Protein–RNA interactions for Protein: Q4JDL3

PTPN20, Tyrosine-protein phosphatase non-receptor type 20, humanhuman

Predictions only

Length 420 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN20Q4JDL3 DAB1-202ENST00000371230 1150 ntTSL 5 BASIC20.05■□□□□ 0.8
PTPN20Q4JDL3 VSIG2-202ENST00000403470 1191 ntTSL 2 BASIC20.05■□□□□ 0.8
PTPN20Q4JDL3 SPAG16-207ENST00000432529 1250 ntTSL 1 (best) BASIC20.05■□□□□ 0.8
PTPN20Q4JDL3 AL355355.2-201ENST00000442321 338 ntBASIC20.05■□□□□ 0.8
PTPN20Q4JDL3 AP003071.4-201ENST00000562276 1284 ntBASIC20.05■□□□□ 0.8
PTPN20Q4JDL3 TNFRSF12A-206ENST00000575124 1133 ntTSL 2 BASIC20.05■□□□□ 0.8
PTPN20Q4JDL3 ZNF667-AS1-208ENST00000594783 475 ntTSL 3 BASIC20.05■□□□□ 0.8
PTPN20Q4JDL3 SMAGP-204ENST00000603838 816 ntTSL 2 BASIC20.05■□□□□ 0.8
PTPN20Q4JDL3 SQSTM1-216ENST00000626660 274 ntTSL 5 BASIC20.05■□□□□ 0.8
PTPN20Q4JDL3 DECR2-212ENST00000627716 352 ntTSL 2 BASIC20.05■□□□□ 0.8
PTPN20Q4JDL3 AC097662.2-201ENST00000641359 267 ntAPPRIS P1 BASIC20.05■□□□□ 0.8
PTPN20Q4JDL3 CMTM7-201ENST00000334983 2038 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
PTPN20Q4JDL3 AC069544.2-201ENST00000640019 2528 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
PTPN20Q4JDL3 AC093503.3-201ENST00000624917 2352 ntBASIC20.05■□□□□ 0.8
PTPN20Q4JDL3 SLC25A47-201ENST00000361529 1738 ntAPPRIS P1 TSL 1 (best) BASIC20.05■□□□□ 0.8
PTPN20Q4JDL3 DLGAP4-206ENST00000475894 3110 ntAPPRIS ALT2 TSL 2 BASIC20.05■□□□□ 0.8
PTPN20Q4JDL3 PLEKHH3-204ENST00000591022 2983 ntAPPRIS P2 TSL 1 (best) BASIC20.04■□□□□ 0.8
PTPN20Q4JDL3 ASGR1-208ENST00000574388 1552 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
PTPN20Q4JDL3 HCN1-202ENST00000634658 4738 ntTSL 3 BASIC20.04■□□□□ 0.8
PTPN20Q4JDL3 AC004408.2-201ENST00000623613 2777 ntBASIC20.04■□□□□ 0.8
PTPN20Q4JDL3 MEPCE-202ENST00000414441 2261 ntTSL 2 BASIC20.04■□□□□ 0.8
PTPN20Q4JDL3 SLC31A2-201ENST00000259392 1785 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
PTPN20Q4JDL3 ACVR1C-203ENST00000348328 1270 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
PTPN20Q4JDL3 FAM26F-202ENST00000368605 1117 ntAPPRIS P1 TSL 5 BASIC20.04■□□□□ 0.8
PTPN20Q4JDL3 RHOC-203ENST00000369632 1026 ntAPPRIS P1 TSL 3 BASIC20.04■□□□□ 0.8
PTPN20Q4JDL3 CDKN1B-202ENST00000396340 897 ntTSL 3 BASIC20.04■□□□□ 0.8
PTPN20Q4JDL3 AC100839.1-201ENST00000559589 577 ntTSL 4 BASIC20.04■□□□□ 0.8
PTPN20Q4JDL3 TGIF1-222ENST00000577543 729 ntTSL 3 BASIC20.04■□□□□ 0.8
PTPN20Q4JDL3 AC005943.1-201ENST00000585937 1002 ntAPPRIS P1 TSL 3 BASIC20.04■□□□□ 0.8
PTPN20Q4JDL3 DGCR10-201ENST00000609839 495 ntBASIC20.04■□□□□ 0.8
PTPN20Q4JDL3 SENP6-201ENST00000327284 2700 ntTSL 2 BASIC20.04■□□□□ 0.8
PTPN20Q4JDL3 PCCB-208ENST00000468777 1877 ntAPPRIS ALT2 TSL 3 BASIC20.04■□□□□ 0.8
PTPN20Q4JDL3 ORAI2-204ENST00000473939 2493 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
