Protein–RNA interactions for Protein: Q6PJP8

DCLRE1A, DNA cross-link repair 1A protein, humanhuman

Predictions only

Length 1,040 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DCLRE1AQ6PJP8 PIEZO1-202ENST00000327397 1246 ntTSL 2 BASIC20.35■□□□□ 0.85
DCLRE1AQ6PJP8 Telomerase-vert.1-201ENST00000363312 438 ntBASIC20.35■□□□□ 0.85
DCLRE1AQ6PJP8 NPM3-201ENST00000370110 877 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
DCLRE1AQ6PJP8 UPK3BP1-201ENST00000428678 509 ntBASIC20.35■□□□□ 0.85
DCLRE1AQ6PJP8 CR769775.1-204ENST00000439760 747 ntTSL 5 BASIC20.35■□□□□ 0.85
DCLRE1AQ6PJP8 AL136307.1-201ENST00000454882 411 ntTSL 2 BASIC20.35■□□□□ 0.85
DCLRE1AQ6PJP8 HOMER2P1-201ENST00000455653 964 ntBASIC20.35■□□□□ 0.85
DCLRE1AQ6PJP8 PHB2-207ENST00000542912 1138 ntTSL 5 BASIC20.35■□□□□ 0.85
DCLRE1AQ6PJP8 AL132780.2-201ENST00000557615 1021 ntTSL 3 BASIC20.35■□□□□ 0.85
DCLRE1AQ6PJP8 AL441883.1-201ENST00000566170 1045 ntBASIC20.35■□□□□ 0.85
DCLRE1AQ6PJP8 NEK4P2-201ENST00000580004 1012 ntBASIC20.35■□□□□ 0.85
DCLRE1AQ6PJP8 UQCR11-201ENST00000585671 753 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
DCLRE1AQ6PJP8 NUDT16L1-203ENST00000586252 922 ntTSL 3 BASIC20.35■□□□□ 0.85
DCLRE1AQ6PJP8 EEF2KMT-206ENST00000587133 873 ntAPPRIS ALT2 TSL 3 BASIC20.35■□□□□ 0.85
DCLRE1AQ6PJP8 WDR88-203ENST00000592765 651 ntTSL 5 BASIC20.35■□□□□ 0.85
DCLRE1AQ6PJP8 L34079.3-201ENST00000600242 546 ntTSL 4 BASIC20.35■□□□□ 0.85
DCLRE1AQ6PJP8 NARS2-201ENST00000281038 2519 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
DCLRE1AQ6PJP8 KIF22-203ENST00000561482 2505 ntTSL 2 BASIC20.35■□□□□ 0.85
DCLRE1AQ6PJP8 SMIM10L2B-201ENST00000433425 2737 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
DCLRE1AQ6PJP8 BID-204ENST00000399767 2129 ntTSL 2 BASIC20.35■□□□□ 0.85
DCLRE1AQ6PJP8 Z82202.1-201ENST00000623446 1880 ntBASIC20.35■□□□□ 0.85
DCLRE1AQ6PJP8 RCN1-201ENST00000054950 2572 ntAPPRIS P2 TSL 1 (best) BASIC20.35■□□□□ 0.85
DCLRE1AQ6PJP8 JPT1-203ENST00000409753 1605 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
DCLRE1AQ6PJP8 SOX12-201ENST00000342665 4630 ntAPPRIS P1 BASIC20.34■□□□□ 0.85
DCLRE1AQ6PJP8 SUSD1-202ENST00000374263 2973 ntAPPRIS ALT2 TSL 2 BASIC20.34■□□□□ 0.85
DCLRE1AQ6PJP8 COPE-203ENST00000351079 907 ntTSL 2 BASIC20.34■□□□□ 0.85
DCLRE1AQ6PJP8 CCNG1-211ENST00000512163 919 ntTSL 2 BASIC20.34■□□□□ 0.85
DCLRE1AQ6PJP8 MOK-234ENST00000524370 1165 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
DCLRE1AQ6PJP8 AKTIP-212ENST00000570004 1162 ntAPPRIS P3 TSL 1 (best) BASIC20.34■□□□□ 0.85
DCLRE1AQ6PJP8 NT5C-210ENST00000582160 860 ntTSL 2 BASIC20.34■□□□□ 0.85
DCLRE1AQ6PJP8 JOSD2-204ENST00000598418 996 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
DCLRE1AQ6PJP8 MYC-208ENST00000641036 567 ntBASIC20.34■□□□□ 0.85
DCLRE1AQ6PJP8 RDH13-203ENST00000415061 1871 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
