Protein–RNA interactions for Protein: Q0D2K0

NIPAL4, Magnesium transporter NIPA4, humanhuman

Predictions only

Length 466 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NIPAL4Q0D2K0 TNNT1-208ENST00000587465 1065 ntAPPRIS ALT2 TSL 5 BASIC19.4■□□□□ 0.7
NIPAL4Q0D2K0 MIR6786-201ENST00000616843 113 ntBASIC19.4■□□□□ 0.7
NIPAL4Q0D2K0 AC011298.2-201ENST00000617989 482 ntBASIC19.4■□□□□ 0.7
NIPAL4Q0D2K0 AC066615.1-201ENST00000640911 628 ntBASIC19.4■□□□□ 0.7
NIPAL4Q0D2K0 SCARF2-202ENST00000622235 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
NIPAL4Q0D2K0 HSD11B1L-221ENST00000583928 1319 ntTSL 5 BASIC19.4■□□□□ 0.7
NIPAL4Q0D2K0 CDC42EP2-201ENST00000279249 2023 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
NIPAL4Q0D2K0 PDZD7-201ENST00000370215 2032 ntTSL 2 BASIC19.4■□□□□ 0.7
NIPAL4Q0D2K0 SLC39A1-209ENST00000537590 2022 ntTSL 2 BASIC19.4■□□□□ 0.7
NIPAL4Q0D2K0 TRAK2-202ENST00000430254 1436 ntTSL 2 BASIC19.4■□□□□ 0.7
NIPAL4Q0D2K0 CTSH-201ENST00000220166 2190 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
NIPAL4Q0D2K0 OTUD1-201ENST00000376495 2933 ntAPPRIS P1 BASIC19.4■□□□□ 0.7
NIPAL4Q0D2K0 RABEPK-202ENST00000373538 1504 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
NIPAL4Q0D2K0 C21orf58-205ENST00000397683 1674 ntAPPRIS ALT2 TSL 2 BASIC19.4■□□□□ 0.7
NIPAL4Q0D2K0 GOLGA6L5P-202ENST00000515341 1828 ntBASIC19.39■□□□□ 0.7
NIPAL4Q0D2K0 IFRD2-202ENST00000417626 2109 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
NIPAL4Q0D2K0 CLDND1-203ENST00000394181 2170 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
NIPAL4Q0D2K0 ZNF211-204ENST00000347302 2472 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
NIPAL4Q0D2K0 SPDYE2-201ENST00000341656 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
NIPAL4Q0D2K0 MIR718-201ENST00000390190 70 ntBASIC19.39■□□□□ 0.69
NIPAL4Q0D2K0 IGHV3-73-201ENST00000390636 437 ntAPPRIS P1 BASIC19.39■□□□□ 0.69
NIPAL4Q0D2K0 DERL1-203ENST00000419562 918 ntTSL 2 BASIC19.39■□□□□ 0.69
NIPAL4Q0D2K0 LINC01122-201ENST00000422723 675 ntTSL 3 BASIC19.39■□□□□ 0.69
NIPAL4Q0D2K0 AC005056.1-201ENST00000435932 532 ntTSL 4 BASIC19.39■□□□□ 0.69
NIPAL4Q0D2K0 SPDYE2B-202ENST00000455020 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
NIPAL4Q0D2K0 CHAC1-203ENST00000487220 853 ntTSL 3 BASIC19.39■□□□□ 0.69
NIPAL4Q0D2K0 AC103855.2-201ENST00000533315 573 ntTSL 4 BASIC19.39■□□□□ 0.69
NIPAL4Q0D2K0 IMPA2-208ENST00000589238 923 ntTSL 3 BASIC19.39■□□□□ 0.69
NIPAL4Q0D2K0 AC003005.1-201ENST00000601674 582 ntAPPRIS P5 TSL 2 BASIC19.39■□□□□ 0.69
NIPAL4Q0D2K0 FBXL17-205ENST00000542267 5188 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
NIPAL4Q0D2K0 KRT8P11-201ENST00000409686 1436 ntBASIC19.39■□□□□ 0.69
NIPAL4Q0D2K0 NAPA-210ENST00000595227 1460 ntTSL 3 BASIC19.39■□□□□ 0.69
NIPAL4Q0D2K0 GRM5-202ENST00000305447 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
NIPAL4Q0D2K0 CYP46A1-202ENST00000380228 1597 ntTSL 2 BASIC19.39■□□□□ 0.69
