Protein–RNA interactions for Protein: Q5VTQ0

TTC39B, Tetratricopeptide repeat protein 39B, humanhuman

Predicted RBP Predictions only

Length 682 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39BQ5VTQ0 GTF3C5-201ENST00000342018 1905 ntTSL 5 BASIC19.83■□□□□ 0.77
TTC39BQ5VTQ0 MB21D1-202ENST00000370318 1917 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
TTC39BQ5VTQ0 KIAA1522-201ENST00000294521 878 ntAPPRIS ALT2 TSL 2 BASIC19.83■□□□□ 0.77
TTC39BQ5VTQ0 HBA1-201ENST00000320868 577 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
TTC39BQ5VTQ0 HOXA9-202ENST00000396345 797 ntTSL 2 BASIC19.83■□□□□ 0.77
TTC39BQ5VTQ0 AC009487.1-202ENST00000437683 402 ntTSL 2 BASIC19.83■□□□□ 0.77
TTC39BQ5VTQ0 FAM207BP-201ENST00000447172 505 ntBASIC19.83■□□□□ 0.77
TTC39BQ5VTQ0 AL445645.1-201ENST00000451318 1019 ntTSL 2 BASIC19.83■□□□□ 0.77
TTC39BQ5VTQ0 FITM1-202ENST00000559294 800 ntBASIC19.83■□□□□ 0.77
TTC39BQ5VTQ0 AP005242.2-201ENST00000580065 1175 ntBASIC19.83■□□□□ 0.77
TTC39BQ5VTQ0 CIRBP-217ENST00000588230 1013 ntTSL 5 BASIC19.83■□□□□ 0.77
TTC39BQ5VTQ0 KLHL26-205ENST00000599006 989 ntTSL 5 BASIC19.83■□□□□ 0.77
TTC39BQ5VTQ0 AC020913.2-201ENST00000601929 629 ntTSL 5 BASIC19.83■□□□□ 0.77
TTC39BQ5VTQ0 AP000525.1-201ENST00000608286 694 ntBASIC19.83■□□□□ 0.77
TTC39BQ5VTQ0 AC016737.2-201ENST00000609273 358 ntTSL 3 BASIC19.83■□□□□ 0.77
TTC39BQ5VTQ0 ANKRD54-211ENST00000609454 825 ntTSL 3 BASIC19.83■□□□□ 0.77
TTC39BQ5VTQ0 CROCCP2-205ENST00000639481 1296 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
TTC39BQ5VTQ0 TMEM25-203ENST00000354284 1456 ntTSL 2 BASIC19.83■□□□□ 0.76
TTC39BQ5VTQ0 AC079598.2-202ENST00000546624 1451 ntBASIC19.83■□□□□ 0.76
TTC39BQ5VTQ0 ANKRD29-201ENST00000322980 1658 ntTSL 2 BASIC19.83■□□□□ 0.76
TTC39BQ5VTQ0 HIKESHI-207ENST00000533986 1694 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
TTC39BQ5VTQ0 ENOPH1-203ENST00000509635 1874 ntTSL 3 BASIC19.83■□□□□ 0.76
TTC39BQ5VTQ0 AC138356.1-201ENST00000330539 2086 ntTSL 2 BASIC19.83■□□□□ 0.76
TTC39BQ5VTQ0 BLACE-201ENST00000378120 2456 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
TTC39BQ5VTQ0 IL1R1-205ENST00000410023 5143 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
TTC39BQ5VTQ0 MTX1-202ENST00000368376 1632 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
TTC39BQ5VTQ0 ARMC6-220ENST00000546344 1814 ntTSL 2 BASIC19.83■□□□□ 0.76
TTC39BQ5VTQ0 EEF1A2-201ENST00000217182 2006 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
TTC39BQ5VTQ0 GPC5-201ENST00000377067 2957 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
TTC39BQ5VTQ0 KCNA3-201ENST00000369769 2569 ntAPPRIS P1 BASIC19.83■□□□□ 0.76
TTC39BQ5VTQ0 EVL-202ENST00000402714 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC19.83■□□□□ 0.76
TTC39BQ5VTQ0 AC148477.3-202ENST00000376617 1766 ntTSL 2 BASIC19.83■□□□□ 0.76
TTC39BQ5VTQ0 APIP-201ENST00000395787 1366 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
