Protein–RNA interactions for Protein: P78357

CNTNAP1, Contactin-associated protein 1, humanhuman

Predictions only

Length 1,384 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP1P78357 RAMP1-201ENST00000254661 910 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
CNTNAP1P78357 RPL36-201ENST00000347512 707 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
CNTNAP1P78357 GRM5-203ENST00000393294 1268 ntTSL 1 (best) BASIC22.68■■□□□ 1.22
CNTNAP1P78357 RPS14-203ENST00000407193 784 ntAPPRIS P1 TSL 2 BASIC22.68■■□□□ 1.22
CNTNAP1P78357 CHMP3-203ENST00000409225 1099 ntTSL 2 BASIC22.68■■□□□ 1.22
CNTNAP1P78357 DRAXINP1-201ENST00000437611 948 ntBASIC22.68■■□□□ 1.22
CNTNAP1P78357 RPL29-202ENST00000466397 742 ntAPPRIS P1 TSL 2 BASIC22.68■■□□□ 1.22
CNTNAP1P78357 AC012615.1-201ENST00000565797 1299 ntBASIC22.68■■□□□ 1.22
CNTNAP1P78357 AC104758.1-202ENST00000568184 602 ntTSL 3 BASIC22.68■■□□□ 1.22
CNTNAP1P78357 CASKIN2-205ENST00000581870 1612 ntTSL 2 BASIC22.68■■□□□ 1.22
CNTNAP1P78357 MAGED2-203ENST00000375053 2066 ntAPPRIS P2 TSL 1 (best) BASIC22.68■■□□□ 1.22
CNTNAP1P78357 IRF7-202ENST00000348655 1801 ntAPPRIS ALT2 TSL 1 (best) BASIC22.67■■□□□ 1.22
CNTNAP1P78357 SETD3-201ENST00000329331 1330 ntTSL 1 (best) BASIC22.67■■□□□ 1.22
CNTNAP1P78357 HDDC3-201ENST00000330334 1047 ntTSL 1 (best) BASIC22.67■■□□□ 1.22
CNTNAP1P78357 FBLN5-202ENST00000342058 2123 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
CNTNAP1P78357 ITM2C-204ENST00000409704 1106 ntTSL 5 BASIC22.67■■□□□ 1.22
CNTNAP1P78357 EEF1E1-202ENST00000429723 562 ntTSL 3 BASIC22.67■■□□□ 1.22
CNTNAP1P78357 AC116353.4-201ENST00000507279 576 ntTSL 4 BASIC22.67■■□□□ 1.22
CNTNAP1P78357 BORCS8-206ENST00000585679 801 ntTSL 3 BASIC22.67■■□□□ 1.22
CNTNAP1P78357 AC107896.1-201ENST00000593212 548 ntTSL 4 BASIC22.67■■□□□ 1.22
CNTNAP1P78357 BABAM1-206ENST00000595632 966 ntAPPRIS ALT2 TSL 5 BASIC22.67■■□□□ 1.22
CNTNAP1P78357 ACBD4-215ENST00000592162 1684 ntTSL 5 BASIC22.67■■□□□ 1.22
CNTNAP1P78357 KCNMA1-283ENST00000640523 5425 ntAPPRIS ALT2 TSL 5 BASIC22.67■■□□□ 1.22
CNTNAP1P78357 POU4F1-201ENST00000377208 4547 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
CNTNAP1P78357 ICA1-208ENST00000407906 1615 ntTSL 1 (best) BASIC22.67■■□□□ 1.22
CNTNAP1P78357 SSH1-209ENST00000551165 2354 ntAPPRIS ALT2 TSL 1 (best) BASIC22.67■■□□□ 1.22
CNTNAP1P78357 SLC16A5-201ENST00000329783 1934 ntAPPRIS P2 TSL 1 (best) BASIC22.67■■□□□ 1.22
CNTNAP1P78357 RABEPK-202ENST00000373538 1504 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
CNTNAP1P78357 CXorf40A-208ENST00000434353 1524 ntAPPRIS ALT1 TSL 5 BASIC22.67■■□□□ 1.22
CNTNAP1P78357 SPATA6L-207ENST00000475086 1444 ntAPPRIS P1 TSL 2 BASIC22.67■■□□□ 1.22
CNTNAP1P78357 APLP1-203ENST00000586861 2052 ntTSL 2 BASIC22.67■■□□□ 1.22
CNTNAP1P78357 AC007249.2-201ENST00000553181 1737 ntTSL 5 BASIC22.67■■□□□ 1.22