PTPN20Q4JDL3 PLCB2-204ENST00000557821 4517 ntAPPRIS ALT1 TSL 1 (best) BASIC20.04■□□□□ 0.8
PTPN20Q4JDL3 EGFR-202ENST00000342916 2239 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
PTPN20Q4JDL3 PARS2-201ENST00000371279 2347 ntAPPRIS P1 TSL 1 (best) BASIC20.04■□□□□ 0.8
PTPN20Q4JDL3 SOX4-201ENST00000244745 5852 ntAPPRIS P1 BASIC20.04■□□□□ 0.8
PTPN20Q4JDL3 ANKMY1-209ENST00000405523 1827 ntTSL 1 (best) BASIC20.04■□□□□ 0.8
PTPN20Q4JDL3 CROCCP3-202ENST00000420820 1947 ntBASIC20.04■□□□□ 0.8
PTPN20Q4JDL3 CTBP2-214ENST00000531469 1918 ntAPPRIS P1 TSL 2 BASIC20.04■□□□□ 0.8
PTPN20Q4JDL3 PTGIR-201ENST00000291294 2107 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
PTPN20Q4JDL3 PFN2-203ENST00000452853 1780 ntAPPRIS ALT1 TSL 1 (best) BASIC20.03■□□□□ 0.8
PTPN20Q4JDL3 ANKDD1B-204ENST00000601380 2569 ntAPPRIS P1 TSL 5 BASIC20.03■□□□□ 0.8
PTPN20Q4JDL3 DNAJC28-204ENST00000617313 2237 ntAPPRIS P1 TSL 5 BASIC20.03■□□□□ 0.8
PTPN20Q4JDL3 AKIP1-207ENST00000529876 1421 ntTSL 2 BASIC20.03■□□□□ 0.8
PTPN20Q4JDL3 IL4I1-201ENST00000341114 2349 ntAPPRIS P4 TSL 1 (best) BASIC20.03■□□□□ 0.8
PTPN20Q4JDL3 CECR2-202ENST00000342247 6178 ntAPPRIS ALT2 TSL 5 BASIC20.03■□□□□ 0.8
PTPN20Q4JDL3 UCHL5-202ENST00000367449 1507 ntAPPRIS ALT1 TSL 1 (best) BASIC20.03■□□□□ 0.8
PTPN20Q4JDL3 ZFP69-202ENST00000372706 2871 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
PTPN20Q4JDL3 SLC39A4-201ENST00000276833 2297 ntTSL 2 BASIC20.03■□□□□ 0.8
PTPN20Q4JDL3 METTL27-201ENST00000297873 941 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
PTPN20Q4JDL3 ANKRD10-202ENST00000310847 1193 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
PTPN20Q4JDL3 C9orf129-201ENST00000375419 1154 ntAPPRIS P1 TSL 5 BASIC20.03■□□□□ 0.8
PTPN20Q4JDL3 USF2-203ENST00000379134 648 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
PTPN20Q4JDL3 MIR1302-2HG-202ENST00000473358 712 ntTSL 5 BASIC20.03■□□□□ 0.8
PTPN20Q4JDL3 AC003982.1-201ENST00000477404 484 ntTSL 2 BASIC20.03■□□□□ 0.8
PTPN20Q4JDL3 AC140725.1-202ENST00000561145 712 ntTSL 5 BASIC20.03■□□□□ 0.8
PTPN20Q4JDL3 KLHL26-205ENST00000599006 989 ntTSL 5 BASIC20.03■□□□□ 0.8
PTPN20Q4JDL3 TRIM74-201ENST00000285805 1350 ntAPPRIS P2 TSL 1 (best) BASIC20.03■□□□□ 0.8
PTPN20Q4JDL3 TRIM73-201ENST00000323819 1358 ntAPPRIS P2 TSL 1 (best) BASIC20.03■□□□□ 0.8
PTPN20Q4JDL3 AC096733.2-201ENST00000609937 1394 ntBASIC20.03■□□□□ 0.8
PTPN20Q4JDL3 RIPK2-201ENST00000220751 2584 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
PTPN20Q4JDL3 LRP8-204ENST00000371454 3322 ntAPPRIS ALT2 TSL 1 (best) BASIC20.03■□□□□ 0.8
PTPN20Q4JDL3 FGF2-201ENST00000264498 6775 ntTSL 1 (best) BASIC20.03■□□□□ 0.8
PTPN20Q4JDL3 VBP1-201ENST00000286428 1686 ntAPPRIS P1 TSL 1 (best) BASIC20.03■□□□□ 0.8
PTPN20Q4JDL3 SELENOF-207ENST00000611507 1785 ntTSL 5 BASIC20.03■□□□□ 0.8
PTPN20Q4JDL3 MYBL2-202ENST00000396863 2704 ntTSL 2 BASIC20.03■□□□□ 0.8
