Protein–RNA interactions for Protein: P78423

CX3CL1, Fractalkine, humanhuman

Predictions only

Length 397 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CX3CL1P78423 ST3GAL3-201ENST00000262915 2470 ntTSL 5 BASIC15.34■□□□□ 0.05
CX3CL1P78423 SIVA1-201ENST00000329967 802 ntAPPRIS P2 TSL 1 (best) BASIC15.34■□□□□ 0.05
CX3CL1P78423 PEX7-202ENST00000367756 680 ntTSL 3 BASIC15.34■□□□□ 0.05
CX3CL1P78423 PMF1-BGLAP-202ENST00000368276 852 ntTSL 3 BASIC15.34■□□□□ 0.05
CX3CL1P78423 METTL5-206ENST00000409965 880 ntAPPRIS P2 TSL 1 (best) BASIC15.34■□□□□ 0.05
CX3CL1P78423 STK24-AS1-201ENST00000434547 1278 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
CX3CL1P78423 GCSHP5-201ENST00000443090 522 ntBASIC15.34■□□□□ 0.05
CX3CL1P78423 SMG1P1-207ENST00000446662 852 ntTSL 5 BASIC15.34■□□□□ 0.05
CX3CL1P78423 NDUFA13-203ENST00000503283 825 ntTSL 2 BASIC15.34■□□□□ 0.05
CX3CL1P78423 AC100835.1-201ENST00000565737 498 ntTSL 5 BASIC15.34■□□□□ 0.05
CX3CL1P78423 AC010336.4-201ENST00000595655 438 ntTSL 5 BASIC15.34■□□□□ 0.05
CX3CL1P78423 AC020922.2-201ENST00000596786 359 ntTSL 4 BASIC15.34■□□□□ 0.05
CX3CL1P78423 TMEM191A-211ENST00000637163 1067 ntBASIC15.34■□□□□ 0.05
CX3CL1P78423 SYTL1-201ENST00000318074 1900 ntTSL 2 BASIC15.34■□□□□ 0.05
CX3CL1P78423 KCTD15-202ENST00000430256 2555 ntAPPRIS P1 TSL 2 BASIC15.34■□□□□ 0.05
CX3CL1P78423 DMRT2-204ENST00000382251 2292 ntAPPRIS P1 TSL 5 BASIC15.34■□□□□ 0.05
CX3CL1P78423 HTR7P1-201ENST00000538670 1336 ntBASIC15.34■□□□□ 0.05
CX3CL1P78423 ROPN1-209ENST00000495093 1376 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
CX3CL1P78423 CBX1-202ENST00000393408 2422 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
CX3CL1P78423 STARD3-201ENST00000336308 2132 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
CX3CL1P78423 CEP78-201ENST00000277082 2542 ntAPPRIS ALT2 TSL 2 BASIC15.34■□□□□ 0.05
CX3CL1P78423 REEP2-202ENST00000378339 2170 ntAPPRIS ALT1 TSL 1 (best) BASIC15.34■□□□□ 0.05
CX3CL1P78423 FHL1-219ENST00000618438 2178 ntTSL 3 BASIC15.34■□□□□ 0.05
CX3CL1P78423 PLPBP-201ENST00000328195 2558 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
CX3CL1P78423 BMP8B-201ENST00000372827 4822 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
CX3CL1P78423 POMT2-201ENST00000261534 4876 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
CX3CL1P78423 GRB10-205ENST00000401949 2627 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
CX3CL1P78423 MAPT-209ENST00000446361 5345 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.05
CX3CL1P78423 RAPH1-211ENST00000457812 2673 ntAPPRIS ALT2 TSL 2 BASIC15.33■□□□□ 0.05
CX3CL1P78423 SLC35B2-205ENST00000538577 1909 ntTSL 2 BASIC15.33■□□□□ 0.05
CX3CL1P78423 AC120498.9-201ENST00000339021 3867 ntBASIC15.33■□□□□ 0.05
CX3CL1P78423 NPIPA8-201ENST00000525596 1565 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.05
CX3CL1P78423 TMEM70-201ENST00000312184 2018 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
