Protein–RNA interactions for Protein: P78426

NKX6-1, Homeobox protein Nkx-6.1, humanhuman

Predicted RBP Predictions only

Length 367 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX6-1P78426 ATP10A-201ENST00000356865 6680 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
NKX6-1P78426 ACAP3-201ENST00000353662 2280 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
NKX6-1P78426 HS2ST1-202ENST00000370551 1585 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
NKX6-1P78426 AMACR-206ENST00000502637 1598 ntTSL 5 BASIC16.76■□□□□ 0.27
NKX6-1P78426 KRT16P3-203ENST00000580621 1939 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
NKX6-1P78426 AC016065.1-201ENST00000500118 2413 ntTSL 2 BASIC16.76■□□□□ 0.27
NKX6-1P78426 NR6A1-202ENST00000373584 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
NKX6-1P78426 PCGF3-208ENST00000470161 1652 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
NKX6-1P78426 STRBP-201ENST00000348403 3337 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
NKX6-1P78426 SMPD1-201ENST00000342245 2452 ntAPPRIS ALT1 TSL 1 (best) BASIC16.75■□□□□ 0.27
NKX6-1P78426 OGG1-217ENST00000449570 1948 ntTSL 5 BASIC16.75■□□□□ 0.27
NKX6-1P78426 EMC6-201ENST00000248378 653 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
NKX6-1P78426 DNAJC4-201ENST00000321460 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
NKX6-1P78426 ST8SIA1-202ENST00000381424 1036 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
NKX6-1P78426 PHYHD1-207ENST00000421063 1182 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
NKX6-1P78426 TSPY1-201ENST00000423647 1171 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
NKX6-1P78426 ISOC2-202ENST00000425675 998 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
NKX6-1P78426 PPP1R14BP5-201ENST00000440334 435 ntBASIC16.75■□□□□ 0.27
NKX6-1P78426 ECEL1P2-202ENST00000465689 757 ntBASIC16.75■□□□□ 0.27
NKX6-1P78426 AC128688.1-201ENST00000487626 519 ntBASIC16.75■□□□□ 0.27
NKX6-1P78426 EGLN1P1-201ENST00000531623 762 ntBASIC16.75■□□□□ 0.27
NKX6-1P78426 AKTIP-212ENST00000570004 1162 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
NKX6-1P78426 CIRBP-217ENST00000588230 1013 ntTSL 5 BASIC16.75■□□□□ 0.27
NKX6-1P78426 AC091076.1-201ENST00000610741 619 ntBASIC16.75■□□□□ 0.27
NKX6-1P78426 NHLRC1-201ENST00000340650 2248 ntAPPRIS P1 BASIC16.75■□□□□ 0.27
NKX6-1P78426 WNT7B-204ENST00000410089 2202 ntTSL 5 BASIC16.75■□□□□ 0.27
NKX6-1P78426 IRX4-208ENST00000622814 2398 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
NKX6-1P78426 NPIPA8-201ENST00000525596 1565 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
NKX6-1P78426 ITGB5-201ENST00000296181 4372 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
NKX6-1P78426 DCHS2-201ENST00000339452 5064 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
NKX6-1P78426 TRIM74-201ENST00000285805 1350 ntAPPRIS P2 TSL 1 (best) BASIC16.75■□□□□ 0.27
NKX6-1P78426 TRIM73-201ENST00000323819 1358 ntAPPRIS P2 TSL 1 (best) BASIC16.75■□□□□ 0.27
NKX6-1P78426 HOXD11-201ENST00000249504 1533 ntAPPRIS P1 TSL 3 BASIC16.75■□□□□ 0.27
NKX6-1P78426 ZNF326-202ENST00000361911 1538 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
NKX6-1P78426 AP001922.1-201ENST00000499390 1504 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
NKX6-1P78426 FAM110A-204ENST00000381941 1809 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
NKX6-1P78426 IRF7-201ENST00000330243 1992 ntAPPRIS P4 TSL 5 BASIC16.75■□□□□ 0.27
NKX6-1P78426 DAG1-219ENST00000538711 5582 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
NKX6-1P78426 SORCS3-202ENST00000369701 5757 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
NKX6-1P78426 HMOX2-218ENST00000619913 1908 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
NKX6-1P78426 BICRA-201ENST00000396720 5739 ntAPPRIS P2 TSL 5 BASIC16.74■□□□□ 0.27
NKX6-1P78426 UBN1-201ENST00000262376 6252 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
NKX6-1P78426 SPOCK3-204ENST00000502330 2180 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
NKX6-1P78426 UBE2QL1-201ENST00000399816 4317 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
NKX6-1P78426 FGF17-201ENST00000359441 1714 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
NKX6-1P78426 POLD2-201ENST00000223361 1597 ntTSL 5 BASIC16.74■□□□□ 0.27
NKX6-1P78426 ACOT2-204ENST00000613168 1553 ntAPPRIS P5 TSL 1 (best) BASIC16.74■□□□□ 0.27
NKX6-1P78426 SLC25A48-202ENST00000412661 1148 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
