Protein–RNA interactions for Protein: Q6IN85

PPP4R3A, Serine/threonine-protein phosphatase 4 regulatory subunit 3A, humanhuman

Predictions only

Length 833 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R3AQ6IN85 ATRN-201ENST00000262919 8633 ntAPPRIS P4 TSL 5 BASIC21.64■■□□□ 1.06
PPP4R3AQ6IN85 AC124066.1-201ENST00000581122 1660 ntTSL 5 BASIC21.64■■□□□ 1.05
PPP4R3AQ6IN85 EMC6-201ENST00000248378 653 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
PPP4R3AQ6IN85 TSPAN14-205ENST00000372158 1095 ntAPPRIS P1 TSL 5 BASIC21.64■■□□□ 1.05
PPP4R3AQ6IN85 PLEKHB2-203ENST00000404460 1167 ntTSL 2 BASIC21.64■■□□□ 1.05
PPP4R3AQ6IN85 SLC25A1P4-201ENST00000567977 778 ntBASIC21.64■■□□□ 1.05
PPP4R3AQ6IN85 ASRGL1-211ENST00000628829 1161 ntTSL 1 (best) BASIC21.64■■□□□ 1.05
PPP4R3AQ6IN85 CFAP100-203ENST00000505024 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC21.64■■□□□ 1.05
PPP4R3AQ6IN85 PGS1-201ENST00000262764 2201 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
PPP4R3AQ6IN85 TCP11-204ENST00000373979 1882 ntAPPRIS P3 TSL 5 BASIC21.64■■□□□ 1.05
PPP4R3AQ6IN85 UCHL5-202ENST00000367449 1507 ntAPPRIS ALT1 TSL 1 (best) BASIC21.64■■□□□ 1.05
PPP4R3AQ6IN85 MON1A-202ENST00000417270 2527 ntAPPRIS ALT2 TSL 5 BASIC21.64■■□□□ 1.05
PPP4R3AQ6IN85 ACY1-201ENST00000404366 1473 ntAPPRIS P1 TSL 1 (best) BASIC21.64■■□□□ 1.05
PPP4R3AQ6IN85 AL445686.2-201ENST00000577528 1445 ntTSL 3 BASIC21.63■■□□□ 1.05
PPP4R3AQ6IN85 FBLN7-202ENST00000331203 2301 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
PPP4R3AQ6IN85 KRT13-202ENST00000336861 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC21.63■■□□□ 1.05
PPP4R3AQ6IN85 ROR1-201ENST00000371079 5832 ntAPPRIS P2 TSL 1 (best) BASIC21.63■■□□□ 1.05
PPP4R3AQ6IN85 CPQ-201ENST00000220763 1947 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
PPP4R3AQ6IN85 BRAF-201ENST00000288602 2480 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
PPP4R3AQ6IN85 KRAS-201ENST00000256078 1119 ntAPPRIS P4 TSL 1 (best) BASIC21.63■■□□□ 1.05
PPP4R3AQ6IN85 ID1-202ENST00000376112 994 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
PPP4R3AQ6IN85 MFAP1P1-201ENST00000442257 1255 ntBASIC21.63■■□□□ 1.05
PPP4R3AQ6IN85 HOXB8-201ENST00000239144 1823 ntAPPRIS P2 TSL 2 BASIC21.63■■□□□ 1.05
PPP4R3AQ6IN85 EVL-202ENST00000402714 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC21.63■■□□□ 1.05
PPP4R3AQ6IN85 PDZD7-201ENST00000370215 2032 ntTSL 2 BASIC21.63■■□□□ 1.05
PPP4R3AQ6IN85 ZNF280B-203ENST00000626650 5721 ntAPPRIS P1 TSL 2 BASIC21.63■■□□□ 1.05
PPP4R3AQ6IN85 COL13A1-201ENST00000354547 3027 ntAPPRIS ALT2 TSL 5 BASIC21.63■■□□□ 1.05
PPP4R3AQ6IN85 SMARCC1-201ENST00000254480 6375 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
PPP4R3AQ6IN85 CYP2D6-201ENST00000359033 1433 ntTSL 1 (best) BASIC21.63■■□□□ 1.05
PPP4R3AQ6IN85 XYLT1-201ENST00000261381 9891 ntAPPRIS P1 TSL 1 (best) BASIC21.63■■□□□ 1.05
PPP4R3AQ6IN85 RENBP-202ENST00000393700 1388 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
PPP4R3AQ6IN85 GPR137-204ENST00000438980 1596 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