NIPAL4Q0D2K0 KTI12-201ENST00000371614 1714 ntAPPRIS P1 BASIC19.39■□□□□ 0.69
NIPAL4Q0D2K0 ACVR1B-205ENST00000541224 1791 ntTSL 2 BASIC19.39■□□□□ 0.69
NIPAL4Q0D2K0 NRN1-204ENST00000622188 1795 ntTSL 2 BASIC19.39■□□□□ 0.69
NIPAL4Q0D2K0 TFDP2-202ENST00000467072 1853 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.69
NIPAL4Q0D2K0 GJB6-204ENST00000400066 1927 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
NIPAL4Q0D2K0 HOXD10-201ENST00000249501 1989 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
NIPAL4Q0D2K0 CDC42BPB-201ENST00000361246 6758 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
NIPAL4Q0D2K0 UVSSA-207ENST00000511216 2927 ntAPPRIS P2 TSL 1 (best) BASIC19.38■□□□□ 0.69
NIPAL4Q0D2K0 SKOR2-202ENST00000425639 3899 ntAPPRIS ALT2 TSL 5 BASIC19.38■□□□□ 0.69
NIPAL4Q0D2K0 AGAP4-201ENST00000311652 2715 ntAPPRIS ALT2 TSL 1 (best) BASIC19.38■□□□□ 0.69
NIPAL4Q0D2K0 PLAUR-203ENST00000340093 1548 ntAPPRIS P3 TSL 1 (best) BASIC19.38■□□□□ 0.69
NIPAL4Q0D2K0 TLK2-202ENST00000343388 3227 ntAPPRIS ALT1 TSL 1 (best) BASIC19.38■□□□□ 0.69
NIPAL4Q0D2K0 CITED2-201ENST00000367651 2354 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
NIPAL4Q0D2K0 RAP1B-203ENST00000378985 1017 ntTSL 2 BASIC19.38■□□□□ 0.69
NIPAL4Q0D2K0 HOXA9-202ENST00000396345 797 ntTSL 2 BASIC19.38■□□□□ 0.69
NIPAL4Q0D2K0 RAMP1-204ENST00000409726 734 ntTSL 3 BASIC19.38■□□□□ 0.69
NIPAL4Q0D2K0 GAS2L1P1-201ENST00000420145 1480 ntBASIC19.38■□□□□ 0.69
NIPAL4Q0D2K0 LRRC23-207ENST00000433346 1387 ntTSL 5 BASIC19.38■□□□□ 0.69
NIPAL4Q0D2K0 TSPY21P-201ENST00000433481 731 ntBASIC19.38■□□□□ 0.69
NIPAL4Q0D2K0 WDR86-AS1-203ENST00000480632 704 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
NIPAL4Q0D2K0 AC116562.2-201ENST00000507042 360 ntBASIC19.38■□□□□ 0.69
NIPAL4Q0D2K0 RAP1B-221ENST00000540209 1264 ntTSL 2 BASIC19.38■□□□□ 0.69
NIPAL4Q0D2K0 ADGRD1-AS1-202ENST00000542980 1277 ntTSL 4 BASIC19.38■□□□□ 0.69
NIPAL4Q0D2K0 ZFC3H1-206ENST00000548100 1771 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
NIPAL4Q0D2K0 FAM98C-205ENST00000588262 826 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
NIPAL4Q0D2K0 PRKACA-209ENST00000590853 1101 ntTSL 5 BASIC19.38■□□□□ 0.69
NIPAL4Q0D2K0 RAB11FIP5-201ENST00000258098 4342 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
NIPAL4Q0D2K0 TMEM129-202ENST00000382936 2810 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
NIPAL4Q0D2K0 TMEM250-201ENST00000418388 2823 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
NIPAL4Q0D2K0 COX20-203ENST00000411948 2631 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
NIPAL4Q0D2K0 LARGE2-206ENST00000529052 2459 ntAPPRIS ALT2 TSL 2 BASIC19.37■□□□□ 0.69
NIPAL4Q0D2K0 PPP1R3F-202ENST00000376188 2443 ntTSL 2 BASIC19.37■□□□□ 0.69
NIPAL4Q0D2K0 KRT8-217ENST00000619952 2437 ntTSL 2 BASIC19.37■□□□□ 0.69
NIPAL4Q0D2K0 TMEM155-201ENST00000337677 2313 ntAPPRIS P2 TSL 1 (best) BASIC19.37■□□□□ 0.69
