Protein–RNA interactions for Protein: P62987

UBA52, Ubiquitin-60S ribosomal protein L40, humanhuman

Known RBP Predictions only

Length 128 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBA52P62987 MMD2-201ENST00000401401 2335 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
UBA52P62987 GLIS1-202ENST00000628545 2807 ntAPPRIS ALT2 TSL 5 BASIC16.4■□□□□ 0.22
UBA52P62987 ISLR2-201ENST00000361742 4817 ntAPPRIS P1 TSL 1 (best) BASIC16.4■□□□□ 0.22
UBA52P62987 STAC-204ENST00000457375 1366 ntTSL 2 BASIC16.39■□□□□ 0.21
UBA52P62987 GPR31-201ENST00000366834 2059 ntAPPRIS P1 BASIC16.39■□□□□ 0.21
UBA52P62987 ADGRG2-208ENST00000379873 4698 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
UBA52P62987 RPS6KA1-203ENST00000374166 3131 ntTSL 5 BASIC16.39■□□□□ 0.21
UBA52P62987 LINC00605-201ENST00000514902 1558 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
UBA52P62987 AC104581.1-202ENST00000635932 2618 ntBASIC16.39■□□□□ 0.21
UBA52P62987 GPR3-201ENST00000374024 2115 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
UBA52P62987 AKNA-205ENST00000374079 2138 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
UBA52P62987 CDK13-201ENST00000181839 7298 ntAPPRIS P4 TSL 1 (best) BASIC16.39■□□□□ 0.21
UBA52P62987 MAP2K5-203ENST00000354498 1783 ntTSL 2 BASIC16.39■□□□□ 0.21
UBA52P62987 FAM66E-201ENST00000529252 1433 ntTSL 2 BASIC16.39■□□□□ 0.21
UBA52P62987 PADI2-201ENST00000375481 1607 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
UBA52P62987 GABRD-213ENST00000640067 1632 ntAPPRIS ALT2 TSL 5 BASIC16.39■□□□□ 0.21
UBA52P62987 WNT5B-201ENST00000310594 2184 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
UBA52P62987 MTDH-203ENST00000519934 2184 ntTSL 5 BASIC16.39■□□□□ 0.21
UBA52P62987 SPATA2L-202ENST00000335360 1001 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
UBA52P62987 AC211429.1-201ENST00000415277 523 ntBASIC16.39■□□□□ 0.21
UBA52P62987 AC012618.2-201ENST00000428058 849 ntBASIC16.39■□□□□ 0.21
UBA52P62987 GCFC2-207ENST00000470503 1066 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
UBA52P62987 AC092718.1-201ENST00000501068 1088 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
UBA52P62987 ISG20-210ENST00000560741 800 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
UBA52P62987 CMTM3-207ENST00000564060 824 ntTSL 2 BASIC16.39■□□□□ 0.21
UBA52P62987 C2orf69P4-201ENST00000565394 541 ntBASIC16.39■□□□□ 0.21
UBA52P62987 AC009090.2-201ENST00000565829 472 ntTSL 3 BASIC16.39■□□□□ 0.21
UBA52P62987 CMTM3-211ENST00000565922 615 ntTSL 1 (best) BASIC16.39■□□□□ 0.21
UBA52P62987 KLHL26-205ENST00000599006 989 ntTSL 5 BASIC16.39■□□□□ 0.21
UBA52P62987 PHOSPHO2-206ENST00000616481 1252 ntAPPRIS P1 TSL 3 BASIC16.39■□□□□ 0.21
UBA52P62987 PHOSPHO2-208ENST00000617738 1053 ntAPPRIS P1 TSL 2 BASIC16.39■□□□□ 0.21
UBA52P62987 DACT2-201ENST00000366795 2942 ntAPPRIS P3 TSL 2 BASIC16.39■□□□□ 0.21
UBA52P62987 EXOC3-AS1-202ENST00000623673 1663 ntBASIC16.39■□□□□ 0.21
UBA52P62987 RNF32-208ENST00000432459 1893 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
UBA52P62987 CPT2-207ENST00000636867 2643 ntTSL 5 BASIC16.39■□□□□ 0.21
UBA52P62987 GLIS1-201ENST00000312233 2812 ntAPPRIS P2 TSL 2 BASIC16.39■□□□□ 0.21
UBA52P62987 ZNF395-211ENST00000523202 2068 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
UBA52P62987 FBXL18-205ENST00000620087 2076 ntTSL 5 BASIC16.39■□□□□ 0.21
UBA52P62987 TAPT1-201ENST00000405303 4591 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
UBA52P62987 BIRC2-206ENST00000530675 1927 ntTSL 2 BASIC16.39■□□□□ 0.21
UBA52P62987 RIN1-205ENST00000530056 2122 ntTSL 2 BASIC16.39■□□□□ 0.21
UBA52P62987 ZNF346-201ENST00000358149 2314 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
UBA52P62987 RUBCNL-203ENST00000378787 2731 ntTSL 2 BASIC16.39■□□□□ 0.21
UBA52P62987 PPM1L-204ENST00000497343 1589 ntTSL 2 BASIC16.38■□□□□ 0.21
UBA52P62987 BCAT2-207ENST00000597011 1579 ntTSL 5 BASIC16.38■□□□□ 0.21
UBA52P62987 CXorf40A-204ENST00000423421 1403 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
UBA52P62987 KRT83-201ENST00000293670 1875 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
UBA52P62987 RDH13-203ENST00000415061 1871 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
UBA52P62987 C19orf54-203ENST00000470681 2521 ntTSL 2 BASIC16.38■□□□□ 0.21
UBA52P62987 CAMKMT-201ENST00000378494 1495 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