PPP4R3AQ6IN85 SLC25A29-215ENST00000556505 1540 ntTSL 2 BASIC21.62■■□□□ 1.05
PPP4R3AQ6IN85 GPR35-201ENST00000319838 2249 ntAPPRIS P3 TSL 2 BASIC21.62■■□□□ 1.05
PPP4R3AQ6IN85 GPR146-201ENST00000397095 1969 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
PPP4R3AQ6IN85 PIN1-201ENST00000247970 997 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
PPP4R3AQ6IN85 VCY1B-201ENST00000250823 550 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
PPP4R3AQ6IN85 VCY-201ENST00000250825 550 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
PPP4R3AQ6IN85 GPM6B-204ENST00000398361 1033 ntTSL 2 BASIC21.62■■□□□ 1.05
PPP4R3AQ6IN85 AL390719.1-201ENST00000427998 977 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
PPP4R3AQ6IN85 FDX2-206ENST00000492239 773 ntTSL 2 BASIC21.62■■□□□ 1.05
PPP4R3AQ6IN85 SIVA1-207ENST00000556195 674 ntTSL 3 BASIC21.62■■□□□ 1.05
PPP4R3AQ6IN85 LGI3-202ENST00000424267 3114 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
PPP4R3AQ6IN85 LDHAL6A-202ENST00000396213 1716 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
PPP4R3AQ6IN85 YTHDC2-207ENST00000515883 2629 ntTSL 1 (best) BASIC21.62■■□□□ 1.05
PPP4R3AQ6IN85 UBL4A-202ENST00000369660 2382 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
PPP4R3AQ6IN85 MAFG-201ENST00000357736 5040 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
PPP4R3AQ6IN85 FAM109B-201ENST00000321753 2335 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
PPP4R3AQ6IN85 VSTM2A-203ENST00000404951 2521 ntTSL 5 BASIC21.62■■□□□ 1.05
PPP4R3AQ6IN85 CAMK4-210ENST00000512453 1640 ntAPPRIS P1 TSL 1 (best) BASIC21.62■■□□□ 1.05
PPP4R3AQ6IN85 TUBA4A-202ENST00000392088 2499 ntTSL 2 BASIC21.62■■□□□ 1.05
PPP4R3AQ6IN85 APIP-201ENST00000395787 1366 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
PPP4R3AQ6IN85 SCFD2-204ENST00000611795 1320 ntTSL 5 BASIC21.61■■□□□ 1.05
PPP4R3AQ6IN85 COL9A3-201ENST00000343916 2485 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
PPP4R3AQ6IN85 STARD10-213ENST00000538536 1678 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
PPP4R3AQ6IN85 PRR31-201ENST00000371629 978 ntTSL 2 BASIC21.61■■□□□ 1.05
PPP4R3AQ6IN85 TRPT1-203ENST00000394547 865 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
PPP4R3AQ6IN85 CRYGFP-201ENST00000418459 633 ntBASIC21.61■■□□□ 1.05
PPP4R3AQ6IN85 BX088651.1-201ENST00000540551 451 ntBASIC21.61■■□□□ 1.05
PPP4R3AQ6IN85 TSTD3-202ENST00000636394 336 ntAPPRIS ALT2 TSL 3 BASIC21.61■■□□□ 1.05
PPP4R3AQ6IN85 GLDC-219ENST00000640208 420 ntTSL 2 BASIC21.61■■□□□ 1.05
PPP4R3AQ6IN85 DPF1-209ENST00000456296 1562 ntAPPRIS P1 TSL 5 BASIC21.61■■□□□ 1.05
PPP4R3AQ6IN85 SLC6A18-201ENST00000324642 2121 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
PPP4R3AQ6IN85 C15orf56-202ENST00000623360 2129 ntTSL 2 BASIC21.61■■□□□ 1.05
PPP4R3AQ6IN85 SLC39A4-201ENST00000276833 2297 ntTSL 2 BASIC21.6■■□□□ 1.05
PPP4R3AQ6IN85 AC138932.1-201ENST00000534164 6830 ntBASIC21.6■■□□□ 1.05
PPP4R3AQ6IN85 PCCB-208ENST00000468777 1877 ntAPPRIS ALT2 TSL 3 BASIC21.6■■□□□ 1.05
