPH1Q70E73 DUSP1-201ENST00000239223 2019 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
RAPH1Q70E73 TIMM13-201ENST00000215570 1973 ntAPPRIS P1 TSL 1 (best) BASIC19.1■□□□□ 0.65
RAPH1Q70E73 CTBP2-214ENST00000531469 1918 ntAPPRIS P1 TSL 2 BASIC19.1■□□□□ 0.65
RAPH1Q70E73 MPV17L2-204ENST00000599612 1408 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
RAPH1Q70E73 SMC5-AS1-201ENST00000594708 1818 ntTSL 2 BASIC19.09■□□□□ 0.65
RAPH1Q70E73 PTPDC1-202ENST00000375360 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
RAPH1Q70E73 PITX3-201ENST00000370002 1391 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
RAPH1Q70E73 KCNQ2-213ENST00000626839 9213 ntAPPRIS ALT1 TSL 1 (best) BASIC19.09■□□□□ 0.65
RAPH1Q70E73 BAIAP2-204ENST00000428708 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC19.09■□□□□ 0.65
RAPH1Q70E73 RAMP2-201ENST00000253796 780 ntAPPRIS P2 TSL 1 (best) BASIC19.09■□□□□ 0.65
RAPH1Q70E73 NCBP2-207ENST00000452404 1133 ntTSL 2 BASIC19.09■□□□□ 0.65
RAPH1Q70E73 PAQR4-205ENST00000576565 842 ntTSL 2 BASIC19.09■□□□□ 0.65
RAPH1Q70E73 AC007786.1-201ENST00000587859 709 ntTSL 2 BASIC19.09■□□□□ 0.65
RAPH1Q70E73 FP475955.4-201ENST00000623131 1990 ntBASIC19.09■□□□□ 0.65
RAPH1Q70E73 FAM90A1-201ENST00000307435 2342 ntAPPRIS P1 TSL 2 BASIC19.09■□□□□ 0.65
RAPH1Q70E73 DDX51-202ENST00000397333 4718 ntAPPRIS P1 TSL 1 (best) BASIC19.09■□□□□ 0.65
RAPH1Q70E73 TSPAN3-210ENST00000561277 1592 ntTSL 5 BASIC19.09■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 39.1 ms