TTC39BQ5VTQ0 CPXM2-204ENST00000615851 2512 ntTSL 5 BASIC19.82■□□□□ 0.76
TTC39BQ5VTQ0 CACNA1A-246ENST00000637736 8340 ntAPPRIS ALT2 TSL 5 BASIC19.82■□□□□ 0.76
TTC39BQ5VTQ0 LINC01465-201ENST00000408887 1940 ntBASIC19.82■□□□□ 0.76
TTC39BQ5VTQ0 SLC22A18-202ENST00000347936 1542 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
TTC39BQ5VTQ0 IMMP2L-202ENST00000405709 1522 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
TTC39BQ5VTQ0 EVC-201ENST00000264956 6431 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
TTC39BQ5VTQ0 CHMP6-201ENST00000325167 1664 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
TTC39BQ5VTQ0 ST3GAL4-205ENST00000449406 1669 ntTSL 5 BASIC19.82■□□□□ 0.76
TTC39BQ5VTQ0 EIF4E3-201ENST00000295612 2764 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
TTC39BQ5VTQ0 MMP23A-201ENST00000234610 1017 ntBASIC19.82■□□□□ 0.76
TTC39BQ5VTQ0 KRAS-201ENST00000256078 1119 ntAPPRIS P4 TSL 1 (best) BASIC19.82■□□□□ 0.76
TTC39BQ5VTQ0 HLA-DRB1-201ENST00000360004 1229 ntAPPRIS P1 BASIC19.82■□□□□ 0.76
TTC39BQ5VTQ0 ID1-202ENST00000376112 994 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
TTC39BQ5VTQ0 RABL2A-202ENST00000393165 1118 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
TTC39BQ5VTQ0 TLCD1-202ENST00000394933 784 ntTSL 2 BASIC19.82■□□□□ 0.76
TTC39BQ5VTQ0 COL11A2-204ENST00000395194 1194 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
TTC39BQ5VTQ0 HYAL3-203ENST00000415204 959 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
TTC39BQ5VTQ0 TSPY15P-201ENST00000457163 923 ntBASIC19.82■□□□□ 0.76
TTC39BQ5VTQ0 AC091390.4-202ENST00000476426 537 ntBASIC19.82■□□□□ 0.76
TTC39BQ5VTQ0 RPS20-210ENST00000523936 899 ntTSL 2 BASIC19.82■□□□□ 0.76
TTC39BQ5VTQ0 ANKRD40-201ENST00000285243 4184 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
TTC39BQ5VTQ0 NRXN1-208ENST00000405472 5724 ntAPPRIS ALT2 TSL 5 BASIC19.82■□□□□ 0.76
TTC39BQ5VTQ0 SLC35E2-201ENST00000246421 1430 ntAPPRIS P3 TSL 1 (best) BASIC19.82■□□□□ 0.76
TTC39BQ5VTQ0 SKOR2-202ENST00000425639 3899 ntAPPRIS ALT2 TSL 5 BASIC19.82■□□□□ 0.76
TTC39BQ5VTQ0 ADORA2A-215ENST00000618076 2630 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
TTC39BQ5VTQ0 WT1-205ENST00000452863 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC19.82■□□□□ 0.76
TTC39BQ5VTQ0 IRF7-203ENST00000397566 2051 ntAPPRIS P4 TSL 1 (best) BASIC19.82■□□□□ 0.76
TTC39BQ5VTQ0 RENBP-202ENST00000393700 1388 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
TTC39BQ5VTQ0 DNAJC11-201ENST00000294401 2210 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
TTC39BQ5VTQ0 PCBP3-206ENST00000400314 2202 ntAPPRIS P2 TSL 5 BASIC19.82■□□□□ 0.76
TTC39BQ5VTQ0 ACTL6A-201ENST00000392662 1899 ntTSL 2 BASIC19.82■□□□□ 0.76
TTC39BQ5VTQ0 AC126773.2-201ENST00000562172 1682 ntTSL 3 BASIC19.81■□□□□ 0.76
TTC39BQ5VTQ0 LEMD2-201ENST00000293760 2958 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