CNTNAP1P78357 UBE2F-201ENST00000272930 2009 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
CNTNAP1P78357 BEST4-201ENST00000372207 2047 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
CNTNAP1P78357 FBXW8-201ENST00000309909 2343 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
CNTNAP1P78357 IDH1-205ENST00000446179 2298 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
CNTNAP1P78357 GPSM1-206ENST00000616132 2270 ntTSL 1 (best) BASIC22.66■■□□□ 1.22
CNTNAP1P78357 AC092667.1-201ENST00000434301 2586 ntBASIC22.66■■□□□ 1.22
CNTNAP1P78357 TMEM190-201ENST00000291934 593 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
CNTNAP1P78357 SDCBP2-203ENST00000381808 1261 ntTSL 1 (best) BASIC22.66■■□□□ 1.22
CNTNAP1P78357 UFSP1-201ENST00000388761 996 ntAPPRIS P1 BASIC22.66■■□□□ 1.22
CNTNAP1P78357 BX842568.4-201ENST00000421222 227 ntBASIC22.66■■□□□ 1.22
CNTNAP1P78357 LINC00265-3P-201ENST00000447588 903 ntBASIC22.66■■□□□ 1.22
CNTNAP1P78357 AC080013.1-203ENST00000468242 720 ntTSL 5 BASIC22.66■■□□□ 1.22
CNTNAP1P78357 AC080013.1-201ENST00000495318 566 ntTSL 4 BASIC22.66■■□□□ 1.22
CNTNAP1P78357 C12orf76-202ENST00000546627 461 ntTSL 4 BASIC22.66■■□□□ 1.22
CNTNAP1P78357 CIB2-208ENST00000560618 804 ntTSL 2 BASIC22.66■■□□□ 1.22
CNTNAP1P78357 PHKG2-202ENST00000424889 1566 ntTSL 2 BASIC22.66■■□□□ 1.22
CNTNAP1P78357 AC008691.1-203ENST00000515337 1580 ntTSL 2 BASIC22.66■■□□□ 1.22
CNTNAP1P78357 TSR2-201ENST00000375151 1534 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
CNTNAP1P78357 EMX1-202ENST00000394111 1528 ntTSL 3 BASIC22.66■■□□□ 1.22
CNTNAP1P78357 SLC44A3-203ENST00000446120 2094 ntTSL 2 BASIC22.66■■□□□ 1.22
CNTNAP1P78357 FAM57B-204ENST00000564806 1710 ntTSL 2 BASIC22.66■■□□□ 1.22
CNTNAP1P78357 CABP4-202ENST00000438189 1426 ntTSL 1 (best) BASIC22.66■■□□□ 1.22
CNTNAP1P78357 PTPN11-202ENST00000392597 1876 ntTSL 1 (best) BASIC22.66■■□□□ 1.22
CNTNAP1P78357 ARHGAP8-202ENST00000356099 1584 ntAPPRIS P3 TSL 1 (best) BASIC22.65■■□□□ 1.22
CNTNAP1P78357 ZNF346-209ENST00000512315 1575 ntTSL 2 BASIC22.65■■□□□ 1.22
CNTNAP1P78357 AC093525.10-201ENST00000625130 1569 ntBASIC22.65■■□□□ 1.22
CNTNAP1P78357 BCL7A-201ENST00000261822 2581 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
CNTNAP1P78357 GGCT-205ENST00000409436 954 ntTSL 3 BASIC22.65■■□□□ 1.22
CNTNAP1P78357 AKR7L-201ENST00000420396 1240 ntAPPRIS ALT2 TSL 5 BASIC22.65■■□□□ 1.22
CNTNAP1P78357 LINC01063-201ENST00000441644 348 ntTSL 3 BASIC22.65■■□□□ 1.22
CNTNAP1P78357 AC113382.1-201ENST00000500267 1253 ntTSL 1 (best) BASIC22.65■■□□□ 1.22
CNTNAP1P78357 AC034232.1-201ENST00000506026 1064 ntBASIC22.65■■□□□ 1.22
CNTNAP1P78357 ZBED5-AS1-202ENST00000529014 771 ntTSL 5 BASIC22.65■■□□□ 1.22
CNTNAP1P78357 EFCAB11-211ENST00000556609 568 ntTSL 3 BASIC22.65■■□□□ 1.22