DCLRE1AQ6PJP8 DBNL-217ENST00000468694 2068 ntAPPRIS ALT2 TSL 2 BASIC20.34■□□□□ 0.85
DCLRE1AQ6PJP8 RELT-202ENST00000393580 2669 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
DCLRE1AQ6PJP8 PUF60-202ENST00000349157 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
DCLRE1AQ6PJP8 EFHC1-206ENST00000635760 2030 ntTSL 5 BASIC20.34■□□□□ 0.85
DCLRE1AQ6PJP8 FAM83E-201ENST00000263266 1926 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
DCLRE1AQ6PJP8 RRS1-201ENST00000320270 1706 ntAPPRIS P1 BASIC20.33■□□□□ 0.85
DCLRE1AQ6PJP8 PCCB-216ENST00000483687 1727 ntTSL 3 BASIC20.33■□□□□ 0.85
DCLRE1AQ6PJP8 NDUFB9-206ENST00000522532 1319 ntTSL 2 BASIC20.33■□□□□ 0.85
DCLRE1AQ6PJP8 TH-203ENST00000352909 1889 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
DCLRE1AQ6PJP8 TMEM189-201ENST00000371650 2222 ntAPPRIS ALT1 TSL 1 (best) BASIC20.33■□□□□ 0.85
DCLRE1AQ6PJP8 DUSP1-201ENST00000239223 2019 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.85
DCLRE1AQ6PJP8 ABCD1-202ENST00000370129 1016 ntTSL 2 BASIC20.33■□□□□ 0.85
DCLRE1AQ6PJP8 IMP3-202ENST00000403490 1237 ntAPPRIS P1 BASIC20.33■□□□□ 0.85
DCLRE1AQ6PJP8 AC009947.2-201ENST00000444014 672 ntBASIC20.33■□□□□ 0.85
DCLRE1AQ6PJP8 AC004080.5-201ENST00000498652 368 ntTSL 1 (best) BASIC20.33■□□□□ 0.85
DCLRE1AQ6PJP8 AZIN1-AS1-214ENST00000522850 473 ntTSL 3 BASIC20.33■□□□□ 0.85
DCLRE1AQ6PJP8 MRPL46-202ENST00000558531 1002 ntTSL 2 BASIC20.33■□□□□ 0.85
DCLRE1AQ6PJP8 AC091076.1-201ENST00000610741 619 ntBASIC20.33■□□□□ 0.85
DCLRE1AQ6PJP8 HDAC1-201ENST00000373548 2124 ntAPPRIS P1 TSL 1 (best) BASIC20.33■□□□□ 0.84
DCLRE1AQ6PJP8 PHKG2-202ENST00000424889 1566 ntTSL 2 BASIC20.33■□□□□ 0.84
DCLRE1AQ6PJP8 PARP2-202ENST00000429687 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC20.33■□□□□ 0.84
DCLRE1AQ6PJP8 ASMTL-206ENST00000534940 2048 ntTSL 2 BASIC20.32■□□□□ 0.84
DCLRE1AQ6PJP8 TMPRSS6-207ENST00000442782 1695 ntTSL 1 (best) BASIC20.32■□□□□ 0.84
DCLRE1AQ6PJP8 CIRBP-201ENST00000320936 1328 ntAPPRIS P3 TSL 1 (best) BASIC20.32■□□□□ 0.84
DCLRE1AQ6PJP8 CIRBP-207ENST00000586472 1303 ntAPPRIS P3 TSL 3 BASIC20.32■□□□□ 0.84
DCLRE1AQ6PJP8 PCDHB11-202ENST00000624887 1973 ntTSL 2 BASIC20.32■□□□□ 0.84
DCLRE1AQ6PJP8 FBXL16-203ENST00000562563 2257 ntTSL 2 BASIC20.32■□□□□ 0.84
DCLRE1AQ6PJP8 ACD-214ENST00000620338 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
DCLRE1AQ6PJP8 CACNA1B-201ENST00000277549 7158 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
DCLRE1AQ6PJP8 CACNA1B-202ENST00000277551 7158 ntAPPRIS ALT2 TSL 5 BASIC20.32■□□□□ 0.84
DCLRE1AQ6PJP8 UPK3B-201ENST00000257632 1296 ntAPPRIS P5 TSL 2 BASIC20.32■□□□□ 0.84
DCLRE1AQ6PJP8 YPEL3-201ENST00000398838 935 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
DCLRE1AQ6PJP8 AL031133.1-201ENST00000406807 723 ntBASIC20.32■□□□□ 0.84
DCLRE1AQ6PJP8 AC019068.1-202ENST00000483218 768 ntTSL 3 BASIC20.32■□□□□ 0.84