NIPAL4Q0D2K0 ATP11C-203ENST00000370557 6924 ntAPPRIS ALT2 TSL 5 BASIC19.37■□□□□ 0.69
NIPAL4Q0D2K0 OGFOD2-207ENST00000536150 1956 ntTSL 2 BASIC19.37■□□□□ 0.69
NIPAL4Q0D2K0 FP475955.4-201ENST00000623131 1990 ntBASIC19.37■□□□□ 0.69
NIPAL4Q0D2K0 WNK1-203ENST00000447667 1902 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
NIPAL4Q0D2K0 SUMF2-202ENST00000342190 1876 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
NIPAL4Q0D2K0 ST6GALNAC4-201ENST00000335791 1691 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
NIPAL4Q0D2K0 NFE2-204ENST00000553070 1523 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
NIPAL4Q0D2K0 BLOC1S3-201ENST00000433642 2601 ntAPPRIS P1 TSL 2 BASIC19.37■□□□□ 0.69
NIPAL4Q0D2K0 NTAN1-201ENST00000287706 1204 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
NIPAL4Q0D2K0 RHOC-203ENST00000369632 1026 ntAPPRIS P1 TSL 3 BASIC19.37■□□□□ 0.69
NIPAL4Q0D2K0 AC004080.6-201ENST00000467897 919 ntTSL 5 BASIC19.37■□□□□ 0.69
NIPAL4Q0D2K0 STAC3-202ENST00000546246 1014 ntTSL 2 BASIC19.37■□□□□ 0.69
NIPAL4Q0D2K0 TMEM235-204ENST00000551068 1187 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
NIPAL4Q0D2K0 AC026471.5-201ENST00000615068 467 ntBASIC19.37■□□□□ 0.69
NIPAL4Q0D2K0 FIP1L1-202ENST00000337488 2198 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
NIPAL4Q0D2K0 FIP1L1-203ENST00000358575 2180 ntAPPRIS P4 TSL 2 BASIC19.37■□□□□ 0.69
NIPAL4Q0D2K0 TMEM8B-204ENST00000439587 2150 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
NIPAL4Q0D2K0 LRCH3-207ENST00000441090 2034 ntTSL 2 BASIC19.37■□□□□ 0.69
NIPAL4Q0D2K0 UBQLN4P1-201ENST00000461599 1801 ntBASIC19.37■□□□□ 0.69
NIPAL4Q0D2K0 RNF114-201ENST00000244061 2503 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
NIPAL4Q0D2K0 SLC25A39-202ENST00000377095 1565 ntAPPRIS ALT1 TSL 1 (best) BASIC19.36■□□□□ 0.69
NIPAL4Q0D2K0 UBE2E3-209ENST00000602710 1556 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
NIPAL4Q0D2K0 BPIFB3-201ENST00000375494 1454 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
NIPAL4Q0D2K0 ULK3-217ENST00000568667 1470 ntTSL 5 BASIC19.36■□□□□ 0.69
NIPAL4Q0D2K0 PIGH-201ENST00000216452 1420 ntAPPRIS P2 TSL 1 (best) BASIC19.36■□□□□ 0.69
NIPAL4Q0D2K0 GRAMD2B-219ENST00000544396 2822 ntTSL 2 BASIC19.36■□□□□ 0.69
NIPAL4Q0D2K0 SMN1-209ENST00000514951 1308 ntTSL 2 BASIC19.36■□□□□ 0.69
NIPAL4Q0D2K0 PLIN2-201ENST00000276914 1972 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
NIPAL4Q0D2K0 IL10RB-201ENST00000290200 1963 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
NIPAL4Q0D2K0 CHRNA10-201ENST00000250699 1945 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
NIPAL4Q0D2K0 SRSF2-202ENST00000359995 1927 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
NIPAL4Q0D2K0 CTBP2-214ENST00000531469 1918 ntAPPRIS P1 TSL 2 BASIC19.36■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 34.6 ms