CX3CL1P78423 PLD4-204ENST00000540372 2007 ntAPPRIS ALT2 TSL 2 BASIC15.33■□□□□ 0.04
CX3CL1P78423 CSPG5-202ENST00000383738 4161 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
CX3CL1P78423 AC126773.2-201ENST00000562172 1682 ntTSL 3 BASIC15.33■□□□□ 0.04
CX3CL1P78423 MRPL15-201ENST00000260102 1147 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
CX3CL1P78423 FMR1-202ENST00000334557 1295 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
CX3CL1P78423 HP1BP3-202ENST00000375000 928 ntTSL 1 (best) BASIC15.33■□□□□ 0.04
CX3CL1P78423 SEC61A2-206ENST00000379051 707 ntTSL 3 BASIC15.33■□□□□ 0.04
CX3CL1P78423 ANKRD54-204ENST00000411961 946 ntTSL 5 BASIC15.33■□□□□ 0.04
CX3CL1P78423 TNFRSF18-204ENST00000486728 727 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
CX3CL1P78423 SFXN1-203ENST00000502393 637 ntTSL 2 BASIC15.33■□□□□ 0.04
CX3CL1P78423 AC091564.5-201ENST00000526456 820 ntTSL 4 BASIC15.33■□□□□ 0.04
CX3CL1P78423 UBE2Q2-208ENST00000569423 2969 ntTSL 2 BASIC15.33■□□□□ 0.04
CX3CL1P78423 AC011446.2-202ENST00000592882 756 ntTSL 3 BASIC15.33■□□□□ 0.04
CX3CL1P78423 BX649632.1-201ENST00000610187 819 ntTSL 3 BASIC15.33■□□□□ 0.04
CX3CL1P78423 FCMR-210ENST00000628511 1055 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
CX3CL1P78423 HLA-A-209ENST00000638375 975 ntBASIC15.33■□□□□ 0.04
CX3CL1P78423 WDTC1-201ENST00000319394 4819 ntAPPRIS ALT1 TSL 1 (best) BASIC15.33■□□□□ 0.04
CX3CL1P78423 DPYSL3-202ENST00000398514 5309 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
CX3CL1P78423 IFFO1-212ENST00000619571 2724 ntTSL 2 BASIC15.33■□□□□ 0.04
CX3CL1P78423 ADCY9-201ENST00000294016 7725 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
CX3CL1P78423 MZT1-201ENST00000377818 2299 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
CX3CL1P78423 LGALS9C-209ENST00000581545 1378 ntTSL 5 BASIC15.33■□□□□ 0.04
CX3CL1P78423 SPATA20-226ENST00000619622 2769 ntAPPRIS P2 TSL 5 BASIC15.33■□□□□ 0.04
CX3CL1P78423 AZIN1-201ENST00000337198 4721 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
CX3CL1P78423 TM9SF1-203ENST00000524835 1938 ntTSL 2 BASIC15.33■□□□□ 0.04
CX3CL1P78423 KIAA1549-201ENST00000422774 6283 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.04
CX3CL1P78423 GPR146-201ENST00000397095 1969 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
CX3CL1P78423 ANKIB1-201ENST00000265742 6081 ntAPPRIS P1 TSL 1 (best) BASIC15.33■□□□□ 0.04
CX3CL1P78423 LDHD-201ENST00000300051 2067 ntAPPRIS P3 TSL 1 (best) BASIC15.32■□□□□ 0.04
CX3CL1P78423 FARSA-207ENST00000588025 2057 ntTSL 5 BASIC15.32■□□□□ 0.04
CX3CL1P78423 AC008691.1-203ENST00000515337 1580 ntTSL 2 BASIC15.32■□□□□ 0.04
CX3CL1P78423 AKT1-211ENST00000554848 1595 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
CX3CL1P78423 LRPPRC-202ENST00000409659 1610 ntTSL 5 BASIC15.32■□□□□ 0.04
CX3CL1P78423 USP21-201ENST00000289865 2195 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