NKX6-1P78426 AK4P3-201ENST00000418260 669 ntBASIC16.74■□□□□ 0.27
NKX6-1P78426 SLC25A48-204ENST00000433282 1111 ntAPPRIS P1 TSL 5 BASIC16.74■□□□□ 0.27
NKX6-1P78426 AL136307.1-201ENST00000454882 411 ntTSL 2 BASIC16.74■□□□□ 0.27
NKX6-1P78426 LRRC75A-AS1-205ENST00000475953 1201 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
NKX6-1P78426 ABHD14B-208ENST00000525795 980 ntAPPRIS P1 TSL 3 BASIC16.74■□□□□ 0.27
NKX6-1P78426 AC026271.3-201ENST00000571884 352 ntBASIC16.74■□□□□ 0.27
NKX6-1P78426 ZNF599-203ENST00000588760 948 ntTSL 2 BASIC16.74■□□□□ 0.27
NKX6-1P78426 UAP1-201ENST00000271469 2377 ntAPPRIS ALT1 TSL 5 BASIC16.74■□□□□ 0.27
NKX6-1P78426 TMPO-204ENST00000393053 2374 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
NKX6-1P78426 CBLN2-201ENST00000269503 2945 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
NKX6-1P78426 CLIP2-202ENST00000361545 5445 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
NKX6-1P78426 TH-206ENST00000381178 1910 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
NKX6-1P78426 BYSL-201ENST00000230340 2029 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
NKX6-1P78426 RUVBL2-206ENST00000595090 2009 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
NKX6-1P78426 DBN1-210ENST00000512501 1878 ntTSL 3 BASIC16.73■□□□□ 0.27
NKX6-1P78426 SPG7-202ENST00000341316 2288 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
NKX6-1P78426 SIMC1-203ENST00000429602 2694 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
NKX6-1P78426 MAPK8IP1-201ENST00000241014 3050 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
NKX6-1P78426 FOXD2-201ENST00000334793 4675 ntAPPRIS P1 BASIC16.73■□□□□ 0.27
NKX6-1P78426 DNAJC1-202ENST00000376980 2106 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
NKX6-1P78426 NAT6-201ENST00000354862 1330 ntAPPRIS P3 TSL 1 (best) BASIC16.73■□□□□ 0.27
NKX6-1P78426 POC1A-202ENST00000394970 1999 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
NKX6-1P78426 HCN4-201ENST00000261917 7228 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
NKX6-1P78426 ACAA1-209ENST00000450296 1570 ntTSL 5 BASIC16.73■□□□□ 0.27
NKX6-1P78426 ATP2A2-201ENST00000308664 4453 ntAPPRIS ALT1 TSL 1 (best) BASIC16.73■□□□□ 0.27
NKX6-1P78426 IZUMO2-201ENST00000293405 728 ntAPPRIS P2 TSL 1 (best) BASIC16.73■□□□□ 0.27
NKX6-1P78426 GLI4-202ENST00000344692 1012 ntTSL 2 BASIC16.73■□□□□ 0.27
NKX6-1P78426 UBE2C-206ENST00000405520 641 ntTSL 2 BASIC16.73■□□□□ 0.27
NKX6-1P78426 AL050404.1-201ENST00000424566 802 ntTSL 2 BASIC16.73■□□□□ 0.27
NKX6-1P78426 AC004980.1-204ENST00000429707 299 ntBASIC16.73■□□□□ 0.27
NKX6-1P78426 LMCD1-AS1-204ENST00000446281 932 ntTSL 5 BASIC16.73■□□□□ 0.27
NKX6-1P78426 ASPHD1-203ENST00000483405 1115 ntAPPRIS ALT2 TSL 3 BASIC16.73■□□□□ 0.27
NKX6-1P78426 GCHFR-205ENST00000559932 695 ntTSL 2 BASIC16.73■□□□□ 0.27
NKX6-1P78426 CENPX-206ENST00000580435 710 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
NKX6-1P78426 PSMD8-202ENST00000585598 541 ntTSL 5 BASIC16.73■□□□□ 0.27
NKX6-1P78426 UBE2C-208ENST00000617055 705 ntTSL 3 BASIC16.73■□□□□ 0.27
NKX6-1P78426 KCNQ2-213ENST00000626839 9213 ntAPPRIS ALT1 TSL 1 (best) BASIC16.73■□□□□ 0.27
NKX6-1P78426 AC026471.1-201ENST00000564629 3026 ntBASIC16.73■□□□□ 0.27
NKX6-1P78426 ZGPAT-203ENST00000357119 1896 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
NKX6-1P78426 PRDM1-202ENST00000369091 2612 ntTSL 1 (best) BASIC16.73■□□□□ 0.27
NKX6-1P78426 GTF3A-201ENST00000381140 1383 ntAPPRIS ALT2 TSL 1 (best) BASIC16.73■□□□□ 0.27
NKX6-1P78426 AL445183.2-201ENST00000439621 1871 ntTSL 2 BASIC16.73■□□□□ 0.27
NKX6-1P78426 ANKRD13D-216ENST00000514166 2138 ntTSL 2 BASIC16.73■□□□□ 0.27
NKX6-1P78426 ADCY6-206ENST00000550422 5877 ntTSL 2 BASIC16.73■□□□□ 0.27
NKX6-1P78426 LGALS9C-209ENST00000581545 1378 ntTSL 5 BASIC16.73■□□□□ 0.27
NKX6-1P78426 LINC00304-201ENST00000321214 2243 ntTSL 2 BASIC16.73■□□□□ 0.27
NKX6-1P78426 KCNK4-207ENST00000539216 1723 ntAPPRIS P1 TSL 1 (best) BASIC16.73■□□□□ 0.27
NKX6-1P78426 PDLIM2-205ENST00000397761 1491 ntAPPRIS P1 TSL 5 BASIC16.73■□□□□ 0.27
NKX6-1P78426 CFAP46-201ENST00000368585 1825 ntAPPRIS ALT2 TSL 2 BASIC16.73■□□□□ 0.27
NKX6-1P78426 ZNF346-209ENST00000512315 1575 ntTSL 2 BASIC16.72■□□□□ 0.27
NKX6-1P78426 HEG1-201ENST00000311127 9156 ntAPPRIS P1 TSL 5 BASIC16.72■□□□□ 0.27
NKX6-1P78426 ARFIP2-204ENST00000445086 1300 ntTSL 2 BASIC16.72■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 39.9 ms