TTC39BQ5VTQ0 MEN1-206ENST00000377321 2614 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
TTC39BQ5VTQ0 NECAB3-202ENST00000375238 1942 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
TTC39BQ5VTQ0 ACP1-205ENST00000407983 703 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
TTC39BQ5VTQ0 AC005056.1-201ENST00000435932 532 ntTSL 4 BASIC19.81■□□□□ 0.76
TTC39BQ5VTQ0 STXBP1-203ENST00000476182 566 ntTSL 5 BASIC19.81■□□□□ 0.76
TTC39BQ5VTQ0 LINC01184-202ENST00000501173 949 ntTSL 5 BASIC19.81■□□□□ 0.76
TTC39BQ5VTQ0 USP46-AS1-201ENST00000503051 1048 ntTSL 3 BASIC19.81■□□□□ 0.76
TTC39BQ5VTQ0 AHRR-204ENST00000506456 2350 ntTSL 2 BASIC19.81■□□□□ 0.76
TTC39BQ5VTQ0 ZDHHC3-205ENST00000424952 2687 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
TTC39BQ5VTQ0 GABBR1-202ENST00000376977 1739 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
TTC39BQ5VTQ0 LINC00315-201ENST00000441947 2323 ntTSL 5 BASIC19.81■□□□□ 0.76
TTC39BQ5VTQ0 TUBA8-201ENST00000316027 1518 ntTSL 2 BASIC19.81■□□□□ 0.76
TTC39BQ5VTQ0 KRT8P41-201ENST00000533985 1514 ntBASIC19.81■□□□□ 0.76
TTC39BQ5VTQ0 ACTR3B-203ENST00000397282 1692 ntTSL 2 BASIC19.81■□□□□ 0.76
TTC39BQ5VTQ0 MEF2B-201ENST00000409224 1683 ntTSL 2 BASIC19.81■□□□□ 0.76
TTC39BQ5VTQ0 MUTYH-203ENST00000372098 1839 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
TTC39BQ5VTQ0 MUTYH-204ENST00000372104 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
TTC39BQ5VTQ0 MUTYH-205ENST00000372110 1809 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
TTC39BQ5VTQ0 SLC5A10-205ENST00000417251 1984 ntTSL 2 BASIC19.81■□□□□ 0.76
TTC39BQ5VTQ0 DYNC1LI2-201ENST00000258198 4515 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
TTC39BQ5VTQ0 AUTS2-201ENST00000342771 6173 ntAPPRIS P3 TSL 1 (best) BASIC19.81■□□□□ 0.76
TTC39BQ5VTQ0 MAPK9-208ENST00000455781 4336 ntAPPRIS ALT1 TSL 2 BASIC19.8■□□□□ 0.76
TTC39BQ5VTQ0 NUTM2D-201ENST00000381697 3290 ntAPPRIS P5 TSL 1 (best) BASIC19.8■□□□□ 0.76
TTC39BQ5VTQ0 TNFRSF8-202ENST00000413146 2363 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
TTC39BQ5VTQ0 SAMD14-203ENST00000503131 1938 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
TTC39BQ5VTQ0 KCNIP4-206ENST00000447367 1641 ntTSL 5 BASIC19.8■□□□□ 0.76
TTC39BQ5VTQ0 NAT6-204ENST00000443094 1464 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
TTC39BQ5VTQ0 ZNRF3-203ENST00000544604 6851 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
TTC39BQ5VTQ0 SPAST-203ENST00000615843 5212 ntAPPRIS P4 TSL 1 (best) BASIC19.8■□□□□ 0.76
TTC39BQ5VTQ0 CYP46A1-202ENST00000380228 1597 ntTSL 2 BASIC19.8■□□□□ 0.76
TTC39BQ5VTQ0 C6orf89-203ENST00000373685 1400 ntAPPRIS ALT2 TSL 5 BASIC19.8■□□□□ 0.76
TTC39BQ5VTQ0 EMC6-201ENST00000248378 653 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
TTC39BQ5VTQ0 PTS-201ENST00000280362 935 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
TTC39BQ5VTQ0 AKNA-205ENST00000374079 2138 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 22.7 ms