UBA52P62987 RALGPS1-206ENST00000394011 819 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
UBA52P62987 LINC00708-201ENST00000428165 916 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
UBA52P62987 FAM210CP-201ENST00000445714 574 ntBASIC16.38■□□□□ 0.21
UBA52P62987 PAIP2-208ENST00000511706 468 ntTSL 5 BASIC16.38■□□□□ 0.21
UBA52P62987 BCL2L10-202ENST00000561198 825 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
UBA52P62987 NUBP2-206ENST00000565134 815 ntTSL 5 BASIC16.38■□□□□ 0.21
UBA52P62987 C17orf62-230ENST00000583617 866 ntTSL 5 BASIC16.38■□□□□ 0.21
UBA52P62987 KLF2-202ENST00000592003 564 ntTSL 3 BASIC16.38■□□□□ 0.21
UBA52P62987 LINC01023-201ENST00000606054 436 ntBASIC16.38■□□□□ 0.21
UBA52P62987 MAPKAP1-205ENST00000373503 3045 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
UBA52P62987 PLCG1-202ENST00000373271 7395 ntAPPRIS ALT1 TSL 1 (best) BASIC16.38■□□□□ 0.21
UBA52P62987 UBE2K-203ENST00000445950 2175 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
UBA52P62987 TMEM109-202ENST00000536171 1959 ntAPPRIS P1 TSL 2 BASIC16.38■□□□□ 0.21
UBA52P62987 ZNF710-201ENST00000268154 4617 ntAPPRIS P1 TSL 2 BASIC16.38■□□□□ 0.21
UBA52P62987 EEF1D-225ENST00000529272 1311 ntAPPRIS ALT2 TSL 2 BASIC16.38■□□□□ 0.21
UBA52P62987 MAP6-201ENST00000304771 3334 ntAPPRIS P3 TSL 1 (best) BASIC16.38■□□□□ 0.21
UBA52P62987 EXTL3-213ENST00000523149 1779 ntTSL 5 BASIC16.38■□□□□ 0.21
UBA52P62987 AC116050.2-201ENST00000612102 1779 ntBASIC16.38■□□□□ 0.21
UBA52P62987 PRKCB-202ENST00000321728 2689 ntAPPRIS ALT1 TSL 1 (best) BASIC16.38■□□□□ 0.21
UBA52P62987 MTFR1L-203ENST00000374303 2004 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
UBA52P62987 UBE2O-201ENST00000319380 5436 ntAPPRIS P2 TSL 1 (best) BASIC16.38■□□□□ 0.21
UBA52P62987 HLX-201ENST00000366903 2280 ntAPPRIS P2 TSL 1 (best) BASIC16.38■□□□□ 0.21
UBA52P62987 PRR16-201ENST00000379551 1826 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
UBA52P62987 AUNIP-203ENST00000538789 1392 ntTSL 1 (best) BASIC16.38■□□□□ 0.21
UBA52P62987 ATP10A-201ENST00000356865 6680 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
UBA52P62987 FAM53A-207ENST00000489363 2776 ntTSL 2 BASIC16.38■□□□□ 0.21
UBA52P62987 CYP26A1-201ENST00000224356 2125 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
UBA52P62987 SGSM2-202ENST00000426855 4734 ntAPPRIS ALT1 TSL 1 (best) BASIC16.37■□□□□ 0.21
UBA52P62987 ADGRG2-209ENST00000379876 4779 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
UBA52P62987 FAM131A-202ENST00000340957 2421 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
UBA52P62987 RAB11FIP2-202ENST00000369199 6119 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
UBA52P62987 CD55-201ENST00000314754 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
UBA52P62987 ZNF74-201ENST00000357502 2788 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
UBA52P62987 AL691432.2-201ENST00000607222 2038 ntBASIC16.37■□□□□ 0.21
UBA52P62987 ABHD14A-201ENST00000273596 1062 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
UBA52P62987 PRSS57-201ENST00000329267 1025 ntAPPRIS ALT2 TSL 1 (best) BASIC16.37■□□□□ 0.21
UBA52P62987 FOXN3-AS1-201ENST00000555562 1077 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
UBA52P62987 AC090877.2-202ENST00000560363 574 ntTSL 2 BASIC16.37■□□□□ 0.21
UBA52P62987 HAGHL-213ENST00000564545 663 ntTSL 3 BASIC16.37■□□□□ 0.21
UBA52P62987 MAZ-215ENST00000569978 567 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
UBA52P62987 AC233702.5-201ENST00000584107 538 ntBASIC16.37■□□□□ 0.21
UBA52P62987 PRSS57-202ENST00000613411 1090 ntAPPRIS P3 TSL 1 (best) BASIC16.37■□□□□ 0.21
UBA52P62987 ZNF282-203ENST00000479907 1815 ntTSL 2 BASIC16.37■□□□□ 0.21
UBA52P62987 ZNFX1-203ENST00000371754 5235 ntTSL 1 (best) BASIC16.37■□□□□ 0.21
UBA52P62987 HOXB2-201ENST00000330070 1562 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
UBA52P62987 PCDH7-206ENST00000543491 4457 ntAPPRIS ALT2 BASIC16.37■□□□□ 0.21
UBA52P62987 MRPL4-202ENST00000307422 1320 ntAPPRIS P2 TSL 5 BASIC16.37■□□□□ 0.21
UBA52P62987 NCAN-201ENST00000252575 6387 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
UBA52P62987 PRDM5-201ENST00000264808 5330 ntAPPRIS P1 TSL 1 (best) BASIC16.37■□□□□ 0.21
UBA52P62987 NOMO2-212ENST00000622306 4252 ntAPPRIS P3 TSL 1 (best) BASIC16.37■□□□□ 0.21
Retrieved 100 of 98,524 protein–RNA pairs in 25.2 ms