PPP4R3AQ6IN85 PLA2G15-202ENST00000413021 1346 ntTSL 2 BASIC21.6■■□□□ 1.05
PPP4R3AQ6IN85 ASMTL-201ENST00000381317 2027 ntAPPRIS P3 TSL 1 (best) BASIC21.6■■□□□ 1.05
PPP4R3AQ6IN85 KLF16-201ENST00000250916 2890 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
PPP4R3AQ6IN85 NAPA-210ENST00000595227 1460 ntTSL 3 BASIC21.6■■□□□ 1.05
PPP4R3AQ6IN85 TMEM191A-208ENST00000450925 1961 ntTSL 2 BASIC21.6■■□□□ 1.05
PPP4R3AQ6IN85 HCRT-201ENST00000293330 577 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
PPP4R3AQ6IN85 ANK1-211ENST00000522231 1060 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
PPP4R3AQ6IN85 ANK1-212ENST00000522543 1160 ntTSL 2 BASIC21.6■■□□□ 1.05
PPP4R3AQ6IN85 L34079.3-201ENST00000600242 546 ntTSL 4 BASIC21.6■■□□□ 1.05
PPP4R3AQ6IN85 POLE2-202ENST00000539565 1792 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
PPP4R3AQ6IN85 SELENOF-207ENST00000611507 1785 ntTSL 5 BASIC21.6■■□□□ 1.05
PPP4R3AQ6IN85 CDAN1-201ENST00000356231 4637 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
PPP4R3AQ6IN85 GPR142-201ENST00000335666 1437 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
PPP4R3AQ6IN85 ATF5-201ENST00000423777 2069 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
PPP4R3AQ6IN85 C2orf81-201ENST00000290390 2227 ntAPPRIS P5 TSL 5 BASIC21.6■■□□□ 1.05
PPP4R3AQ6IN85 AC044802.1-201ENST00000501143 2894 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
PPP4R3AQ6IN85 TFDP2-202ENST00000467072 1853 ntAPPRIS P3 TSL 1 (best) BASIC21.6■■□□□ 1.05
PPP4R3AQ6IN85 CHMP4A-201ENST00000347519 1393 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
PPP4R3AQ6IN85 REEP2-202ENST00000378339 2170 ntAPPRIS ALT1 TSL 1 (best) BASIC21.6■■□□□ 1.05
PPP4R3AQ6IN85 NKX6-1-201ENST00000295886 2628 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
PPP4R3AQ6IN85 SLC3A2-202ENST00000377889 1993 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
PPP4R3AQ6IN85 BRSK1-201ENST00000309383 3079 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
PPP4R3AQ6IN85 LONRF3-202ENST00000371628 2550 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
PPP4R3AQ6IN85 AC004890.2-202ENST00000463462 1494 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
PPP4R3AQ6IN85 OTOP3-201ENST00000328801 2363 ntAPPRIS P1 TSL 2 BASIC21.59■■□□□ 1.05
PPP4R3AQ6IN85 NEU4-203ENST00000404257 2352 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
PPP4R3AQ6IN85 OR10H2-201ENST00000305899 1041 ntAPPRIS P1 BASIC21.59■■□□□ 1.05
PPP4R3AQ6IN85 COX5A-201ENST00000322347 1268 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
PPP4R3AQ6IN85 SYNDIG1L-201ENST00000331628 2607 ntAPPRIS P1 TSL 5 BASIC21.59■■□□□ 1.05
PPP4R3AQ6IN85 SEPT6-202ENST00000354228 1576 ntAPPRIS P4 TSL 1 (best) BASIC21.59■■□□□ 1.05
PPP4R3AQ6IN85 ZFYVE1-202ENST00000394207 1183 ntTSL 2 BASIC21.59■■□□□ 1.05
PPP4R3AQ6IN85 MIR1238-201ENST00000408483 83 ntBASIC21.59■■□□□ 1.05
PPP4R3AQ6IN85 AL365295.1-202ENST00000456100 562 ntTSL 4 BASIC21.59■■□□□ 1.05
Retrieved 100 of 98,524 protein–RNA pairs in 23.5 ms