PTPN20Q4JDL3 FPGS-203ENST00000373247 2279 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
PTPN20Q4JDL3 KRT17-205ENST00000540235 1438 ntTSL 5 BASIC20.02■□□□□ 0.8
PTPN20Q4JDL3 ZHX3-212ENST00000558993 1528 ntTSL 5 BASIC20.02■□□□□ 0.8
PTPN20Q4JDL3 ABCC5-204ENST00000392579 1848 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
PTPN20Q4JDL3 TCP11-209ENST00000444780 1841 ntAPPRIS ALT2 TSL 2 BASIC20.02■□□□□ 0.8
PTPN20Q4JDL3 OCSTAMP-201ENST00000279028 2043 ntAPPRIS P1 TSL 5 BASIC20.02■□□□□ 0.8
PTPN20Q4JDL3 GRK6-201ENST00000355472 2939 ntAPPRIS P3 TSL 1 (best) BASIC20.02■□□□□ 0.8
PTPN20Q4JDL3 DUSP23-203ENST00000368109 729 ntAPPRIS P1 TSL 2 BASIC20.02■□□□□ 0.8
PTPN20Q4JDL3 PMVK-201ENST00000368467 1280 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
PTPN20Q4JDL3 USP46-AS1-201ENST00000503051 1048 ntTSL 3 BASIC20.02■□□□□ 0.8
PTPN20Q4JDL3 DHDH-203ENST00000522614 776 ntTSL 5 BASIC20.02■□□□□ 0.8
PTPN20Q4JDL3 UBALD1-209ENST00000591897 1275 ntTSL 2 BASIC20.02■□□□□ 0.8
PTPN20Q4JDL3 CRYBB2P1-202ENST00000382734 1364 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
PTPN20Q4JDL3 KLHL23-201ENST00000272797 2087 ntAPPRIS P1 TSL 2 BASIC20.02■□□□□ 0.8
PTPN20Q4JDL3 TRIM47-201ENST00000254816 2266 ntAPPRIS P1 TSL 1 (best) BASIC20.02■□□□□ 0.8
PTPN20Q4JDL3 CPNE7-201ENST00000268720 2657 ntTSL 1 (best) BASIC20.02■□□□□ 0.8
PTPN20Q4JDL3 ATP11C-203ENST00000370557 6924 ntAPPRIS ALT2 TSL 5 BASIC20.02■□□□□ 0.79
PTPN20Q4JDL3 MYC-201ENST00000259523 2042 ntTSL 1 (best) BASIC20.02■□□□□ 0.79
PTPN20Q4JDL3 CXXC4-201ENST00000394767 5565 ntAPPRIS P1 TSL 5 BASIC20.02■□□□□ 0.79
PTPN20Q4JDL3 ADPGK-201ENST00000311669 2557 ntAPPRIS P1 TSL 2 BASIC20.01■□□□□ 0.79
PTPN20Q4JDL3 SNAP47-202ENST00000366759 2362 ntAPPRIS P3 TSL 1 (best) BASIC20.01■□□□□ 0.79
PTPN20Q4JDL3 HIC1-207ENST00000619757 6711 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
PTPN20Q4JDL3 GAL3ST4-204ENST00000423751 1695 ntTSL 3 BASIC20.01■□□□□ 0.79
PTPN20Q4JDL3 EHBP1-209ENST00000431489 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
PTPN20Q4JDL3 LGALS7B-201ENST00000314980 483 ntAPPRIS P1 TSL 1 (best) BASIC20.01■□□□□ 0.79
PTPN20Q4JDL3 RFTN1-201ENST00000334133 2982 ntAPPRIS P2 TSL 1 (best) BASIC20.01■□□□□ 0.79
PTPN20Q4JDL3 SYNE4-202ENST00000340477 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC20.01■□□□□ 0.79
PTPN20Q4JDL3 DNPH1-202ENST00000393987 796 ntTSL 2 BASIC20.01■□□□□ 0.79
PTPN20Q4JDL3 AL357874.1-201ENST00000428948 574 ntTSL 1 (best) BASIC20.01■□□□□ 0.79
PTPN20Q4JDL3 FDX2-206ENST00000492239 773 ntTSL 2 BASIC20.01■□□□□ 0.79
PTPN20Q4JDL3 TARBP2-220ENST00000552857 916 ntTSL 5 BASIC20.01■□□□□ 0.79
PTPN20Q4JDL3 MIR4785-201ENST00000585005 73 ntBASIC20.01■□□□□ 0.79
PTPN20Q4JDL3 L34079.3-201ENST00000600242 546 ntTSL 4 BASIC20.01■□□□□ 0.79
Retrieved 100 of 98,524 protein–RNA pairs in 30.4 ms