DCLRE1AQ6PJP8 C5orf49-202ENST00000509627 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
DCLRE1AQ6PJP8 IFI27L2-206ENST00000556727 556 ntTSL 3 BASIC20.32■□□□□ 0.84
DCLRE1AQ6PJP8 ETFA-216ENST00000560726 942 ntTSL 3 BASIC20.32■□□□□ 0.84
DCLRE1AQ6PJP8 YIPF2-209ENST00000590329 958 ntTSL 5 BASIC20.32■□□□□ 0.84
DCLRE1AQ6PJP8 CR769767.2-201ENST00000622735 460 ntBASIC20.32■□□□□ 0.84
DCLRE1AQ6PJP8 CRADD-202ENST00000542893 1403 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
DCLRE1AQ6PJP8 AC116565.2-201ENST00000637674 1854 ntTSL 2 BASIC20.32■□□□□ 0.84
DCLRE1AQ6PJP8 LIMS2-207ENST00000409808 2315 ntAPPRIS ALT1 TSL 5 BASIC20.32■□□□□ 0.84
DCLRE1AQ6PJP8 AC233280.1-201ENST00000423600 1684 ntTSL 2 BASIC20.32■□□□□ 0.84
DCLRE1AQ6PJP8 IFRD1-201ENST00000005558 1834 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
DCLRE1AQ6PJP8 DALRD3-201ENST00000313778 1968 ntTSL 2 BASIC20.32■□□□□ 0.84
DCLRE1AQ6PJP8 PLSCR3-212ENST00000576201 1965 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
DCLRE1AQ6PJP8 OTOP2-201ENST00000331427 2147 ntAPPRIS P1 TSL 5 BASIC20.32■□□□□ 0.84
DCLRE1AQ6PJP8 CRYZL1-203ENST00000381540 1482 ntTSL 2 BASIC20.31■□□□□ 0.84
DCLRE1AQ6PJP8 ART1-201ENST00000250693 1312 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
DCLRE1AQ6PJP8 FAM53A-202ENST00000461064 2159 ntAPPRIS P1 TSL 2 BASIC20.31■□□□□ 0.84
DCLRE1AQ6PJP8 MIXL1-201ENST00000366810 2005 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
DCLRE1AQ6PJP8 MAFG-AS1-201ENST00000582106 1895 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
DCLRE1AQ6PJP8 GDF5OS-201ENST00000374375 1734 ntAPPRIS P1 TSL 2 BASIC20.31■□□□□ 0.84
DCLRE1AQ6PJP8 HNRNPA3-204ENST00000435711 1731 ntAPPRIS P3 TSL 1 (best) BASIC20.31■□□□□ 0.84
DCLRE1AQ6PJP8 BTNL9-210ENST00000515271 1444 ntTSL 2 BASIC20.31■□□□□ 0.84
DCLRE1AQ6PJP8 GRIN1-208ENST00000371561 5149 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
DCLRE1AQ6PJP8 PYDC1-201ENST00000302964 813 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
DCLRE1AQ6PJP8 DENND6A-201ENST00000311128 4655 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
DCLRE1AQ6PJP8 ZNF32-201ENST00000374433 1137 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
DCLRE1AQ6PJP8 UBE2C-206ENST00000405520 641 ntTSL 2 BASIC20.31■□□□□ 0.84
DCLRE1AQ6PJP8 AC114763.1-202ENST00000414911 867 ntTSL 3 BASIC20.31■□□□□ 0.84
DCLRE1AQ6PJP8 ISOC2-202ENST00000425675 998 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
DCLRE1AQ6PJP8 TMA7-201ENST00000438607 561 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
DCLRE1AQ6PJP8 TMEM41B-203ENST00000527813 803 ntTSL 5 BASIC20.31■□□□□ 0.84
DCLRE1AQ6PJP8 REEP1-207ENST00000535845 1196 ntTSL 2 BASIC20.31■□□□□ 0.84
DCLRE1AQ6PJP8 DUX4-205ENST00000570263 768 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
DCLRE1AQ6PJP8 UBE2C-208ENST00000617055 705 ntTSL 3 BASIC20.31■□□□□ 0.84
Retrieved 100 of 98,524 protein–RNA pairs in 41.5 ms