CNTNAP1P78357 KANSL1-AS1-203ENST00000572973 424 ntTSL 3 BASIC22.65■■□□□ 1.22
CNTNAP1P78357 GNAS-AS1-203ENST00000598163 548 ntTSL 4 BASIC22.65■■□□□ 1.22
CNTNAP1P78357 AC243773.1-201ENST00000614759 544 ntTSL 5 BASIC22.65■■□□□ 1.22
CNTNAP1P78357 PDZD3-201ENST00000322712 2204 ntTSL 1 (best) BASIC22.65■■□□□ 1.22
CNTNAP1P78357 TPST2-202ENST00000398110 1968 ntAPPRIS P1 TSL 2 BASIC22.65■■□□□ 1.22
CNTNAP1P78357 ZNF815P-204ENST00000434898 1737 ntBASIC22.65■■□□□ 1.22
CNTNAP1P78357 NR5A1-204ENST00000620110 2975 ntTSL 5 BASIC22.65■■□□□ 1.22
CNTNAP1P78357 C21orf91-203ENST00000400559 1593 ntAPPRIS ALT1 TSL 5 BASIC22.65■■□□□ 1.22
CNTNAP1P78357 UBE2E3-209ENST00000602710 1556 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
CNTNAP1P78357 NRXN1-205ENST00000401710 2873 ntTSL 5 BASIC22.65■■□□□ 1.22
CNTNAP1P78357 MYOG-201ENST00000241651 1528 ntAPPRIS P1 TSL 1 (best) BASIC22.65■■□□□ 1.22
CNTNAP1P78357 PER3-203ENST00000377541 1524 ntTSL 1 (best) BASIC22.65■■□□□ 1.22
CNTNAP1P78357 RNF32-207ENST00000405335 1938 ntAPPRIS P1 TSL 5 BASIC22.64■■□□□ 1.22
CNTNAP1P78357 ATP5J-201ENST00000284971 614 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.22
CNTNAP1P78357 CKLF-202ENST00000345436 571 ntAPPRIS ALT2 TSL 1 (best) BASIC22.64■■□□□ 1.22
CNTNAP1P78357 MRPL43-208ENST00000370242 884 ntTSL 2 BASIC22.64■■□□□ 1.22
CNTNAP1P78357 OLFM1-207ENST00000371801 568 ntTSL 2 BASIC22.64■■□□□ 1.22
CNTNAP1P78357 GAD2-202ENST00000376248 680 ntTSL 5 BASIC22.64■■□□□ 1.22
CNTNAP1P78357 SEC61G-203ENST00000415949 732 ntAPPRIS P1 TSL 5 BASIC22.64■■□□□ 1.22
CNTNAP1P78357 PPIE-208ENST00000470213 927 ntTSL 3 BASIC22.64■■□□□ 1.22
CNTNAP1P78357 SMN1-203ENST00000503079 1219 ntTSL 5 BASIC22.64■■□□□ 1.22
CNTNAP1P78357 RNA5SP419-201ENST00000515908 135 ntBASIC22.64■■□□□ 1.22
CNTNAP1P78357 ATP5G2-204ENST00000549164 745 ntAPPRIS P1 TSL 3 BASIC22.64■■□□□ 1.22
CNTNAP1P78357 ANAPC11-217ENST00000579978 575 ntAPPRIS P1 TSL 2 BASIC22.64■■□□□ 1.22
CNTNAP1P78357 TYROBP-209ENST00000589517 415 ntAPPRIS ALT1 TSL 1 (best) BASIC22.64■■□□□ 1.22
CNTNAP1P78357 ATP5G2-209ENST00000602871 668 ntAPPRIS P1 TSL 2 BASIC22.64■■□□□ 1.22
CNTNAP1P78357 WDR6-223ENST00000627177 207 ntTSL 2 BASIC22.64■■□□□ 1.22
CNTNAP1P78357 MXRA8-201ENST00000309212 2273 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.22
CNTNAP1P78357 ETV4-204ENST00000545089 1628 ntTSL 2 BASIC22.64■■□□□ 1.22
CNTNAP1P78357 CPNE7-202ENST00000319518 2409 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.22
CNTNAP1P78357 RBFOX1-215ENST00000553186 2196 ntTSL 1 (best) BASIC22.64■■□□□ 1.21
CNTNAP1P78357 CHMP4A-201ENST00000347519 1393 ntTSL 1 (best) BASIC22.64■■□□□ 1.21
CNTNAP1P78357 PTPRN2-204ENST00000404321 1374 ntTSL 5 BASIC22.64■■□□□ 1.21
CNTNAP1P78357 NUDT10-201ENST00000356450 1917 ntAPPRIS P1 TSL 1 (best) BASIC22.64■■□□□ 1.21
Retrieved 100 of 98,524 protein–RNA pairs in 23 ms