CX3CL1P78423 SENP6-201ENST00000327284 2700 ntTSL 2 BASIC15.32■□□□□ 0.04
CX3CL1P78423 SNN-201ENST00000329565 3312 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
CX3CL1P78423 MELTF-202ENST00000296351 1650 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
CX3CL1P78423 MCIDAS-201ENST00000513312 1736 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
CX3CL1P78423 DSCC1-201ENST00000313655 2314 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
CX3CL1P78423 GAS2L1-208ENST00000616432 2925 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
CX3CL1P78423 MCCC1-214ENST00000610757 2410 ntTSL 5 BASIC15.32■□□□□ 0.04
CX3CL1P78423 IP6K1-204ENST00000468463 1815 ntTSL 5 BASIC15.32■□□□□ 0.04
CX3CL1P78423 MIB2-231ENST00000518681 3116 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
CX3CL1P78423 PDCD2-202ENST00000392090 936 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
CX3CL1P78423 AP002982.1-201ENST00000492365 877 ntBASIC15.32■□□□□ 0.04
CX3CL1P78423 LINC00636-201ENST00000494231 1264 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
CX3CL1P78423 HGNC:18790-208ENST00000506380 798 ntAPPRIS P1 TSL 3 BASIC15.32■□□□□ 0.04
CX3CL1P78423 ATP6V0E1-204ENST00000519911 718 ntTSL 2 BASIC15.32■□□□□ 0.04
CX3CL1P78423 CERNA3-201ENST00000521403 557 ntTSL 3 BASIC15.32■□□□□ 0.04
CX3CL1P78423 GRAMD1B-209ENST00000533341 707 ntTSL 2 BASIC15.32■□□□□ 0.04
CX3CL1P78423 NDUFS3-212ENST00000534208 583 ntTSL 4 BASIC15.32■□□□□ 0.04
CX3CL1P78423 CHEK2P2-202ENST00000555186 864 ntTSL 2 BASIC15.32■□□□□ 0.04
CX3CL1P78423 C17orf62-238ENST00000585064 1074 ntAPPRIS P1 TSL 2 BASIC15.32■□□□□ 0.04
CX3CL1P78423 BIRC2-206ENST00000530675 1927 ntTSL 2 BASIC15.32■□□□□ 0.04
CX3CL1P78423 FOXP4-202ENST00000373057 3300 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
CX3CL1P78423 SLC35E4-201ENST00000343605 2714 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
CX3CL1P78423 ALDOA-212ENST00000564546 2104 ntAPPRIS P2 TSL 1 (best) BASIC15.32■□□□□ 0.04
CX3CL1P78423 C6orf89-203ENST00000373685 1400 ntAPPRIS ALT2 TSL 5 BASIC15.32■□□□□ 0.04
CX3CL1P78423 OGG1-203ENST00000302036 2220 ntTSL 1 (best) BASIC15.32■□□□□ 0.04
CX3CL1P78423 UBE2E1-201ENST00000306627 1511 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
CX3CL1P78423 TMEM175-220ENST00000515740 1514 ntTSL 3 BASIC15.32■□□□□ 0.04
CX3CL1P78423 FBLN7-202ENST00000331203 2301 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
CX3CL1P78423 PEX16-210ENST00000532681 1639 ntTSL 3 BASIC15.32■□□□□ 0.04
CX3CL1P78423 GDF10-201ENST00000580279 2458 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
CX3CL1P78423 PTH2R-204ENST00000617735 2472 ntTSL 2 BASIC15.32■□□□□ 0.04
CX3CL1P78423 SLC35E1-208ENST00000595753 5099 ntAPPRIS P1 TSL 1 (best) BASIC15.32■□□□□ 0.04
CX3CL1P78423 B3GALNT2-201ENST00000313984 1874 ntTSL 1 (best) BASIC15.31■□□□□ 0.04
Retrieved 100 of 98,524 protein–RNA pairs in 39.3 ms